RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 CNTLNQ9NXG0 1405 aa18.85■□□□□ 0.61
SMARCD3-213ENST00000489503 RRBP1Q9P2E9 1410 aaKnown RBP18.83■□□□□ 0.61
SMARCD3-213ENST00000489503 ANKRD30AQ9BXX3 1397 aa18.83■□□□□ 0.61
SMARCD3-213ENST00000489503 ITGAEP38570 1179 aa18.83■□□□□ 0.6
SMARCD3-213ENST00000489503 KDM5DQ9BY66 1539 aa18.83■□□□□ 0.6
SMARCD3-213ENST00000489503 NCOA1Q15788 1441 aa18.83■□□□□ 0.6
SMARCD3-213ENST00000489503 LMTK3Q96Q04 1460 aa18.82■□□□□ 0.6
SMARCD3-213ENST00000489503 ERBINQ96RT1 1412 aa18.82■□□□□ 0.6
SMARCD3-213ENST00000489503 CEP152O94986 1710 aa18.8■□□□□ 0.6
SMARCD3-213ENST00000489503 PREX1Q8TCU6 1659 aa18.8■□□□□ 0.6
SMARCD3-213ENST00000489503 ZMYM3Q14202 1370 aa18.79■□□□□ 0.6
SMARCD3-213ENST00000489503 ABCC3O15438 1527 aa18.79■□□□□ 0.6
SMARCD3-213ENST00000489503 PRDM15P57071 1507 aaPredicted RBP18.78■□□□□ 0.6
SMARCD3-213ENST00000489503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.78■□□□□ 0.6
SMARCD3-213ENST00000489503 DEPDC5O75140 1603 aa18.78■□□□□ 0.6
SMARCD3-213ENST00000489503 FAM135AQ9P2D6 1515 aa18.77■□□□□ 0.6
SMARCD3-213ENST00000489503 ZC3H13Q5T200 1668 aaKnown RBP18.76■□□□□ 0.59
SMARCD3-213ENST00000489503 WASHC2CQ9Y4E1 1318 aa18.74■□□□□ 0.59
SMARCD3-213ENST00000489503 CAMSAP1Q5T5Y3 1602 aa18.74■□□□□ 0.59
SMARCD3-213ENST00000489503 HSPA2P54652 639 aa18.74■□□□□ 0.59
SMARCD3-213ENST00000489503 MYO3AQ8NEV4 1616 aa18.74■□□□□ 0.59
SMARCD3-213ENST00000489503 ANKRD50Q9ULJ7 1429 aa18.74■□□□□ 0.59
SMARCD3-213ENST00000489503 PPP6R1Q9UPN7 881 aa18.73■□□□□ 0.59
SMARCD3-213ENST00000489503 ROCK1Q13464 1354 aa18.72■□□□□ 0.59
SMARCD3-213ENST00000489503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.72■□□□□ 0.59
SMARCD3-213ENST00000489503 UHRF1BP1Q6BDS2 1440 aa18.72■□□□□ 0.59
SMARCD3-213ENST00000489503 PZPP20742 1482 aa18.71■□□□□ 0.59
SMARCD3-213ENST00000489503 NPATQ14207 1427 aa18.71■□□□□ 0.59
SMARCD3-213ENST00000489503 SETD1BQ9UPS6 1966 aaKnown RBP18.7■□□□□ 0.58
SMARCD3-213ENST00000489503 FBXO31Q5XUX0 539 aaPredicted RBP18.69■□□□□ 0.58
SMARCD3-213ENST00000489503 VWDEQ8N2E2 1590 aa18.68■□□□□ 0.58
SMARCD3-213ENST00000489503 UNC13BO14795 1591 aa18.68■□□□□ 0.58
SMARCD3-213ENST00000489503 ZNF142P52746 1687 aaPredicted RBP18.66■□□□□ 0.58
SMARCD3-213ENST00000489503 GCC2Q8IWJ2 1684 aa18.66■□□□□ 0.58
SMARCD3-213ENST00000489503 CFAP65Q6ZU64 1925 aaKnown RBP18.66■□□□□ 0.58
SMARCD3-213ENST00000489503 CEP170BQ9Y4F5 1589 aaPredicted RBP18.65■□□□□ 0.58
SMARCD3-213ENST00000489503 KANK1Q14678 1352 aa18.65■□□□□ 0.58
SMARCD3-213ENST00000489503 TNRQ92752 1358 aa18.65■□□□□ 0.58
SMARCD3-213ENST00000489503 ERVK-7P63135 1459 aa18.64■□□□□ 0.57
SMARCD3-213ENST00000489503 EFCAB6Q5THR3 1501 aa18.63■□□□□ 0.57
SMARCD3-213ENST00000489503 LMTK2Q8IWU2 1503 aa18.63■□□□□ 0.57
SMARCD3-213ENST00000489503 SPATA31D1Q6ZQQ2 1576 aa18.63■□□□□ 0.57
SMARCD3-213ENST00000489503 NAIPQ13075 1403 aa18.61■□□□□ 0.57
SMARCD3-213ENST00000489503 STRCQ7RTU9 1775 aa18.59■□□□□ 0.57
SMARCD3-213ENST00000489503 TET3O43151 1660 aa18.59■□□□□ 0.57
SMARCD3-213ENST00000489503 IQGAP3Q86VI3 1631 aa18.59■□□□□ 0.57
SMARCD3-213ENST00000489503 A2ML1A8K2U0 1454 aa18.58■□□□□ 0.57
SMARCD3-213ENST00000489503 ARHGAP31Q2M1Z3 1444 aa18.58■□□□□ 0.57
SMARCD3-213ENST00000489503 HFM1A2PYH4 1435 aa18.57■□□□□ 0.56
SMARCD3-213ENST00000489503 SYNMO15061 1565 aa18.55■□□□□ 0.56
SMARCD3-213ENST00000489503 E9PCH4 1651 aa18.54■□□□□ 0.56
SMARCD3-213ENST00000489503 NLRP1Q9C000 1473 aa18.54■□□□□ 0.56
SMARCD3-213ENST00000489503 NUP155O75694 1391 aa18.54■□□□□ 0.56
SMARCD3-213ENST00000489503 UGGT1Q9NYU2 1555 aa18.51■□□□□ 0.55
SMARCD3-213ENST00000489503 PIK3C2BO00750 1634 aa18.51■□□□□ 0.55
SMARCD3-213ENST00000489503 UBR1Q8IWV7 1749 aa18.5■□□□□ 0.55
SMARCD3-213ENST00000489503 NOS1P29475 1434 aa18.49■□□□□ 0.55
SMARCD3-213ENST00000489503 PLA2R1Q13018 1463 aa18.49■□□□□ 0.55
SMARCD3-213ENST00000489503 RPRD2Q5VT52 1461 aaKnown RBP18.48■□□□□ 0.55
SMARCD3-213ENST00000489503 POLR1AO95602 1720 aaPredicted RBP18.48■□□□□ 0.55
SMARCD3-213ENST00000489503 NCKAP5LQ9HCH0 1330 aa18.48■□□□□ 0.55
SMARCD3-213ENST00000489503 NEURL4Q96JN8 1562 aa18.46■□□□□ 0.55
SMARCD3-213ENST00000489503 TRIM52Q96A61 297 aa18.43■□□□□ 0.54
SMARCD3-213ENST00000489503 ADGRB3O60242 1522 aa18.43■□□□□ 0.54
SMARCD3-213ENST00000489503 SPHKAPQ2M3C7 1700 aa18.43■□□□□ 0.54
SMARCD3-213ENST00000489503 MYO5BQ9ULV0 1848 aa18.42■□□□□ 0.54
SMARCD3-213ENST00000489503 IDI1Q13907 227 aa18.41■□□□□ 0.54
SMARCD3-213ENST00000489503 PTPRTO14522 1441 aa18.4■□□□□ 0.54
SMARCD3-213ENST00000489503 THEMISQ8N1K5 641 aaPredicted RBP18.4■□□□□ 0.54
SMARCD3-213ENST00000489503 SETD5Q9C0A6 1442 aa18.39■□□□□ 0.53
SMARCD3-213ENST00000489503 KDM5AP29375 1690 aaKnown RBP18.38■□□□□ 0.53
SMARCD3-213ENST00000489503 PKD2Q13563 968 aa18.37■□□□□ 0.53
SMARCD3-213ENST00000489503 STAG3Q9UJ98 1225 aa18.37■□□□□ 0.53
SMARCD3-213ENST00000489503 ARHGAP23Q9P227 1491 aa18.37■□□□□ 0.53
SMARCD3-213ENST00000489503 SLIT1O75093 1534 aa18.37■□□□□ 0.53
SMARCD3-213ENST00000489503 TMEM131LA2VDJ0 1609 aa18.37■□□□□ 0.53
SMARCD3-213ENST00000489503 RAB3GAP2Q9H2M9 1393 aa18.36■□□□□ 0.53
SMARCD3-213ENST00000489503 DMRT2Q9Y5R5 561 aa18.36■□□□□ 0.53
SMARCD3-213ENST00000489503 IQGAP1P46940 1657 aa18.35■□□□□ 0.53
SMARCD3-213ENST00000489503 CLTCL1P53675 1640 aa18.35■□□□□ 0.53
SMARCD3-213ENST00000489503 TRPM2O94759 1503 aa18.34■□□□□ 0.53
SMARCD3-213ENST00000489503 SCAF11Q99590 1463 aaKnown RBP18.34■□□□□ 0.53
SMARCD3-213ENST00000489503 NPHP4O75161 1426 aaPredicted RBP18.34■□□□□ 0.53
SMARCD3-213ENST00000489503 ANKLE2Q86XL3 938 aa18.34■□□□□ 0.53
SMARCD3-213ENST00000489503 SLC4A1APQ9BWU0 796 aaKnown RBP18.34■□□□□ 0.53
SMARCD3-213ENST00000489503 SLC52A1Q9NWF4 448 aa18.34■□□□□ 0.53
SMARCD3-213ENST00000489503 TMEM2Q9UHN6 1383 aa18.33■□□□□ 0.53
SMARCD3-213ENST00000489503 CHGAP10645 457 aaKnown RBP18.32■□□□□ 0.52
SMARCD3-213ENST00000489503 LTKP29376 864 aa18.32■□□□□ 0.52
SMARCD3-213ENST00000489503 FOXD1Q16676 465 aa18.32■□□□□ 0.52
SMARCD3-213ENST00000489503 MED14O60244 1454 aa18.32■□□□□ 0.52
SMARCD3-213ENST00000489503 ZNF335Q9H4Z2 1342 aaPredicted RBP18.3■□□□□ 0.52
SMARCD3-213ENST00000489503 LTBP4Q8N2S1 1624 aa18.3■□□□□ 0.52
SMARCD3-213ENST00000489503 TXNDC2Q86VQ3 553 aa18.29■□□□□ 0.52
SMARCD3-213ENST00000489503 SENP3Q9H4L4 574 aaPredicted RBP18.29■□□□□ 0.52
SMARCD3-213ENST00000489503 ZFYVE9O95405 1425 aa18.28■□□□□ 0.52
SMARCD3-213ENST00000489503 RIMS2Q9UQ26 1411 aa18.27■□□□□ 0.52
SMARCD3-213ENST00000489503 MPHOSPH9Q99550 1183 aa18.27■□□□□ 0.52
SMARCD3-213ENST00000489503 EID1Q9Y6B2 187 aa18.25■□□□□ 0.51
SMARCD3-213ENST00000489503 KIF1BO60333 1816 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms