RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 CEP170BQ9Y4F5 1589 aaPredicted RBP21.1■□□□□ 0.97
LINC00173-204ENST00000489452 TNRQ92752 1358 aa21.09■□□□□ 0.97
LINC00173-204ENST00000489452 A2ML1A8K2U0 1454 aa21.06■□□□□ 0.96
LINC00173-204ENST00000489452 PLA2R1Q13018 1463 aa21.06■□□□□ 0.96
LINC00173-204ENST00000489452 UBAP1LF5GYI3 381 aa21.05■□□□□ 0.96
LINC00173-204ENST00000489452 APLP2Q06481 763 aa21.05■□□□□ 0.96
LINC00173-204ENST00000489452 ARHGEF5Q12774 1597 aa21.05■□□□□ 0.96
LINC00173-204ENST00000489452 TCOF1Q13428 1488 aaKnown RBP21.04■□□□□ 0.96
LINC00173-204ENST00000489452 ZNF142P52746 1687 aaPredicted RBP21.03■□□□□ 0.96
LINC00173-204ENST00000489452 DISP3Q9P2K9 1392 aa21.03■□□□□ 0.96
LINC00173-204ENST00000489452 KDM5DQ9BY66 1539 aa21.02■□□□□ 0.96
LINC00173-204ENST00000489452 PZPP20742 1482 aa21.01■□□□□ 0.95
LINC00173-204ENST00000489452 DNMT1P26358 1616 aaKnown RBP21.01■□□□□ 0.95
LINC00173-204ENST00000489452 ANKLE2Q86XL3 938 aa21.01■□□□□ 0.95
LINC00173-204ENST00000489452 THEMISQ8N1K5 641 aaPredicted RBP21.01■□□□□ 0.95
LINC00173-204ENST00000489452 MIA2Q96PC5 1412 aa21.01■□□□□ 0.95
LINC00173-204ENST00000489452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21■□□□□ 0.95
LINC00173-204ENST00000489452 MYOM3Q5VTT5 1437 aa21■□□□□ 0.95
LINC00173-204ENST00000489452 MAP3K1Q13233 1512 aa20.99■□□□□ 0.95
LINC00173-204ENST00000489452 IQSEC2Q5JU85 1478 aa20.97■□□□□ 0.95
LINC00173-204ENST00000489452 RRP7BPQ9NSQ0 103 aa20.97■□□□□ 0.95
LINC00173-204ENST00000489452 ILDR2Q71H61 639 aa20.95■□□□□ 0.94
LINC00173-204ENST00000489452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.94
LINC00173-204ENST00000489452 FAM135AQ9P2D6 1515 aa20.94■□□□□ 0.94
LINC00173-204ENST00000489452 SCAF1Q9H7N4 1312 aaKnown RBP20.93■□□□□ 0.94
LINC00173-204ENST00000489452 CHIC2Q9UKJ5 165 aa20.92■□□□□ 0.94
LINC00173-204ENST00000489452 MAST1Q9Y2H9 1570 aa20.92■□□□□ 0.94
LINC00173-204ENST00000489452 ABCC3O15438 1527 aa20.91■□□□□ 0.94
LINC00173-204ENST00000489452 PIP4K2BP78356 416 aa20.91■□□□□ 0.94
LINC00173-204ENST00000489452 NLRP1Q9C000 1473 aa20.91■□□□□ 0.94
LINC00173-204ENST00000489452 UGGT1Q9NYU2 1555 aa20.9■□□□□ 0.94
LINC00173-204ENST00000489452 ABCC5O15440 1437 aa20.89■□□□□ 0.94
LINC00173-204ENST00000489452 KIF15Q9NS87 1388 aa20.89■□□□□ 0.93
LINC00173-204ENST00000489452 CFAP65Q6ZU64 1925 aaKnown RBP20.88■□□□□ 0.93
LINC00173-204ENST00000489452 RNF17Q9BXT8 1623 aaKnown RBP20.88■□□□□ 0.93
LINC00173-204ENST00000489452 NEURL4Q96JN8 1562 aa20.87■□□□□ 0.93
LINC00173-204ENST00000489452 DUOX2Q9NRD8 1548 aa20.87■□□□□ 0.93
LINC00173-204ENST00000489452 SHANK2Q9UPX8 1470 aa20.87■□□□□ 0.93
LINC00173-204ENST00000489452 NPHP4O75161 1426 aaPredicted RBP20.87■□□□□ 0.93
LINC00173-204ENST00000489452 POLR1AO95602 1720 aaPredicted RBP20.85■□□□□ 0.93
LINC00173-204ENST00000489452 TOM1O60784 492 aa20.85■□□□□ 0.93
LINC00173-204ENST00000489452 ERVK-7P63135 1459 aa20.85■□□□□ 0.93
LINC00173-204ENST00000489452 PTPN23Q9H3S7 1636 aa20.83■□□□□ 0.93
LINC00173-204ENST00000489452 EIF2AK4Q9P2K8 1649 aaKnown RBP20.83■□□□□ 0.93
LINC00173-204ENST00000489452 MROH1Q8NDA8 1641 aa20.82■□□□□ 0.92
LINC00173-204ENST00000489452 DAPK1P53355 1430 aa20.82■□□□□ 0.92
LINC00173-204ENST00000489452 FGD6Q6ZV73 1430 aa20.82■□□□□ 0.92
LINC00173-204ENST00000489452 CEP152O94986 1710 aa20.81■□□□□ 0.92
LINC00173-204ENST00000489452 SPATA31D1Q6ZQQ2 1576 aa20.81■□□□□ 0.92
LINC00173-204ENST00000489452 HSPA1LP34931 641 aa20.81■□□□□ 0.92
LINC00173-204ENST00000489452 FAM50AQ14320 339 aaKnown RBP20.81■□□□□ 0.92
LINC00173-204ENST00000489452 TXNDC2Q86VQ3 553 aa20.81■□□□□ 0.92
LINC00173-204ENST00000489452 CPS1P31327 1500 aa20.8■□□□□ 0.92
LINC00173-204ENST00000489452 MED14O60244 1454 aa20.8■□□□□ 0.92
LINC00173-204ENST00000489452 ZC3H13Q5T200 1668 aaKnown RBP20.8■□□□□ 0.92
LINC00173-204ENST00000489452 LTKP29376 864 aa20.79■□□□□ 0.92
LINC00173-204ENST00000489452 STAG3Q9UJ98 1225 aa20.79■□□□□ 0.92
LINC00173-204ENST00000489452 KANK1Q14678 1352 aa20.78■□□□□ 0.92
LINC00173-204ENST00000489452 ANKRD30AQ9BXX3 1397 aa20.78■□□□□ 0.92
LINC00173-204ENST00000489452 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
LINC00173-204ENST00000489452 ERBINQ96RT1 1412 aa20.78■□□□□ 0.92
LINC00173-204ENST00000489452 VWDEQ8N2E2 1590 aa20.77■□□□□ 0.92
LINC00173-204ENST00000489452 SOCS7O14512 581 aa20.77■□□□□ 0.92
LINC00173-204ENST00000489452 DEPDC5O75140 1603 aa20.76■□□□□ 0.91
LINC00173-204ENST00000489452 EID1Q9Y6B2 187 aa20.76■□□□□ 0.91
LINC00173-204ENST00000489452 ARHGAP31Q2M1Z3 1444 aa20.74■□□□□ 0.91
LINC00173-204ENST00000489452 CROCC2H7BZ55 1655 aa20.73■□□□□ 0.91
LINC00173-204ENST00000489452 IQGAP1P46940 1657 aa20.73■□□□□ 0.91
LINC00173-204ENST00000489452 IDI1Q13907 227 aa20.73■□□□□ 0.91
LINC00173-204ENST00000489452 SCAF11Q99590 1463 aaKnown RBP20.71■□□□□ 0.91
LINC00173-204ENST00000489452 PRDM15P57071 1507 aaPredicted RBP20.71■□□□□ 0.91
LINC00173-204ENST00000489452 UBR1Q8IWV7 1749 aa20.7■□□□□ 0.9
LINC00173-204ENST00000489452 LRRC7Q96NW7 1537 aa20.68■□□□□ 0.9
LINC00173-204ENST00000489452 TMEM2Q9UHN6 1383 aa20.66■□□□□ 0.9
LINC00173-204ENST00000489452 ARHGAP23Q9P227 1491 aa20.66■□□□□ 0.9
LINC00173-204ENST00000489452 STRCP1A6NGW2 1772 aa20.66■□□□□ 0.9
LINC00173-204ENST00000489452 BCANQ96GW7 911 aa20.65■□□□□ 0.9
LINC00173-204ENST00000489452 SLC26A8Q96RN1 970 aa20.65■□□□□ 0.9
LINC00173-204ENST00000489452 SLIT1O75093 1534 aa20.64■□□□□ 0.9
LINC00173-204ENST00000489452 PPARGC1BQ86YN6 1023 aaKnown RBP20.64■□□□□ 0.89
LINC00173-204ENST00000489452 PIK3C2BO00750 1634 aa20.64■□□□□ 0.89
LINC00173-204ENST00000489452 ANKRD50Q9ULJ7 1429 aa20.61■□□□□ 0.89
LINC00173-204ENST00000489452 ALKQ9UM73 1620 aa20.61■□□□□ 0.89
LINC00173-204ENST00000489452 SLC52A1Q9NWF4 448 aa20.61■□□□□ 0.89
LINC00173-204ENST00000489452 LMTK2Q8IWU2 1503 aa20.61■□□□□ 0.89
LINC00173-204ENST00000489452 ITGAEP38570 1179 aa20.6■□□□□ 0.89
LINC00173-204ENST00000489452 RBM33Q96EV2 1170 aaKnown RBP20.6■□□□□ 0.89
LINC00173-204ENST00000489452 ADGRL2O95490 1459 aa20.6■□□□□ 0.89
LINC00173-204ENST00000489452 EFCAB6Q5THR3 1501 aa20.58■□□□□ 0.89
LINC00173-204ENST00000489452 PROSER2Q86WR7 435 aaPredicted RBP20.58■□□□□ 0.89
LINC00173-204ENST00000489452 NOS1P29475 1434 aa20.58■□□□□ 0.88
LINC00173-204ENST00000489452 SYNMO15061 1565 aa20.57■□□□□ 0.88
LINC00173-204ENST00000489452 CHGAP10645 457 aaKnown RBP20.57■□□□□ 0.88
LINC00173-204ENST00000489452 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
LINC00173-204ENST00000489452 KCNA6P17658 529 aa20.56■□□□□ 0.88
LINC00173-204ENST00000489452 MED1Q15648 1581 aaPredicted RBP20.54■□□□□ 0.88
LINC00173-204ENST00000489452 PPP1R15AO75807 674 aaPredicted RBP20.53■□□□□ 0.88
LINC00173-204ENST00000489452 TMEM94Q12767 1356 aa20.53■□□□□ 0.88
LINC00173-204ENST00000489452 NUTM2DQ5VT03 806 aaPredicted RBP20.51■□□□□ 0.87
LINC00173-204ENST00000489452 HDGFP51858 240 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms