RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 TCOF1Q13428 1488 aaKnown RBP18.93■□□□□ 0.62
SFXN3-207ENST00000489434 ZNF335Q9H4Z2 1342 aaPredicted RBP18.93■□□□□ 0.62
SFXN3-207ENST00000489434 WASHC2CQ9Y4E1 1318 aa18.93■□□□□ 0.62
SFXN3-207ENST00000489434 TNRQ92752 1358 aa18.92■□□□□ 0.62
SFXN3-207ENST00000489434 KDM5DQ9BY66 1539 aa18.91■□□□□ 0.62
SFXN3-207ENST00000489434 ARHGEF5Q12774 1597 aa18.9■□□□□ 0.62
SFXN3-207ENST00000489434 UBAP1LF5GYI3 381 aa18.89■□□□□ 0.61
SFXN3-207ENST00000489434 PZPP20742 1482 aa18.89■□□□□ 0.61
SFXN3-207ENST00000489434 DNMT1P26358 1616 aaKnown RBP18.89■□□□□ 0.61
SFXN3-207ENST00000489434 FBXO31Q5XUX0 539 aaPredicted RBP18.88■□□□□ 0.61
SFXN3-207ENST00000489434 VPS8Q8N3P4 1428 aa18.88■□□□□ 0.61
SFXN3-207ENST00000489434 LRRC9Q6ZRR7 1453 aa18.87■□□□□ 0.61
SFXN3-207ENST00000489434 THEMISQ8N1K5 641 aaPredicted RBP18.85■□□□□ 0.61
SFXN3-207ENST00000489434 ANKLE2Q86XL3 938 aa18.84■□□□□ 0.61
SFXN3-207ENST00000489434 POLR1AO95602 1720 aaPredicted RBP18.83■□□□□ 0.61
SFXN3-207ENST00000489434 SPATA31D1Q6ZQQ2 1576 aa18.83■□□□□ 0.6
SFXN3-207ENST00000489434 NLRP1Q9C000 1473 aa18.83■□□□□ 0.6
SFXN3-207ENST00000489434 MIA2Q96PC5 1412 aa18.83■□□□□ 0.6
SFXN3-207ENST00000489434 LOC105371045A0A1W2PR82 267 aa18.82■□□□□ 0.6
SFXN3-207ENST00000489434 MAP3K1Q13233 1512 aa18.81■□□□□ 0.6
SFXN3-207ENST00000489434 MAST1Q9Y2H9 1570 aa18.8■□□□□ 0.6
SFXN3-207ENST00000489434 ILDR2Q71H61 639 aa18.79■□□□□ 0.6
SFXN3-207ENST00000489434 UGGT1Q9NYU2 1555 aa18.79■□□□□ 0.6
SFXN3-207ENST00000489434 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.79■□□□□ 0.6
SFXN3-207ENST00000489434 RNF17Q9BXT8 1623 aaKnown RBP18.78■□□□□ 0.6
SFXN3-207ENST00000489434 MYOM3Q5VTT5 1437 aa18.78■□□□□ 0.6
SFXN3-207ENST00000489434 ZC3H13Q5T200 1668 aaKnown RBP18.78■□□□□ 0.6
SFXN3-207ENST00000489434 CPS1P31327 1500 aa18.78■□□□□ 0.6
SFXN3-207ENST00000489434 APLP2Q06481 763 aa18.77■□□□□ 0.6
SFXN3-207ENST00000489434 EIF2AK4Q9P2K8 1649 aaKnown RBP18.77■□□□□ 0.6
SFXN3-207ENST00000489434 SHANK2Q9UPX8 1470 aa18.77■□□□□ 0.59
SFXN3-207ENST00000489434 NEURL4Q96JN8 1562 aa18.76■□□□□ 0.59
SFXN3-207ENST00000489434 SOCS7O14512 581 aa18.76■□□□□ 0.59
SFXN3-207ENST00000489434 TOM1O60784 492 aa18.76■□□□□ 0.59
SFXN3-207ENST00000489434 KANK4Q5T7N3 995 aaPredicted RBP18.76■□□□□ 0.59
SFXN3-207ENST00000489434 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
SFXN3-207ENST00000489434 ABCC3O15438 1527 aa18.75■□□□□ 0.59
SFXN3-207ENST00000489434 DEPDC5O75140 1603 aa18.74■□□□□ 0.59
SFXN3-207ENST00000489434 NPHP4O75161 1426 aaPredicted RBP18.74■□□□□ 0.59
SFXN3-207ENST00000489434 DUOX2Q9NRD8 1548 aa18.72■□□□□ 0.59
SFXN3-207ENST00000489434 MED14O60244 1454 aa18.71■□□□□ 0.59
SFXN3-207ENST00000489434 PIP4K2BP78356 416 aa18.71■□□□□ 0.59
SFXN3-207ENST00000489434 ERVK-7P63135 1459 aa18.7■□□□□ 0.58
SFXN3-207ENST00000489434 CFAP65Q6ZU64 1925 aaKnown RBP18.69■□□□□ 0.58
SFXN3-207ENST00000489434 IQGAP1P46940 1657 aa18.69■□□□□ 0.58
SFXN3-207ENST00000489434 KIF15Q9NS87 1388 aa18.68■□□□□ 0.58
SFXN3-207ENST00000489434 VWDEQ8N2E2 1590 aa18.68■□□□□ 0.58
SFXN3-207ENST00000489434 CEP152O94986 1710 aa18.67■□□□□ 0.58
SFXN3-207ENST00000489434 MROH1Q8NDA8 1641 aa18.67■□□□□ 0.58
SFXN3-207ENST00000489434 RRP7BPQ9NSQ0 103 aa18.66■□□□□ 0.58
SFXN3-207ENST00000489434 ERBINQ96RT1 1412 aa18.66■□□□□ 0.58
SFXN3-207ENST00000489434 HSPA1LP34931 641 aa18.65■□□□□ 0.58
SFXN3-207ENST00000489434 KANK1Q14678 1352 aa18.65■□□□□ 0.58
SFXN3-207ENST00000489434 PTPN23Q9H3S7 1636 aa18.64■□□□□ 0.57
SFXN3-207ENST00000489434 ABCC5O15440 1437 aa18.64■□□□□ 0.57
SFXN3-207ENST00000489434 CROCC2H7BZ55 1655 aa18.63■□□□□ 0.57
SFXN3-207ENST00000489434 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.63■□□□□ 0.577e-6■□□□□ 10.8
SFXN3-207ENST00000489434 ARHGAP31Q2M1Z3 1444 aa18.63■□□□□ 0.57
SFXN3-207ENST00000489434 EID1Q9Y6B2 187 aa18.62■□□□□ 0.57
SFXN3-207ENST00000489434 PRDM15P57071 1507 aaPredicted RBP18.62■□□□□ 0.57
SFXN3-207ENST00000489434 UBR1Q8IWV7 1749 aa18.62■□□□□ 0.57
SFXN3-207ENST00000489434 SCAF11Q99590 1463 aaKnown RBP18.61■□□□□ 0.57
SFXN3-207ENST00000489434 DAPK1P53355 1430 aa18.6■□□□□ 0.57
SFXN3-207ENST00000489434 ANKRD30AQ9BXX3 1397 aa18.6■□□□□ 0.57
SFXN3-207ENST00000489434 TXNDC2Q86VQ3 553 aa18.6■□□□□ 0.57
SFXN3-207ENST00000489434 FGD6Q6ZV73 1430 aa18.59■□□□□ 0.57
SFXN3-207ENST00000489434 STAG3Q9UJ98 1225 aa18.59■□□□□ 0.57
SFXN3-207ENST00000489434 SYNMO15061 1565 aa18.58■□□□□ 0.56
SFXN3-207ENST00000489434 SLIT1O75093 1534 aa18.57■□□□□ 0.56
SFXN3-207ENST00000489434 LRRC7Q96NW7 1537 aa18.57■□□□□ 0.56
SFXN3-207ENST00000489434 CHIC2Q9UKJ5 165 aa18.56■□□□□ 0.56
SFXN3-207ENST00000489434 STRCP1A6NGW2 1772 aa18.55■□□□□ 0.56
SFXN3-207ENST00000489434 ARHGAP23Q9P227 1491 aa18.55■□□□□ 0.56
SFXN3-207ENST00000489434 LTKP29376 864 aa18.55■□□□□ 0.56
SFXN3-207ENST00000489434 MED1Q15648 1581 aaPredicted RBP18.55■□□□□ 0.56
SFXN3-207ENST00000489434 TMEM2Q9UHN6 1383 aa18.53■□□□□ 0.56
SFXN3-207ENST00000489434 PHF23Q9BUL5 403 aaPredicted RBP18.52■□□□□ 0.56
SFXN3-207ENST00000489434 PIK3C2BO00750 1634 aa18.52■□□□□ 0.55
SFXN3-207ENST00000489434 ALKQ9UM73 1620 aa18.51■□□□□ 0.55
SFXN3-207ENST00000489434 KDM5AP29375 1690 aaKnown RBP18.5■□□□□ 0.55
SFXN3-207ENST00000489434 EFCAB6Q5THR3 1501 aa18.5■□□□□ 0.55
SFXN3-207ENST00000489434 LMTK2Q8IWU2 1503 aa18.5■□□□□ 0.55
SFXN3-207ENST00000489434 IDI1Q13907 227 aa18.49■□□□□ 0.55
SFXN3-207ENST00000489434 FAM50AQ14320 339 aaKnown RBP18.49■□□□□ 0.55
SFXN3-207ENST00000489434 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
SFXN3-207ENST00000489434 SLC52A1Q9NWF4 448 aa18.46■□□□□ 0.55
SFXN3-207ENST00000489434 ADGRL2O95490 1459 aa18.46■□□□□ 0.54
SFXN3-207ENST00000489434 NOS1P29475 1434 aa18.43■□□□□ 0.54
SFXN3-207ENST00000489434 ANKRD50Q9ULJ7 1429 aa18.43■□□□□ 0.54
SFXN3-207ENST00000489434 KCNA6P17658 529 aa18.43■□□□□ 0.54
SFXN3-207ENST00000489434 BCANQ96GW7 911 aa18.43■□□□□ 0.54
SFXN3-207ENST00000489434 RPRD2Q5VT52 1461 aaKnown RBP18.42■□□□□ 0.54
SFXN3-207ENST00000489434 ADGRB3O60242 1522 aa18.42■□□□□ 0.54
SFXN3-207ENST00000489434 HDGFP51858 240 aaKnown RBP18.41■□□□□ 0.54
SFXN3-207ENST00000489434 PROSER2Q86WR7 435 aaPredicted RBP18.41■□□□□ 0.54
SFXN3-207ENST00000489434 SLC26A8Q96RN1 970 aa18.41■□□□□ 0.54
SFXN3-207ENST00000489434 XIRP1Q702N8 1843 aaKnown RBP18.41■□□□□ 0.54
SFXN3-207ENST00000489434 TMEM94Q12767 1356 aa18.4■□□□□ 0.54
SFXN3-207ENST00000489434 FAM135BQ49AJ0 1406 aa18.38■□□□□ 0.53
SFXN3-207ENST00000489434 TET3O43151 1660 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms