RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 TRHP20396 242 aaPredicted RBP26.16■■□□□ 1.78
CD40-206ENST00000489304 ANKRD30BQ9BXX2 1392 aa26.15■■□□□ 1.78
CD40-206ENST00000489304 ABCA6Q8N139 1617 aa26.15■■□□□ 1.78
CD40-206ENST00000489304 PKD2Q13563 968 aa26.14■■□□□ 1.78
CD40-206ENST00000489304 A2MP01023 1474 aa26.14■■□□□ 1.77
CD40-206ENST00000489304 YEATS2Q9ULM3 1422 aa26.13■■□□□ 1.77
CD40-206ENST00000489304 KIF3BO15066 747 aa26.11■■□□□ 1.77
CD40-206ENST00000489304 FAM135AQ9P2D6 1515 aa26.11■■□□□ 1.77
CD40-206ENST00000489304 MAGI2Q86UL8 1455 aa26.11■■□□□ 1.77
CD40-206ENST00000489304 DIP2CQ9Y2E4 1556 aa26.1■■□□□ 1.77
CD40-206ENST00000489304 TONSLQ96HA7 1378 aa26.09■■□□□ 1.77
CD40-206ENST00000489304 IQGAP3Q86VI3 1631 aa26.09■■□□□ 1.77
CD40-206ENST00000489304 ZMYM4Q5VZL5 1548 aa26.08■■□□□ 1.77
CD40-206ENST00000489304 ZNF316A6NFI3 1004 aaPredicted RBP26.05■■□□□ 1.76
CD40-206ENST00000489304 EIF2AK4Q9P2K8 1649 aaKnown RBP26.05■■□□□ 1.76
CD40-206ENST00000489304 RPRD2Q5VT52 1461 aaKnown RBP26.05■■□□□ 1.76
CD40-206ENST00000489304 PPP1R15AO75807 674 aaPredicted RBP26.05■■□□□ 1.76
CD40-206ENST00000489304 DEPDC5O75140 1603 aa26.03■■□□□ 1.76
CD40-206ENST00000489304 MROH1Q8NDA8 1641 aa26.02■■□□□ 1.76
CD40-206ENST00000489304 VWDEQ8N2E2 1590 aa25.97■■□□□ 1.75
CD40-206ENST00000489304 PRDM15P57071 1507 aaPredicted RBP25.96■■□□□ 1.75
CD40-206ENST00000489304 GGT6Q6P531 493 aa25.96■■□□□ 1.75
CD40-206ENST00000489304 ATP10AO60312 1499 aa25.95■■□□□ 1.75
CD40-206ENST00000489304 RNF17Q9BXT8 1623 aaKnown RBP25.95■■□□□ 1.75
CD40-206ENST00000489304 KANK1Q14678 1352 aa25.94■■□□□ 1.74
CD40-206ENST00000489304 BCORL1Q5H9F3 1711 aa25.92■■□□□ 1.74
CD40-206ENST00000489304 PLA2R1Q13018 1463 aa25.91■■□□□ 1.74
CD40-206ENST00000489304 L3MBTL2Q969R5 705 aa25.88■■□□□ 1.73
CD40-206ENST00000489304 E9PCH4 1651 aa25.88■■□□□ 1.73
CD40-206ENST00000489304 ARHGEF40Q8TER5 1519 aa25.87■■□□□ 1.73
CD40-206ENST00000489304 TET3O43151 1660 aa25.87■■□□□ 1.73
CD40-206ENST00000489304 SIGLEC1Q9BZZ2 1709 aa25.86■■□□□ 1.73
CD40-206ENST00000489304 CEP152O94986 1710 aa25.85■■□□□ 1.73
CD40-206ENST00000489304 REREQ9P2R6 1566 aa25.85■■□□□ 1.73
CD40-206ENST00000489304 LMTK2Q8IWU2 1503 aa25.84■■□□□ 1.73
CD40-206ENST00000489304 ABCC3O15438 1527 aa25.81■■□□□ 1.72
CD40-206ENST00000489304 WASHC2CQ9Y4E1 1318 aa25.81■■□□□ 1.72
CD40-206ENST00000489304 AGLP35573 1532 aa25.8■■□□□ 1.72
CD40-206ENST00000489304 EFCAB6Q5THR3 1501 aa25.8■■□□□ 1.72
CD40-206ENST00000489304 CCDC144AA2RUR9 1427 aa25.78■■□□□ 1.72
CD40-206ENST00000489304 PTPRTO14522 1441 aa25.77■■□□□ 1.72
CD40-206ENST00000489304 DIEXFQ68CQ4 756 aaKnown RBP25.77■■□□□ 1.72
CD40-206ENST00000489304 MLECQ14165 292 aa25.76■■□□□ 1.71
CD40-206ENST00000489304 SPHKAPQ2M3C7 1700 aa25.76■■□□□ 1.71
CD40-206ENST00000489304 NPATQ14207 1427 aa25.73■■□□□ 1.71
CD40-206ENST00000489304 TRPM2O94759 1503 aa25.72■■□□□ 1.71
CD40-206ENST00000489304 CAMSAP1Q5T5Y3 1602 aa25.71■■□□□ 1.71
CD40-206ENST00000489304 NBPF8Q3BBV2 869 aa25.69■■□□□ 1.7
CD40-206ENST00000489304 CLTCL1P53675 1640 aa25.68■■□□□ 1.7
CD40-206ENST00000489304 ARID4BQ4LE39 1312 aaPredicted RBP25.68■■□□□ 1.7
CD40-206ENST00000489304 UHRF1BP1Q6BDS2 1440 aa25.67■■□□□ 1.7
CD40-206ENST00000489304 RGL3Q3MIN7 710 aa25.67■■□□□ 1.7
CD40-206ENST00000489304 UGGT1Q9NYU2 1555 aa25.67■■□□□ 1.7
CD40-206ENST00000489304 ZC3H13Q5T200 1668 aaKnown RBP25.67■■□□□ 1.7
CD40-206ENST00000489304 ARHGAP31Q2M1Z3 1444 aa25.63■■□□□ 1.69
CD40-206ENST00000489304 KDM2AQ9Y2K7 1162 aa25.63■■□□□ 1.69
CD40-206ENST00000489304 DCAF11Q8TEB1 546 aa25.62■■□□□ 1.69
CD40-206ENST00000489304 PPP6R1Q9UPN7 881 aa25.62■■□□□ 1.69
CD40-206ENST00000489304 SPATA31E1Q6ZUB1 1445 aa25.61■■□□□ 1.69
CD40-206ENST00000489304 CFAP65Q6ZU64 1925 aaKnown RBP25.61■■□□□ 1.69
CD40-206ENST00000489304 CLTCQ00610 1675 aaKnown RBP25.6■■□□□ 1.69
CD40-206ENST00000489304 NOS1P29475 1434 aa25.6■■□□□ 1.69
CD40-206ENST00000489304 ZNF326Q5BKZ1 582 aaKnown RBP25.59■■□□□ 1.69
CD40-206ENST00000489304 FBXO31Q5XUX0 539 aaPredicted RBP25.58■■□□□ 1.69
CD40-206ENST00000489304 CNTLNQ9NXG0 1405 aa25.58■■□□□ 1.69
CD40-206ENST00000489304 NEURL4Q96JN8 1562 aa25.57■■□□□ 1.68
CD40-206ENST00000489304 SYNMO15061 1565 aa25.56■■□□□ 1.68
CD40-206ENST00000489304 RALGAPBQ86X10 1494 aa25.56■■□□□ 1.68
CD40-206ENST00000489304 KIF1BO60333 1816 aa25.53■■□□□ 1.68
CD40-206ENST00000489304 EIF4G2P78344 907 aaKnown RBP eCLIP25.53■■□□□ 1.68
CD40-206ENST00000489304 PREX1Q8TCU6 1659 aa25.51■■□□□ 1.68
CD40-206ENST00000489304 HSPA5P11021 654 aaKnown RBP25.51■■□□□ 1.68
CD40-206ENST00000489304 HIRIP3Q9BW71 556 aaPredicted RBP25.51■■□□□ 1.68
CD40-206ENST00000489304 CHGAP10645 457 aaKnown RBP25.51■■□□□ 1.67
CD40-206ENST00000489304 PRAG1Q86YV5 1406 aa25.51■■□□□ 1.67
CD40-206ENST00000489304 ESF1Q9H501 851 aaKnown RBP25.51■■□□□ 1.67
CD40-206ENST00000489304 ERVK-7P63135 1459 aa25.5■■□□□ 1.67
CD40-206ENST00000489304 TRPM1Q7Z4N2 1603 aa25.49■■□□□ 1.67
CD40-206ENST00000489304 MROH2AA6NES4 1674 aa25.49■■□□□ 1.67
CD40-206ENST00000489304 ZMYM3Q14202 1370 aa25.49■■□□□ 1.67
CD40-206ENST00000489304 IDI1Q13907 227 aa25.48■■□□□ 1.67
CD40-206ENST00000489304 PIK3C2BO00750 1634 aa25.47■■□□□ 1.67
CD40-206ENST00000489304 ADGRB3O60242 1522 aa25.46■■□□□ 1.67
CD40-206ENST00000489304 STAC3Q96MF2 364 aa25.45■■□□□ 1.66
CD40-206ENST00000489304 SLC52A1Q9NWF4 448 aa25.42■■□□□ 1.66
CD40-206ENST00000489304 SPATA31D1Q6ZQQ2 1576 aa25.42■■□□□ 1.66
CD40-206ENST00000489304 IFT172Q9UG01 1749 aa25.41■■□□□ 1.66
CD40-206ENST00000489304 LAMC1P11047 1609 aa25.41■■□□□ 1.66
CD40-206ENST00000489304 MADDQ8WXG6 1647 aa25.41■■□□□ 1.66
CD40-206ENST00000489304 POLR1AO95602 1720 aaPredicted RBP25.41■■□□□ 1.66
CD40-206ENST00000489304 CEBPAP49715 358 aaPredicted RBP25.39■■□□□ 1.65
CD40-206ENST00000489304 USP47Q96K76 1375 aa25.39■■□□□ 1.65
CD40-206ENST00000489304 NBPF1Q3BBV0 1214 aa25.37■■□□□ 1.65
CD40-206ENST00000489304 GPRASP1Q5JY77 1395 aa25.37■■□□□ 1.65
CD40-206ENST00000489304 ADGRF5Q8IZF2 1346 aa25.36■■□□□ 1.65
CD40-206ENST00000489304 CARD11Q9BXL7 1154 aa25.36■■□□□ 1.65
CD40-206ENST00000489304 MIER1Q8N108 512 aa25.35■■□□□ 1.65
CD40-206ENST00000489304 ROCK2O75116 1388 aaKnown RBP25.35■■□□□ 1.65
CD40-206ENST00000489304 MYOM2P54296 1465 aa25.35■■□□□ 1.65
CD40-206ENST00000489304 DDX10Q13206 875 aaKnown RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms