RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 WASHC2CQ9Y4E1 1318 aa36.97■■■■□ 3.51
PTPN18-213ENST00000489215 HSPA2P54652 639 aa36.97■■■■□ 3.51
PTPN18-213ENST00000489215 FAM50AQ14320 339 aaKnown RBP36.97■■■■□ 3.51
PTPN18-213ENST00000489215 KDM5DQ9BY66 1539 aa36.95■■■■□ 3.5
PTPN18-213ENST00000489215 ANKRD30AQ9BXX3 1397 aa36.94■■■■□ 3.5
PTPN18-213ENST00000489215 KIF15Q9NS87 1388 aa36.94■■■■□ 3.5
PTPN18-213ENST00000489215 RRP7BPQ9NSQ0 103 aa36.91■■■■□ 3.5
PTPN18-213ENST00000489215 RNF17Q9BXT8 1623 aaKnown RBP36.91■■■■□ 3.5
PTPN18-213ENST00000489215 ERBINQ96RT1 1412 aa36.9■■■■□ 3.5
PTPN18-213ENST00000489215 PTPRKQ15262 1439 aa36.88■■■■□ 3.49
PTPN18-213ENST00000489215 CHIC2Q9UKJ5 165 aa36.86■■■■□ 3.49
PTPN18-213ENST00000489215 NCOA1Q15788 1441 aa36.84■■■■□ 3.49
PTPN18-213ENST00000489215 ZC3H13Q5T200 1668 aaKnown RBP36.83■■■■□ 3.49
PTPN18-213ENST00000489215 DMRT2Q9Y5R5 561 aa36.82■■■■□ 3.48
PTPN18-213ENST00000489215 ADGRL2O95490 1459 aa36.82■■■■□ 3.48
PTPN18-213ENST00000489215 PZPP20742 1482 aa36.81■■■■□ 3.48
PTPN18-213ENST00000489215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.78■■■■□ 3.48
PTPN18-213ENST00000489215 PPARGC1BQ86YN6 1023 aaKnown RBP36.77■■■■□ 3.48
PTPN18-213ENST00000489215 ABCC3O15438 1527 aa36.74■■■■□ 3.47
PTPN18-213ENST00000489215 KANK1Q14678 1352 aa36.73■■■■□ 3.47
PTPN18-213ENST00000489215 MROH1Q8NDA8 1641 aa36.73■■■■□ 3.47
PTPN18-213ENST00000489215 MYO3AQ8NEV4 1616 aa36.73■■■■□ 3.47
PTPN18-213ENST00000489215 ZNF142P52746 1687 aaPredicted RBP36.71■■■■□ 3.47
PTPN18-213ENST00000489215 PRDM15P57071 1507 aaPredicted RBP36.7■■■■□ 3.47
PTPN18-213ENST00000489215 TNRQ92752 1358 aa36.7■■■■□ 3.47
PTPN18-213ENST00000489215 FBXO31Q5XUX0 539 aaPredicted RBP36.69■■■■□ 3.46
PTPN18-213ENST00000489215 DEPDC5O75140 1603 aa36.68■■■■□ 3.46
PTPN18-213ENST00000489215 CEP170BQ9Y4F5 1589 aaPredicted RBP36.68■■■■□ 3.46
PTPN18-213ENST00000489215 STRCQ7RTU9 1775 aa36.67■■■■□ 3.46
PTPN18-213ENST00000489215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.65■■■■□ 3.462e-8■■■□□ 14.6
PTPN18-213ENST00000489215 ROCK1Q13464 1354 aa36.65■■■■□ 3.46
PTPN18-213ENST00000489215 A2ML1A8K2U0 1454 aa36.64■■■■□ 3.46
PTPN18-213ENST00000489215 CEP152O94986 1710 aa36.63■■■■□ 3.45
PTPN18-213ENST00000489215 ANKRD50Q9ULJ7 1429 aa36.63■■■■□ 3.45
PTPN18-213ENST00000489215 CAMSAP1Q5T5Y3 1602 aa36.62■■■■□ 3.45
PTPN18-213ENST00000489215 NLRP1Q9C000 1473 aa36.61■■■■□ 3.45
PTPN18-213ENST00000489215 ARHGAP31Q2M1Z3 1444 aa36.6■■■■□ 3.45
PTPN18-213ENST00000489215 PTPRTO14522 1441 aa36.59■■■■□ 3.45
PTPN18-213ENST00000489215 PLA2R1Q13018 1463 aa36.59■■■■□ 3.45
PTPN18-213ENST00000489215 PKD2Q13563 968 aa36.58■■■■□ 3.45
PTPN18-213ENST00000489215 RRBP1Q9P2E9 1410 aaKnown RBP36.57■■■■□ 3.44
PTPN18-213ENST00000489215 SPATA31D1Q6ZQQ2 1576 aa36.57■■■■□ 3.44
PTPN18-213ENST00000489215 ITGAEP38570 1179 aa36.54■■■■□ 3.44
PTPN18-213ENST00000489215 LMTK2Q8IWU2 1503 aa36.54■■■■□ 3.44
PTPN18-213ENST00000489215 THEMISQ8N1K5 641 aaPredicted RBP36.53■■■■□ 3.44
PTPN18-213ENST00000489215 ERVK-7P63135 1459 aa36.53■■■■□ 3.44
PTPN18-213ENST00000489215 VWDEQ8N2E2 1590 aa36.52■■■■□ 3.44
PTPN18-213ENST00000489215 CFAP65Q6ZU64 1925 aaKnown RBP36.49■■■■□ 3.43
PTPN18-213ENST00000489215 UGGT1Q9NYU2 1555 aa36.46■■■■□ 3.43
PTPN18-213ENST00000489215 NCKAP5LQ9HCH0 1330 aa36.44■■■■□ 3.42
PTPN18-213ENST00000489215 ANKLE2Q86XL3 938 aa36.39■■■■□ 3.42
PTPN18-213ENST00000489215 UNC13BO14795 1591 aa36.38■■■■□ 3.41
PTPN18-213ENST00000489215 EFCAB6Q5THR3 1501 aa36.38■■■■□ 3.41
PTPN18-213ENST00000489215 RPRD2Q5VT52 1461 aaKnown RBP36.37■■■■□ 3.41
PTPN18-213ENST00000489215 CERKQ8TCT0 537 aa36.35■■■■□ 3.41
PTPN18-213ENST00000489215 ILDR1Q86SU0 546 aaPredicted RBP36.34■■■■□ 3.41
PTPN18-213ENST00000489215 FBXO41Q8TF61 875 aa36.33■■■■□ 3.41
PTPN18-213ENST00000489215 POLR1AO95602 1720 aaPredicted RBP36.33■■■■□ 3.41
PTPN18-213ENST00000489215 TET3O43151 1660 aa36.32■■■■□ 3.41
PTPN18-213ENST00000489215 SLC52A1Q9NWF4 448 aa36.28■■■■□ 3.4
PTPN18-213ENST00000489215 GCC2Q8IWJ2 1684 aa36.28■■■■□ 3.4
PTPN18-213ENST00000489215 UBR1Q8IWV7 1749 aa36.28■■■■□ 3.4
PTPN18-213ENST00000489215 NOS1P29475 1434 aa36.27■■■■□ 3.4
PTPN18-213ENST00000489215 STAG3Q9UJ98 1225 aa36.26■■■■□ 3.4
PTPN18-213ENST00000489215 NUP155O75694 1391 aa36.26■■■■□ 3.39
PTPN18-213ENST00000489215 IQGAP3Q86VI3 1631 aa36.25■■■■□ 3.39
PTPN18-213ENST00000489215 KDM5AP29375 1690 aaKnown RBP36.23■■■■□ 3.39
PTPN18-213ENST00000489215 MED14O60244 1454 aa36.22■■■■□ 3.39
PTPN18-213ENST00000489215 IDI1Q13907 227 aa36.21■■■■□ 3.39
PTPN18-213ENST00000489215 PIK3C2BO00750 1634 aa36.19■■■■□ 3.38
PTPN18-213ENST00000489215 NEURL4Q96JN8 1562 aa36.19■■■■□ 3.38
PTPN18-213ENST00000489215 NAIPQ13075 1403 aa36.18■■■■□ 3.38
PTPN18-213ENST00000489215 SYNMO15061 1565 aa36.18■■■■□ 3.38
PTPN18-213ENST00000489215 EID1Q9Y6B2 187 aa36.17■■■■□ 3.38
PTPN18-213ENST00000489215 NPHP4O75161 1426 aaPredicted RBP36.17■■■■□ 3.38
PTPN18-213ENST00000489215 LTBP4Q8N2S1 1624 aa36.16■■■■□ 3.38
PTPN18-213ENST00000489215 SLIT1O75093 1534 aa36.16■■■■□ 3.38
PTPN18-213ENST00000489215 HFM1A2PYH4 1435 aa36.15■■■■□ 3.38
PTPN18-213ENST00000489215 ARHGAP23Q9P227 1491 aa36.14■■■■□ 3.38
PTPN18-213ENST00000489215 E9PCH4 1651 aa36.13■■■■□ 3.37
PTPN18-213ENST00000489215 IQSEC2Q5JU85 1478 aa36.12■■■■□ 3.37
PTPN18-213ENST00000489215 TXNDC2Q86VQ3 553 aa36.12■■■■□ 3.37
PTPN18-213ENST00000489215 ZNF335Q9H4Z2 1342 aaPredicted RBP36.11■■■■□ 3.37
PTPN18-213ENST00000489215 TMEM2Q9UHN6 1383 aa36.11■■■■□ 3.37
PTPN18-213ENST00000489215 SCAF11Q99590 1463 aaKnown RBP36.11■■■■□ 3.37
PTPN18-213ENST00000489215 IQGAP1P46940 1657 aa36.1■■■■□ 3.37
PTPN18-213ENST00000489215 ADGRB3O60242 1522 aa36.06■■■■□ 3.36
PTPN18-213ENST00000489215 HDGFP51858 240 aaKnown RBP36.05■■■■□ 3.36
PTPN18-213ENST00000489215 LTKP29376 864 aa36.04■■■■□ 3.36
PTPN18-213ENST00000489215 ACIN1Q9UKV3 1341 aaKnown RBP36■■■■□ 3.35
PTPN18-213ENST00000489215 CPS1P31327 1500 aa35.99■■■■□ 3.35
PTPN18-213ENST00000489215 TRIM52Q96A61 297 aa35.99■■■■□ 3.35
PTPN18-213ENST00000489215 TMEM131LA2VDJ0 1609 aa35.94■■■■□ 3.34
PTPN18-213ENST00000489215 CHGAP10645 457 aaKnown RBP35.92■■■■□ 3.34
PTPN18-213ENST00000489215 SPHKAPQ2M3C7 1700 aa35.91■■■■□ 3.34
PTPN18-213ENST00000489215 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.91■■■■□ 3.34
PTPN18-213ENST00000489215 MYO5BQ9ULV0 1848 aa35.87■■■■□ 3.33
PTPN18-213ENST00000489215 SLC4A1APQ9BWU0 796 aaKnown RBP35.87■■■■□ 3.33
PTPN18-213ENST00000489215 RIMS2Q9UQ26 1411 aa35.84■■■■□ 3.33
PTPN18-213ENST00000489215 PPP1R15AO75807 674 aaPredicted RBP35.84■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms