RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 MYO3AQ8NEV4 1616 aa19.64■□□□□ 0.73
SRRM1-216ENST00000489130 ZNF142P52746 1687 aaPredicted RBP19.63■□□□□ 0.73
SRRM1-216ENST00000489130 RNF17Q9BXT8 1623 aaKnown RBP19.63■□□□□ 0.73
SRRM1-216ENST00000489130 TCOF1Q13428 1488 aaKnown RBP19.63■□□□□ 0.73
SRRM1-216ENST00000489130 NCOA1Q15788 1441 aa19.63■□□□□ 0.73
SRRM1-216ENST00000489130 EIF2AK4Q9P2K8 1649 aaKnown RBP19.62■□□□□ 0.73
SRRM1-216ENST00000489130 ABCC5O15440 1437 aa19.62■□□□□ 0.73
SRRM1-216ENST00000489130 FBXO41Q8TF61 875 aa19.62■□□□□ 0.73
SRRM1-216ENST00000489130 CROCC2H7BZ55 1655 aa19.62■□□□□ 0.73
SRRM1-216ENST00000489130 WASHC2CQ9Y4E1 1318 aa19.61■□□□□ 0.73
SRRM1-216ENST00000489130 CEP170BQ9Y4F5 1589 aaPredicted RBP19.61■□□□□ 0.73
SRRM1-216ENST00000489130 PZPP20742 1482 aa19.6■□□□□ 0.73
SRRM1-216ENST00000489130 PTPRTO14522 1441 aa19.6■□□□□ 0.73
SRRM1-216ENST00000489130 CAMSAP1Q5T5Y3 1602 aa19.6■□□□□ 0.73
SRRM1-216ENST00000489130 DUOX2Q9NRD8 1548 aa19.6■□□□□ 0.73
SRRM1-216ENST00000489130 DAPK1P53355 1430 aa19.59■□□□□ 0.73
SRRM1-216ENST00000489130 DNMT1P26358 1616 aaKnown RBP19.59■□□□□ 0.73
SRRM1-216ENST00000489130 PHF23Q9BUL5 403 aaPredicted RBP19.59■□□□□ 0.73
SRRM1-216ENST00000489130 PLA2R1Q13018 1463 aa19.57■□□□□ 0.72
SRRM1-216ENST00000489130 KIF15Q9NS87 1388 aa19.57■□□□□ 0.72
SRRM1-216ENST00000489130 ABCC3O15438 1527 aa19.56■□□□□ 0.72
SRRM1-216ENST00000489130 ZC3H13Q5T200 1668 aaKnown RBP19.56■□□□□ 0.72
SRRM1-216ENST00000489130 MROH1Q8NDA8 1641 aa19.56■□□□□ 0.72
SRRM1-216ENST00000489130 A2ML1A8K2U0 1454 aa19.55■□□□□ 0.72
SRRM1-216ENST00000489130 ERBINQ96RT1 1412 aa19.55■□□□□ 0.72
SRRM1-216ENST00000489130 TNRQ92752 1358 aa19.55■□□□□ 0.72
SRRM1-216ENST00000489130 FBXO31Q5XUX0 539 aaPredicted RBP19.54■□□□□ 0.72
SRRM1-216ENST00000489130 CERKQ8TCT0 537 aa19.54■□□□□ 0.72
SRRM1-216ENST00000489130 RRP7BPQ9NSQ0 103 aa19.51■□□□□ 0.71
SRRM1-216ENST00000489130 PRDM15P57071 1507 aaPredicted RBP19.51■□□□□ 0.71
SRRM1-216ENST00000489130 PKD2Q13563 968 aa19.5■□□□□ 0.71
SRRM1-216ENST00000489130 NCKAP5LQ9HCH0 1330 aa19.5■□□□□ 0.71
SRRM1-216ENST00000489130 NLRP1Q9C000 1473 aa19.49■□□□□ 0.71
SRRM1-216ENST00000489130 ANKRD30AQ9BXX3 1397 aa19.49■□□□□ 0.71
SRRM1-216ENST00000489130 SPATA31D1Q6ZQQ2 1576 aa19.48■□□□□ 0.71
SRRM1-216ENST00000489130 ADGRL2O95490 1459 aa19.48■□□□□ 0.71
SRRM1-216ENST00000489130 DEPDC5O75140 1603 aa19.47■□□□□ 0.71
SRRM1-216ENST00000489130 LTBP4Q8N2S1 1624 aa19.47■□□□□ 0.71
SRRM1-216ENST00000489130 ERVK-7P63135 1459 aa19.46■□□□□ 0.71
SRRM1-216ENST00000489130 CEP152O94986 1710 aa19.45■□□□□ 0.7
SRRM1-216ENST00000489130 CHIC2Q9UKJ5 165 aa19.45■□□□□ 0.7
SRRM1-216ENST00000489130 FAM50AQ14320 339 aaKnown RBP19.44■□□□□ 0.7
SRRM1-216ENST00000489130 ARHGAP31Q2M1Z3 1444 aa19.43■□□□□ 0.7
SRRM1-216ENST00000489130 UGGT1Q9NYU2 1555 aa19.43■□□□□ 0.7
SRRM1-216ENST00000489130 NEURL4Q96JN8 1562 aa19.4■□□□□ 0.7
SRRM1-216ENST00000489130 THEMISQ8N1K5 641 aaPredicted RBP19.4■□□□□ 0.7
SRRM1-216ENST00000489130 VWDEQ8N2E2 1590 aa19.4■□□□□ 0.7
SRRM1-216ENST00000489130 POLR1AO95602 1720 aaPredicted RBP19.39■□□□□ 0.7
SRRM1-216ENST00000489130 KANK1Q14678 1352 aa19.39■□□□□ 0.69
SRRM1-216ENST00000489130 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.39■□□□□ 0.69
SRRM1-216ENST00000489130 IQSEC2Q5JU85 1478 aa19.39■□□□□ 0.69
SRRM1-216ENST00000489130 LMTK2Q8IWU2 1503 aa19.39■□□□□ 0.69
SRRM1-216ENST00000489130 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.38■□□□□ 0.692e-7■□□□□ 8
SRRM1-216ENST00000489130 ZNF335Q9H4Z2 1342 aaPredicted RBP19.37■□□□□ 0.69
SRRM1-216ENST00000489130 ANKRD50Q9ULJ7 1429 aa19.35■□□□□ 0.69
SRRM1-216ENST00000489130 ANKLE2Q86XL3 938 aa19.35■□□□□ 0.69
SRRM1-216ENST00000489130 MED14O60244 1454 aa19.35■□□□□ 0.69
SRRM1-216ENST00000489130 ROCK1Q13464 1354 aa19.32■□□□□ 0.68
SRRM1-216ENST00000489130 EFCAB6Q5THR3 1501 aa19.32■□□□□ 0.68
SRRM1-216ENST00000489130 UBR1Q8IWV7 1749 aa19.32■□□□□ 0.68
SRRM1-216ENST00000489130 NPHP4O75161 1426 aaPredicted RBP19.3■□□□□ 0.68
SRRM1-216ENST00000489130 CFAP65Q6ZU64 1925 aaKnown RBP19.29■□□□□ 0.68
SRRM1-216ENST00000489130 PPARGC1BQ86YN6 1023 aaKnown RBP19.28■□□□□ 0.68
SRRM1-216ENST00000489130 ARHGAP23Q9P227 1491 aa19.28■□□□□ 0.68
SRRM1-216ENST00000489130 IQGAP1P46940 1657 aa19.27■□□□□ 0.68
SRRM1-216ENST00000489130 NOS1P29475 1434 aa19.27■□□□□ 0.68
SRRM1-216ENST00000489130 SLIT1O75093 1534 aa19.27■□□□□ 0.68
SRRM1-216ENST00000489130 RPRD2Q5VT52 1461 aaKnown RBP19.27■□□□□ 0.67
SRRM1-216ENST00000489130 UNC13BO14795 1591 aa19.27■□□□□ 0.67
SRRM1-216ENST00000489130 CPS1P31327 1500 aa19.26■□□□□ 0.67
SRRM1-216ENST00000489130 PIK3C2BO00750 1634 aa19.26■□□□□ 0.67
SRRM1-216ENST00000489130 SYNMO15061 1565 aa19.26■□□□□ 0.67
SRRM1-216ENST00000489130 KDM5AP29375 1690 aaKnown RBP19.25■□□□□ 0.67
SRRM1-216ENST00000489130 SCAF11Q99590 1463 aaKnown RBP19.25■□□□□ 0.67
SRRM1-216ENST00000489130 TET3O43151 1660 aa19.24■□□□□ 0.67
SRRM1-216ENST00000489130 IDI1Q13907 227 aa19.22■□□□□ 0.67
SRRM1-216ENST00000489130 RRBP1Q9P2E9 1410 aaKnown RBP19.22■□□□□ 0.67
SRRM1-216ENST00000489130 TMEM2Q9UHN6 1383 aa19.21■□□□□ 0.67
SRRM1-216ENST00000489130 LTKP29376 864 aa19.21■□□□□ 0.67
SRRM1-216ENST00000489130 ITGAEP38570 1179 aa19.2■□□□□ 0.66
SRRM1-216ENST00000489130 SLC52A1Q9NWF4 448 aa19.2■□□□□ 0.66
SRRM1-216ENST00000489130 GCC2Q8IWJ2 1684 aa19.2■□□□□ 0.66
SRRM1-216ENST00000489130 TXNDC2Q86VQ3 553 aa19.19■□□□□ 0.66
SRRM1-216ENST00000489130 ADGRB3O60242 1522 aa19.19■□□□□ 0.66
SRRM1-216ENST00000489130 IQGAP3Q86VI3 1631 aa19.18■□□□□ 0.66
SRRM1-216ENST00000489130 STAG3Q9UJ98 1225 aa19.18■□□□□ 0.66
SRRM1-216ENST00000489130 EID1Q9Y6B2 187 aa19.18■□□□□ 0.66
SRRM1-216ENST00000489130 UBAP1LF5GYI3 381 aa19.17■□□□□ 0.66
SRRM1-216ENST00000489130 E9PCH4 1651 aa19.14■□□□□ 0.65
SRRM1-216ENST00000489130 STRCP1A6NGW2 1772 aa19.14■□□□□ 0.65
SRRM1-216ENST00000489130 NUP155O75694 1391 aa19.13■□□□□ 0.65
SRRM1-216ENST00000489130 LRRC7Q96NW7 1537 aa19.11■□□□□ 0.65
SRRM1-216ENST00000489130 TMEM131LA2VDJ0 1609 aa19.09■□□□□ 0.65
SRRM1-216ENST00000489130 ZFYVE9O95405 1425 aa19.08■□□□□ 0.65
SRRM1-216ENST00000489130 TOM1O60784 492 aa19.08■□□□□ 0.64
SRRM1-216ENST00000489130 NAIPQ13075 1403 aa19.08■□□□□ 0.64
SRRM1-216ENST00000489130 ALKQ9UM73 1620 aa19.06■□□□□ 0.64
SRRM1-216ENST00000489130 RIMS2Q9UQ26 1411 aa19.04■□□□□ 0.64
SRRM1-216ENST00000489130 MYO5BQ9ULV0 1848 aa19.04■□□□□ 0.64
SRRM1-216ENST00000489130 HFM1A2PYH4 1435 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms