RNA–Protein interactions for RNA: ENST00000489071.5

ERGIC3-218, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-218ENST00000489071 DHX29Q7Z478 1369 aaKnown RBP13.31□□□□□ -0.28
ERGIC3-218ENST00000489071 CCDC141Q6ZP82 1450 aa13.29□□□□□ -0.28
ERGIC3-218ENST00000489071 CAMSAP1Q5T5Y3 1602 aa13.29□□□□□ -0.28
ERGIC3-218ENST00000489071 PTPRKQ15262 1439 aa13.29□□□□□ -0.28
ERGIC3-218ENST00000489071 CAMSAP2Q08AD1 1489 aa13.29□□□□□ -0.28
ERGIC3-218ENST00000489071 MAP3K1Q13233 1512 aa13.29□□□□□ -0.28
ERGIC3-218ENST00000489071 ZNF142P52746 1687 aaPredicted RBP13.28□□□□□ -0.28
ERGIC3-218ENST00000489071 KIF3BO15066 747 aa13.27□□□□□ -0.29
ERGIC3-218ENST00000489071 TSPY4P0CV99 314 aa13.27□□□□□ -0.29
ERGIC3-218ENST00000489071 TSPY10P0CW01 314 aa13.27□□□□□ -0.29
ERGIC3-218ENST00000489071 PKD2Q13563 968 aa13.27□□□□□ -0.29
ERGIC3-218ENST00000489071 MYO3AQ8NEV4 1616 aa13.27□□□□□ -0.29
ERGIC3-218ENST00000489071 PLA2R1Q13018 1463 aa13.26□□□□□ -0.29
ERGIC3-218ENST00000489071 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
ERGIC3-218ENST00000489071 ARHGEF5Q12774 1597 aa13.25□□□□□ -0.29
ERGIC3-218ENST00000489071 CEP170BQ9Y4F5 1589 aaPredicted RBP13.25□□□□□ -0.29
ERGIC3-218ENST00000489071 FAM135AQ9P2D6 1515 aa13.25□□□□□ -0.29
ERGIC3-218ENST00000489071 LTBP4Q8N2S1 1624 aa13.24□□□□□ -0.29
ERGIC3-218ENST00000489071 IQSEC2Q5JU85 1478 aa13.24□□□□□ -0.29
ERGIC3-218ENST00000489071 LRRC9Q6ZRR7 1453 aa13.24□□□□□ -0.29
ERGIC3-218ENST00000489071 NCKAP5LQ9HCH0 1330 aa13.24□□□□□ -0.29
ERGIC3-218ENST00000489071 APLP2Q06481 763 aa13.24□□□□□ -0.29
ERGIC3-218ENST00000489071 WASHC2CQ9Y4E1 1318 aa13.22□□□□□ -0.29
ERGIC3-218ENST00000489071 KDM5DQ9BY66 1539 aa13.22□□□□□ -0.29
ERGIC3-218ENST00000489071 A2ML1A8K2U0 1454 aa13.22□□□□□ -0.29
ERGIC3-218ENST00000489071 TCOF1Q13428 1488 aaKnown RBP13.21□□□□□ -0.3
ERGIC3-218ENST00000489071 TNRQ92752 1358 aa13.2□□□□□ -0.3
ERGIC3-218ENST00000489071 PZPP20742 1482 aa13.2□□□□□ -0.3
ERGIC3-218ENST00000489071 DNMT1P26358 1616 aaKnown RBP13.2□□□□□ -0.3
ERGIC3-218ENST00000489071 FBXO31Q5XUX0 539 aaPredicted RBP13.19□□□□□ -0.3
ERGIC3-218ENST00000489071 MIA2Q96PC5 1412 aa13.19□□□□□ -0.3
ERGIC3-218ENST00000489071 MAST1Q9Y2H9 1570 aa13.19□□□□□ -0.3
ERGIC3-218ENST00000489071 KANK4Q5T7N3 995 aaPredicted RBP13.18□□□□□ -0.3
ERGIC3-218ENST00000489071 ZNF335Q9H4Z2 1342 aaPredicted RBP13.17□□□□□ -0.3
ERGIC3-218ENST00000489071 MYOM3Q5VTT5 1437 aa13.17□□□□□ -0.3
ERGIC3-218ENST00000489071 THEMISQ8N1K5 641 aaPredicted RBP13.16□□□□□ -0.3
ERGIC3-218ENST00000489071 POLR1AO95602 1720 aaPredicted RBP13.16□□□□□ -0.3
ERGIC3-218ENST00000489071 RNF17Q9BXT8 1623 aaKnown RBP13.15□□□□□ -0.3
ERGIC3-218ENST00000489071 EIF2AK4Q9P2K8 1649 aaKnown RBP13.15□□□□□ -0.3
ERGIC3-218ENST00000489071 NLRP1Q9C000 1473 aa13.15□□□□□ -0.3
ERGIC3-218ENST00000489071 ZC3H13Q5T200 1668 aaKnown RBP13.15□□□□□ -0.31
ERGIC3-218ENST00000489071 CFAP65Q6ZU64 1925 aaKnown RBP13.14□□□□□ -0.31
ERGIC3-218ENST00000489071 ANKLE2Q86XL3 938 aa13.14□□□□□ -0.31
ERGIC3-218ENST00000489071 UGGT1Q9NYU2 1555 aa13.12□□□□□ -0.31
ERGIC3-218ENST00000489071 DISP3Q9P2K9 1392 aa13.12□□□□□ -0.31
ERGIC3-218ENST00000489071 UBAP1LF5GYI3 381 aa13.12□□□□□ -0.31
ERGIC3-218ENST00000489071 ABCC3O15438 1527 aa13.12□□□□□ -0.31
ERGIC3-218ENST00000489071 DUOX2Q9NRD8 1548 aa13.12□□□□□ -0.31
ERGIC3-218ENST00000489071 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.11□□□□□ -0.31
ERGIC3-218ENST00000489071 TRIM26Q12899 539 aaPredicted RBP13.1□□□□□ -0.31
ERGIC3-218ENST00000489071 NEURL4Q96JN8 1562 aa13.1□□□□□ -0.31
ERGIC3-218ENST00000489071 CPS1P31327 1500 aa13.09□□□□□ -0.31
ERGIC3-218ENST00000489071 SPATA31D1Q6ZQQ2 1576 aa13.09□□□□□ -0.31
ERGIC3-218ENST00000489071 DEPDC5O75140 1603 aa13.09□□□□□ -0.31
ERGIC3-218ENST00000489071 PTPN23Q9H3S7 1636 aa13.09□□□□□ -0.31
ERGIC3-218ENST00000489071 SHANK2Q9UPX8 1470 aa13.09□□□□□ -0.31
ERGIC3-218ENST00000489071 CEP152O94986 1710 aa13.08□□□□□ -0.32
ERGIC3-218ENST00000489071 MED14O60244 1454 aa13.08□□□□□ -0.32
ERGIC3-218ENST00000489071 CROCC2H7BZ55 1655 aa13.08□□□□□ -0.32
ERGIC3-218ENST00000489071 KIF15Q9NS87 1388 aa13.07□□□□□ -0.32
ERGIC3-218ENST00000489071 ABCC5O15440 1437 aa13.07□□□□□ -0.32
ERGIC3-218ENST00000489071 NPHP4O75161 1426 aaPredicted RBP13.07□□□□□ -0.32
ERGIC3-218ENST00000489071 MROH1Q8NDA8 1641 aa13.07□□□□□ -0.32
ERGIC3-218ENST00000489071 ERVK-7P63135 1459 aa13.07□□□□□ -0.32
ERGIC3-218ENST00000489071 ERBINQ96RT1 1412 aa13.06□□□□□ -0.32
ERGIC3-218ENST00000489071 TOM1O60784 492 aa13.06□□□□□ -0.32
ERGIC3-218ENST00000489071 RRP7BPQ9NSQ0 103 aa13.06□□□□□ -0.32
ERGIC3-218ENST00000489071 IQGAP1P46940 1657 aa13.05□□□□□ -0.32
ERGIC3-218ENST00000489071 DAPK1P53355 1430 aa13.05□□□□□ -0.32
ERGIC3-218ENST00000489071 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
ERGIC3-218ENST00000489071 FGD6Q6ZV73 1430 aa13.05□□□□□ -0.32
ERGIC3-218ENST00000489071 PRDM15P57071 1507 aaPredicted RBP13.04□□□□□ -0.32
ERGIC3-218ENST00000489071 KANK1Q14678 1352 aa13.04□□□□□ -0.32
ERGIC3-218ENST00000489071 VWDEQ8N2E2 1590 aa13.03□□□□□ -0.32
ERGIC3-218ENST00000489071 ANKRD30AQ9BXX3 1397 aa13.03□□□□□ -0.32
ERGIC3-218ENST00000489071 UBR1Q8IWV7 1749 aa13.02□□□□□ -0.32
ERGIC3-218ENST00000489071 ILDR2Q71H61 639 aa13.02□□□□□ -0.33
ERGIC3-218ENST00000489071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.33
ERGIC3-218ENST00000489071 SLC4A2P04920 1241 aa13.01□□□□□ -0.33
ERGIC3-218ENST00000489071 PIP4K2BP78356 416 aa13□□□□□ -0.33
ERGIC3-218ENST00000489071 CHIC2Q9UKJ5 165 aa13□□□□□ -0.33
ERGIC3-218ENST00000489071 SCAF11Q99590 1463 aaKnown RBP12.99□□□□□ -0.33
ERGIC3-218ENST00000489071 SOCS7O14512 581 aa12.99□□□□□ -0.33
ERGIC3-218ENST00000489071 TXNDC2Q86VQ3 553 aa12.99□□□□□ -0.33
ERGIC3-218ENST00000489071 EID1Q9Y6B2 187 aa12.99□□□□□ -0.33
ERGIC3-218ENST00000489071 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
ERGIC3-218ENST00000489071 SLIT1O75093 1534 aa12.98□□□□□ -0.33
ERGIC3-218ENST00000489071 ARHGAP23Q9P227 1491 aa12.97□□□□□ -0.33
ERGIC3-218ENST00000489071 HSPA1LP34931 641 aa12.97□□□□□ -0.33
ERGIC3-218ENST00000489071 LMTK2Q8IWU2 1503 aa12.97□□□□□ -0.33
ERGIC3-218ENST00000489071 STRCP1A6NGW2 1772 aa12.97□□□□□ -0.33
ERGIC3-218ENST00000489071 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-218ENST00000489071 SYNMO15061 1565 aa12.96□□□□□ -0.33
ERGIC3-218ENST00000489071 LTKP29376 864 aa12.96□□□□□ -0.33
ERGIC3-218ENST00000489071 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-218ENST00000489071 PPARGC1BQ86YN6 1023 aaKnown RBP12.96□□□□□ -0.33
ERGIC3-218ENST00000489071 ADGRL2O95490 1459 aa12.96□□□□□ -0.34
ERGIC3-218ENST00000489071 KDM5AP29375 1690 aaKnown RBP12.96□□□□□ -0.34
ERGIC3-218ENST00000489071 PIK3C2BO00750 1634 aa12.95□□□□□ -0.34
ERGIC3-218ENST00000489071 LRRC7Q96NW7 1537 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms