RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 PREX1Q8TCU6 1659 aa23.06■■□□□ 1.28
CYTH3-209ENST00000488964 ZMYM3Q14202 1370 aa23.06■■□□□ 1.28
CYTH3-209ENST00000488964 KDM5DQ9BY66 1539 aa23.06■■□□□ 1.28
CYTH3-209ENST00000488964 RRP7BPQ9NSQ0 103 aa23.05■■□□□ 1.28
CYTH3-209ENST00000488964 UHRF1BP1Q6BDS2 1440 aa23.05■■□□□ 1.28
CYTH3-209ENST00000488964 WASHC2CQ9Y4E1 1318 aa23.05■■□□□ 1.28
CYTH3-209ENST00000488964 LMTK3Q96Q04 1460 aa23.05■■□□□ 1.28
CYTH3-209ENST00000488964 CHIC2Q9UKJ5 165 aa23.04■■□□□ 1.28
CYTH3-209ENST00000488964 NPATQ14207 1427 aa23.04■■□□□ 1.28
CYTH3-209ENST00000488964 RNF17Q9BXT8 1623 aaKnown RBP23.03■■□□□ 1.28
CYTH3-209ENST00000488964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.02■■□□□ 1.28
CYTH3-209ENST00000488964 ADGRL2O95490 1459 aa23.01■■□□□ 1.27
CYTH3-209ENST00000488964 ZC3H13Q5T200 1668 aaKnown RBP23■■□□□ 1.27
CYTH3-209ENST00000488964 NCOA1Q15788 1441 aa22.99■■□□□ 1.27
CYTH3-209ENST00000488964 KANK1Q14678 1352 aa22.98■■□□□ 1.27
CYTH3-209ENST00000488964 ROCK1Q13464 1354 aa22.94■■□□□ 1.26
CYTH3-209ENST00000488964 PZPP20742 1482 aa22.93■■□□□ 1.26
CYTH3-209ENST00000488964 PTPRKQ15262 1439 aa22.93■■□□□ 1.26
CYTH3-209ENST00000488964 RRBP1Q9P2E9 1410 aaKnown RBP22.93■■□□□ 1.26
CYTH3-209ENST00000488964 PRDM15P57071 1507 aaPredicted RBP22.92■■□□□ 1.26
CYTH3-209ENST00000488964 ITGAEP38570 1179 aa22.92■■□□□ 1.26
CYTH3-209ENST00000488964 ABCC3O15438 1527 aa22.92■■□□□ 1.26
CYTH3-209ENST00000488964 ANKRD50Q9ULJ7 1429 aa22.91■■□□□ 1.26
CYTH3-209ENST00000488964 HSPA2P54652 639 aa22.9■■□□□ 1.26
CYTH3-209ENST00000488964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.89■■□□□ 1.25
CYTH3-209ENST00000488964 DEPDC5O75140 1603 aa22.89■■□□□ 1.25
CYTH3-209ENST00000488964 MROH1Q8NDA8 1641 aa22.89■■□□□ 1.25
CYTH3-209ENST00000488964 TNRQ92752 1358 aa22.88■■□□□ 1.25
CYTH3-209ENST00000488964 MYO3AQ8NEV4 1616 aa22.87■■□□□ 1.25
CYTH3-209ENST00000488964 CEP152O94986 1710 aa22.86■■□□□ 1.25
CYTH3-209ENST00000488964 CAMSAP1Q5T5Y3 1602 aa22.85■■□□□ 1.25
CYTH3-209ENST00000488964 ZNF142P52746 1687 aaPredicted RBP22.84■■□□□ 1.25
CYTH3-209ENST00000488964 DMRT2Q9Y5R5 561 aa22.83■■□□□ 1.25
CYTH3-209ENST00000488964 CEP170BQ9Y4F5 1589 aaPredicted RBP22.83■■□□□ 1.25
CYTH3-209ENST00000488964 NLRP1Q9C000 1473 aa22.81■■□□□ 1.24
CYTH3-209ENST00000488964 ARHGAP31Q2M1Z3 1444 aa22.81■■□□□ 1.24
CYTH3-209ENST00000488964 A2ML1A8K2U0 1454 aa22.8■■□□□ 1.24
CYTH3-209ENST00000488964 FBXO31Q5XUX0 539 aaPredicted RBP22.8■■□□□ 1.24
CYTH3-209ENST00000488964 LMTK2Q8IWU2 1503 aa22.79■■□□□ 1.24
CYTH3-209ENST00000488964 ERVK-7P63135 1459 aa22.78■■□□□ 1.24
CYTH3-209ENST00000488964 SPATA31D1Q6ZQQ2 1576 aa22.77■■□□□ 1.24
CYTH3-209ENST00000488964 VWDEQ8N2E2 1590 aa22.76■■□□□ 1.23
CYTH3-209ENST00000488964 CFAP65Q6ZU64 1925 aaKnown RBP22.76■■□□□ 1.23
CYTH3-209ENST00000488964 PLA2R1Q13018 1463 aa22.74■■□□□ 1.23
CYTH3-209ENST00000488964 UNC13BO14795 1591 aa22.74■■□□□ 1.23
CYTH3-209ENST00000488964 EFCAB6Q5THR3 1501 aa22.72■■□□□ 1.23
CYTH3-209ENST00000488964 PKD2Q13563 968 aa22.72■■□□□ 1.23
CYTH3-209ENST00000488964 THEMISQ8N1K5 641 aaPredicted RBP22.72■■□□□ 1.23
CYTH3-209ENST00000488964 RPRD2Q5VT52 1461 aaKnown RBP22.7■■□□□ 1.22
CYTH3-209ENST00000488964 UGGT1Q9NYU2 1555 aa22.7■■□□□ 1.22
CYTH3-209ENST00000488964 TET3O43151 1660 aa22.7■■□□□ 1.22
CYTH3-209ENST00000488964 STRCQ7RTU9 1775 aa22.7■■□□□ 1.22
CYTH3-209ENST00000488964 PTPRTO14522 1441 aa22.69■■□□□ 1.22
CYTH3-209ENST00000488964 GCC2Q8IWJ2 1684 aa22.68■■□□□ 1.22
CYTH3-209ENST00000488964 NUP155O75694 1391 aa22.68■■□□□ 1.22
CYTH3-209ENST00000488964 STAG3Q9UJ98 1225 aa22.66■■□□□ 1.22
CYTH3-209ENST00000488964 IQGAP3Q86VI3 1631 aa22.66■■□□□ 1.22
CYTH3-209ENST00000488964 HFM1A2PYH4 1435 aa22.65■■□□□ 1.22
CYTH3-209ENST00000488964 NAIPQ13075 1403 aa22.65■■□□□ 1.22
CYTH3-209ENST00000488964 ANKLE2Q86XL3 938 aa22.63■■□□□ 1.21
CYTH3-209ENST00000488964 NCKAP5LQ9HCH0 1330 aa22.61■■□□□ 1.21
CYTH3-209ENST00000488964 POLR1AO95602 1720 aaPredicted RBP22.61■■□□□ 1.21
CYTH3-209ENST00000488964 SLC52A1Q9NWF4 448 aa22.61■■□□□ 1.21
CYTH3-209ENST00000488964 NOS1P29475 1434 aa22.6■■□□□ 1.21
CYTH3-209ENST00000488964 ACIN1Q9UKV3 1341 aaKnown RBP22.58■■□□□ 1.21
CYTH3-209ENST00000488964 UBR1Q8IWV7 1749 aa22.57■■□□□ 1.2
CYTH3-209ENST00000488964 TRIM52Q96A61 297 aa22.57■■□□□ 1.2
CYTH3-209ENST00000488964 KDM5AP29375 1690 aaKnown RBP22.56■■□□□ 1.2
CYTH3-209ENST00000488964 EID1Q9Y6B2 187 aa22.56■■□□□ 1.2
CYTH3-209ENST00000488964 SYNMO15061 1565 aa22.55■■□□□ 1.2
CYTH3-209ENST00000488964 PIK3C2BO00750 1634 aa22.55■■□□□ 1.2
CYTH3-209ENST00000488964 E9PCH4 1651 aa22.55■■□□□ 1.2
CYTH3-209ENST00000488964 IDI1Q13907 227 aa22.53■■□□□ 1.2
CYTH3-209ENST00000488964 ADGRB3O60242 1522 aa22.52■■□□□ 1.19
CYTH3-209ENST00000488964 NPHP4O75161 1426 aaPredicted RBP22.5■■□□□ 1.19
CYTH3-209ENST00000488964 SCAF11Q99590 1463 aaKnown RBP22.5■■□□□ 1.19
CYTH3-209ENST00000488964 SLIT1O75093 1534 aa22.5■■□□□ 1.19
CYTH3-209ENST00000488964 MED14O60244 1454 aa22.49■■□□□ 1.19
CYTH3-209ENST00000488964 HDGFP51858 240 aaKnown RBP22.49■■□□□ 1.19
CYTH3-209ENST00000488964 TMEM2Q9UHN6 1383 aa22.49■■□□□ 1.19
CYTH3-209ENST00000488964 NEURL4Q96JN8 1562 aa22.48■■□□□ 1.19
CYTH3-209ENST00000488964 CERKQ8TCT0 537 aa22.48■■□□□ 1.19
CYTH3-209ENST00000488964 ARHGAP23Q9P227 1491 aa22.47■■□□□ 1.19
CYTH3-209ENST00000488964 IQGAP1P46940 1657 aa22.47■■□□□ 1.19
CYTH3-209ENST00000488964 TXNDC2Q86VQ3 553 aa22.47■■□□□ 1.19
CYTH3-209ENST00000488964 CHGAP10645 457 aaKnown RBP22.46■■□□□ 1.19
CYTH3-209ENST00000488964 SLC4A1APQ9BWU0 796 aaKnown RBP22.46■■□□□ 1.19
CYTH3-209ENST00000488964 SPHKAPQ2M3C7 1700 aa22.45■■□□□ 1.19
CYTH3-209ENST00000488964 SETD5Q9C0A6 1442 aa22.44■■□□□ 1.18
CYTH3-209ENST00000488964 PPP1R15AO75807 674 aaPredicted RBP22.42■■□□□ 1.18
CYTH3-209ENST00000488964 ZNF335Q9H4Z2 1342 aaPredicted RBP22.41■■□□□ 1.18
CYTH3-209ENST00000488964 FBXO41Q8TF61 875 aa22.41■■□□□ 1.18
CYTH3-209ENST00000488964 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.4■■□□□ 1.18
CYTH3-209ENST00000488964 TMEM131LA2VDJ0 1609 aa22.39■■□□□ 1.18
CYTH3-209ENST00000488964 IQSEC2Q5JU85 1478 aa22.39■■□□□ 1.17
CYTH3-209ENST00000488964 TRPM2O94759 1503 aa22.38■■□□□ 1.17
CYTH3-209ENST00000488964 LTKP29376 864 aa22.38■■□□□ 1.17
CYTH3-209ENST00000488964 BCANQ96GW7 911 aa22.38■■□□□ 1.17
CYTH3-209ENST00000488964 LTBP4Q8N2S1 1624 aa22.38■■□□□ 1.17
CYTH3-209ENST00000488964 CPS1P31327 1500 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms