RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 A2MP01023 1474 aa15.91■□□□□ 0.14
USP11-209ENST00000488848 IQGAP3Q86VI3 1631 aa15.91■□□□□ 0.14
USP11-209ENST00000488848 AGLP35573 1532 aa15.91■□□□□ 0.14
USP11-209ENST00000488848 FAM135AQ9P2D6 1515 aa15.9■□□□□ 0.14
USP11-209ENST00000488848 PZPP20742 1482 aa15.9■□□□□ 0.14
USP11-209ENST00000488848 MROH1Q8NDA8 1641 aa15.9■□□□□ 0.14
USP11-209ENST00000488848 RAPGEF3O95398 923 aa15.87■□□□□ 0.13
USP11-209ENST00000488848 LMTK2Q8IWU2 1503 aa15.87■□□□□ 0.13
USP11-209ENST00000488848 ATP10AO60312 1499 aa15.86■□□□□ 0.13
USP11-209ENST00000488848 YEATS2Q9ULM3 1422 aa15.85■□□□□ 0.13
USP11-209ENST00000488848 ZC3H13Q5T200 1668 aaKnown RBP15.82■□□□□ 0.12
USP11-209ENST00000488848 TET3O43151 1660 aa15.81■□□□□ 0.12
USP11-209ENST00000488848 NUP155O75694 1391 aa15.78■□□□□ 0.12
USP11-209ENST00000488848 CCER1Q8TC90 406 aaPredicted RBP15.78■□□□□ 0.12
USP11-209ENST00000488848 TRHP20396 242 aaPredicted RBP15.77■□□□□ 0.12
USP11-209ENST00000488848 ZEB1P37275 1124 aaPredicted RBP15.77■□□□□ 0.12
USP11-209ENST00000488848 MPHOSPH9Q99550 1183 aa15.77■□□□□ 0.12
USP11-209ENST00000488848 EFCAB6Q5THR3 1501 aa15.77■□□□□ 0.11
USP11-209ENST00000488848 SIGLEC1Q9BZZ2 1709 aa15.77■□□□□ 0.11
USP11-209ENST00000488848 RPRD2Q5VT52 1461 aaKnown RBP15.76■□□□□ 0.11
USP11-209ENST00000488848 ANKRD30BQ9BXX2 1392 aa15.75■□□□□ 0.11
USP11-209ENST00000488848 ABCC3O15438 1527 aa15.75■□□□□ 0.11
USP11-209ENST00000488848 PPP6R1Q9UPN7 881 aa15.75■□□□□ 0.11
USP11-209ENST00000488848 ARHGAP31Q2M1Z3 1444 aa15.74■□□□□ 0.11
USP11-209ENST00000488848 KANK1Q14678 1352 aa15.74■□□□□ 0.11
USP11-209ENST00000488848 E9PCH4 1651 aa15.73■□□□□ 0.11
USP11-209ENST00000488848 PTPRTO14522 1441 aa15.72■□□□□ 0.11
USP11-209ENST00000488848 TIMELESSQ9UNS1 1208 aa15.72■□□□□ 0.11
USP11-209ENST00000488848 NEURL4Q96JN8 1562 aa15.71■□□□□ 0.11
USP11-209ENST00000488848 KIF3BO15066 747 aa15.71■□□□□ 0.11
USP11-209ENST00000488848 SLC4A1APQ9BWU0 796 aaKnown RBP15.71■□□□□ 0.11
USP11-209ENST00000488848 TRPM2O94759 1503 aa15.7■□□□□ 0.1
USP11-209ENST00000488848 TRIM52Q96A61 297 aa15.7■□□□□ 0.1
USP11-209ENST00000488848 CAMSAP1Q5T5Y3 1602 aa15.69■□□□□ 0.1
USP11-209ENST00000488848 CEP152O94986 1710 aa15.69■□□□□ 0.1
USP11-209ENST00000488848 PLA2R1Q13018 1463 aa15.69■□□□□ 0.1
USP11-209ENST00000488848 SPHKAPQ2M3C7 1700 aa15.68■□□□□ 0.1
USP11-209ENST00000488848 MYT1LQ9UL68 1186 aa15.67■□□□□ 0.1
USP11-209ENST00000488848 MROH2AA6NES4 1674 aa15.67■□□□□ 0.1
USP11-209ENST00000488848 PKD2Q13563 968 aa15.66■□□□□ 0.1
USP11-209ENST00000488848 NPATQ14207 1427 aa15.65■□□□□ 0.1
USP11-209ENST00000488848 NOS1P29475 1434 aa15.64■□□□□ 0.09
USP11-209ENST00000488848 CNTLNQ9NXG0 1405 aa15.63■□□□□ 0.09
USP11-209ENST00000488848 PIK3C2BO00750 1634 aa15.61■□□□□ 0.09
USP11-209ENST00000488848 SPATA31D1Q6ZQQ2 1576 aa15.59■□□□□ 0.09
USP11-209ENST00000488848 CLTCQ00610 1675 aaKnown RBP15.58■□□□□ 0.08
USP11-209ENST00000488848 PREX1Q8TCU6 1659 aa15.58■□□□□ 0.08
USP11-209ENST00000488848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.08
USP11-209ENST00000488848 WASHC2CQ9Y4E1 1318 aa15.58■□□□□ 0.08
USP11-209ENST00000488848 CCDC144AA2RUR9 1427 aa15.58■□□□□ 0.08
USP11-209ENST00000488848 SPATA31E1Q6ZUB1 1445 aa15.57■□□□□ 0.08
USP11-209ENST00000488848 SYNMO15061 1565 aa15.57■□□□□ 0.08
USP11-209ENST00000488848 CLTCL1P53675 1640 aa15.57■□□□□ 0.08
USP11-209ENST00000488848 GGT6Q6P531 493 aa15.56■□□□□ 0.08
USP11-209ENST00000488848 ADAMTSL3P82987 1691 aa15.56■□□□□ 0.08
USP11-209ENST00000488848 ERVK-7P63135 1459 aa15.55■□□□□ 0.08
USP11-209ENST00000488848 FOXD1Q16676 465 aa15.55■□□□□ 0.08
USP11-209ENST00000488848 ADGRB3O60242 1522 aa15.54■□□□□ 0.08
USP11-209ENST00000488848 SIN3AQ96ST3 1273 aa15.54■□□□□ 0.08
USP11-209ENST00000488848 FER1L4A9Z1Z3 1794 aa15.54■□□□□ 0.08
USP11-209ENST00000488848 KDM5AP29375 1690 aaKnown RBP15.54■□□□□ 0.08
USP11-209ENST00000488848 UHRF1BP1Q6BDS2 1440 aa15.51■□□□□ 0.07
USP11-209ENST00000488848 TONSLQ96HA7 1378 aa15.51■□□□□ 0.07
USP11-209ENST00000488848 KIF1BO60333 1816 aa15.5■□□□□ 0.07
USP11-209ENST00000488848 STAC3Q96MF2 364 aa15.5■□□□□ 0.07
USP11-209ENST00000488848 IFT172Q9UG01 1749 aa15.49■□□□□ 0.07
USP11-209ENST00000488848 ZMYM3Q14202 1370 aa15.49■□□□□ 0.07
USP11-209ENST00000488848 SLC52A1Q9NWF4 448 aa15.48■□□□□ 0.07
USP11-209ENST00000488848 C3P01024 1663 aa15.48■□□□□ 0.07
USP11-209ENST00000488848 MADDQ8WXG6 1647 aa15.47■□□□□ 0.07
USP11-209ENST00000488848 PPP1R15AO75807 674 aaPredicted RBP15.47■□□□□ 0.07
USP11-209ENST00000488848 UGGT1Q9NYU2 1555 aa15.47■□□□□ 0.07
USP11-209ENST00000488848 MYOM2P54296 1465 aa15.46■□□□□ 0.07
USP11-209ENST00000488848 TMEM131LA2VDJ0 1609 aa15.45■□□□□ 0.06
USP11-209ENST00000488848 NRXN1Q9ULB1 1477 aa15.45■□□□□ 0.06
USP11-209ENST00000488848 L3MBTL2Q969R5 705 aa15.44■□□□□ 0.06
USP11-209ENST00000488848 NLRP1Q9C000 1473 aa15.44■□□□□ 0.06
USP11-209ENST00000488848 ARID4BQ4LE39 1312 aaPredicted RBP15.43■□□□□ 0.06
USP11-209ENST00000488848 NEUROD1Q13562 356 aa15.43■□□□□ 0.06
USP11-209ENST00000488848 CFAP65Q6ZU64 1925 aaKnown RBP15.42■□□□□ 0.06
USP11-209ENST00000488848 ZFYVE9O95405 1425 aa15.42■□□□□ 0.06
USP11-209ENST00000488848 PPLO60437 1756 aa15.41■□□□□ 0.06
USP11-209ENST00000488848 KIAA1210Q9ULL0 1709 aa15.41■□□□□ 0.06
USP11-209ENST00000488848 PRAG1Q86YV5 1406 aa15.41■□□□□ 0.06
USP11-209ENST00000488848 RPGRIP1LQ68CZ1 1315 aa15.41■□□□□ 0.06
USP11-209ENST00000488848 RALGAPBQ86X10 1494 aa15.4■□□□□ 0.06
USP11-209ENST00000488848 LAMC1P11047 1609 aa15.4■□□□□ 0.06
USP11-209ENST00000488848 NEXMIFQ5QGS0 1516 aa15.4■□□□□ 0.06
USP11-209ENST00000488848 ESF1Q9H501 851 aaKnown RBP15.4■□□□□ 0.06
USP11-209ENST00000488848 RIMS1Q86UR5 1692 aaKnown RBP15.4■□□□□ 0.06
USP11-209ENST00000488848 TNRQ92752 1358 aa15.39■□□□□ 0.05
USP11-209ENST00000488848 ZNF142P52746 1687 aaPredicted RBP15.38■□□□□ 0.05
USP11-209ENST00000488848 MLECQ14165 292 aa15.38■□□□□ 0.05
USP11-209ENST00000488848 TRPM1Q7Z4N2 1603 aa15.38■□□□□ 0.05
USP11-209ENST00000488848 SETD1BQ9UPS6 1966 aaKnown RBP15.38■□□□□ 0.05
USP11-209ENST00000488848 GPRASP1Q5JY77 1395 aa15.37■□□□□ 0.05
USP11-209ENST00000488848 A2ML1A8K2U0 1454 aa15.37■□□□□ 0.05
USP11-209ENST00000488848 UBR1Q8IWV7 1749 aa15.37■□□□□ 0.05
USP11-209ENST00000488848 MYO3AQ8NEV4 1616 aa15.36■□□□□ 0.05
USP11-209ENST00000488848 IDI1Q13907 227 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms