RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 PLXNC1O60486 1568 aa19.36■□□□□ 0.69
SFXN5-219ENST00000488839 MYOM3Q5VTT5 1437 aa19.35■□□□□ 0.69
SFXN5-219ENST00000488839 ZNF219Q9P2Y4 722 aaPredicted RBP19.35■□□□□ 0.69
SFXN5-219ENST00000488839 ADGBQ8N7X0 1667 aa19.35■□□□□ 0.69
SFXN5-219ENST00000488839 LMTK3Q96Q04 1460 aa19.35■□□□□ 0.69
SFXN5-219ENST00000488839 DHX29Q7Z478 1369 aaKnown RBP19.33■□□□□ 0.69
SFXN5-219ENST00000488839 SETD1BQ9UPS6 1966 aaKnown RBP19.31■□□□□ 0.68
SFXN5-219ENST00000488839 CEBPAP49715 358 aaPredicted RBP19.29■□□□□ 0.68
SFXN5-219ENST00000488839 MROH2AA6NES4 1674 aa19.27■□□□□ 0.68
SFXN5-219ENST00000488839 ABCB7O75027 752 aa19.26■□□□□ 0.67
SFXN5-219ENST00000488839 MAST1Q9Y2H9 1570 aa19.26■□□□□ 0.67
SFXN5-219ENST00000488839 PREX1Q8TCU6 1659 aa19.26■□□□□ 0.67
SFXN5-219ENST00000488839 C3P01024 1663 aa19.25■□□□□ 0.67
SFXN5-219ENST00000488839 ZMYM3Q14202 1370 aa19.25■□□□□ 0.67
SFXN5-219ENST00000488839 GGT6Q6P531 493 aa19.25■□□□□ 0.67
SFXN5-219ENST00000488839 NPATQ14207 1427 aa19.25■□□□□ 0.67
SFXN5-219ENST00000488839 FAM135AQ9P2D6 1515 aa19.24■□□□□ 0.67
SFXN5-219ENST00000488839 UHRF1BP1Q6BDS2 1440 aa19.24■□□□□ 0.67
SFXN5-219ENST00000488839 KIF3BO15066 747 aa19.21■□□□□ 0.67
SFXN5-219ENST00000488839 FGD6Q6ZV73 1430 aa19.19■□□□□ 0.66
SFXN5-219ENST00000488839 HSPA2P54652 639 aa19.19■□□□□ 0.66
SFXN5-219ENST00000488839 TCOF1Q13428 1488 aaKnown RBP19.19■□□□□ 0.66
SFXN5-219ENST00000488839 PTPN23Q9H3S7 1636 aa19.18■□□□□ 0.66
SFXN5-219ENST00000488839 SHANK2Q9UPX8 1470 aa19.18■□□□□ 0.66
SFXN5-219ENST00000488839 CLTCQ00610 1675 aaKnown RBP19.17■□□□□ 0.66
SFXN5-219ENST00000488839 ABCC5O15440 1437 aa19.16■□□□□ 0.66
SFXN5-219ENST00000488839 WASHC2CQ9Y4E1 1318 aa19.14■□□□□ 0.65
SFXN5-219ENST00000488839 PTPRKQ15262 1439 aa19.14■□□□□ 0.65
SFXN5-219ENST00000488839 EIF2AK4Q9P2K8 1649 aaKnown RBP19.14■□□□□ 0.65
SFXN5-219ENST00000488839 DAPK1P53355 1430 aa19.13■□□□□ 0.65
SFXN5-219ENST00000488839 KDM5DQ9BY66 1539 aa19.13■□□□□ 0.65
SFXN5-219ENST00000488839 DUOX2Q9NRD8 1548 aa19.13■□□□□ 0.65
SFXN5-219ENST00000488839 SAMD1Q6SPF0 538 aaPredicted RBP19.12■□□□□ 0.65
SFXN5-219ENST00000488839 DNMT1P26358 1616 aaKnown RBP19.11■□□□□ 0.65
SFXN5-219ENST00000488839 CROCC2H7BZ55 1655 aa19.1■□□□□ 0.65
SFXN5-219ENST00000488839 RNF17Q9BXT8 1623 aaKnown RBP19.1■□□□□ 0.65
SFXN5-219ENST00000488839 ERBINQ96RT1 1412 aa19.09■□□□□ 0.65
SFXN5-219ENST00000488839 PZPP20742 1482 aa19.09■□□□□ 0.65
SFXN5-219ENST00000488839 ANKRD30AQ9BXX3 1397 aa19.08■□□□□ 0.65
SFXN5-219ENST00000488839 KIF15Q9NS87 1388 aa19.08■□□□□ 0.65
SFXN5-219ENST00000488839 ZC3H13Q5T200 1668 aaKnown RBP19.06■□□□□ 0.64
SFXN5-219ENST00000488839 PTPRTO14522 1441 aa19.06■□□□□ 0.64
SFXN5-219ENST00000488839 RRP7BPQ9NSQ0 103 aa19.05■□□□□ 0.64
SFXN5-219ENST00000488839 STRCQ7RTU9 1775 aa19.04■□□□□ 0.64
SFXN5-219ENST00000488839 NCOA1Q15788 1441 aa19.04■□□□□ 0.64
SFXN5-219ENST00000488839 ZNF142P52746 1687 aaPredicted RBP19.03■□□□□ 0.64
SFXN5-219ENST00000488839 MYO3AQ8NEV4 1616 aa19.03■□□□□ 0.64
SFXN5-219ENST00000488839 ADGRL2O95490 1459 aa19.03■□□□□ 0.64
SFXN5-219ENST00000488839 PLA2R1Q13018 1463 aa19.03■□□□□ 0.64
SFXN5-219ENST00000488839 ABCC3O15438 1527 aa19.02■□□□□ 0.64
SFXN5-219ENST00000488839 PKD2Q13563 968 aa19.02■□□□□ 0.64
SFXN5-219ENST00000488839 FAM50AQ14320 339 aaKnown RBP19.02■□□□□ 0.64
SFXN5-219ENST00000488839 TNRQ92752 1358 aa19.02■□□□□ 0.64
SFXN5-219ENST00000488839 A2ML1A8K2U0 1454 aa19.02■□□□□ 0.63
SFXN5-219ENST00000488839 CEP170BQ9Y4F5 1589 aaPredicted RBP19.02■□□□□ 0.63
SFXN5-219ENST00000488839 ILDR1Q86SU0 546 aaPredicted RBP19.01■□□□□ 0.63
SFXN5-219ENST00000488839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.01■□□□□ 0.63
SFXN5-219ENST00000488839 FBXO31Q5XUX0 539 aaPredicted RBP19■□□□□ 0.63
SFXN5-219ENST00000488839 CAMSAP1Q5T5Y3 1602 aa19■□□□□ 0.63
SFXN5-219ENST00000488839 MROH1Q8NDA8 1641 aa19■□□□□ 0.63
SFXN5-219ENST00000488839 NLRP1Q9C000 1473 aa18.99■□□□□ 0.63
SFXN5-219ENST00000488839 CHIC2Q9UKJ5 165 aa18.99■□□□□ 0.63
SFXN5-219ENST00000488839 PRDM15P57071 1507 aaPredicted RBP18.99■□□□□ 0.63
SFXN5-219ENST00000488839 ARHGAP31Q2M1Z3 1444 aa18.99■□□□□ 0.63
SFXN5-219ENST00000488839 KANK1Q14678 1352 aa18.98■□□□□ 0.63
SFXN5-219ENST00000488839 FBXO41Q8TF61 875 aa18.98■□□□□ 0.63
SFXN5-219ENST00000488839 DEPDC5O75140 1603 aa18.96■□□□□ 0.63
SFXN5-219ENST00000488839 THEMISQ8N1K5 641 aaPredicted RBP18.96■□□□□ 0.63
SFXN5-219ENST00000488839 RBM42Q9BTD8 480 aaKnown RBP18.96■□□□□ 0.63
SFXN5-219ENST00000488839 SPATA31D1Q6ZQQ2 1576 aa18.95■□□□□ 0.62
SFXN5-219ENST00000488839 ROCK1Q13464 1354 aa18.94■□□□□ 0.62
SFXN5-219ENST00000488839 CERKQ8TCT0 537 aa18.94■□□□□ 0.62
SFXN5-219ENST00000488839 ANKRD50Q9ULJ7 1429 aa18.92■□□□□ 0.62
SFXN5-219ENST00000488839 LMTK2Q8IWU2 1503 aa18.92■□□□□ 0.62
SFXN5-219ENST00000488839 ERVK-7P63135 1459 aa18.91■□□□□ 0.62
SFXN5-219ENST00000488839 VWDEQ8N2E2 1590 aa18.9■□□□□ 0.62
SFXN5-219ENST00000488839 NCKAP5LQ9HCH0 1330 aa18.9■□□□□ 0.62
SFXN5-219ENST00000488839 UGGT1Q9NYU2 1555 aa18.89■□□□□ 0.62
SFXN5-219ENST00000488839 CEP152O94986 1710 aa18.89■□□□□ 0.61
SFXN5-219ENST00000488839 ANKLE2Q86XL3 938 aa18.88■□□□□ 0.61
SFXN5-219ENST00000488839 RRBP1Q9P2E9 1410 aaKnown RBP18.85■□□□□ 0.61
SFXN5-219ENST00000488839 IQSEC2Q5JU85 1478 aa18.84■□□□□ 0.61
SFXN5-219ENST00000488839 PPARGC1BQ86YN6 1023 aaKnown RBP18.83■□□□□ 0.6
SFXN5-219ENST00000488839 MED14O60244 1454 aa18.83■□□□□ 0.6
SFXN5-219ENST00000488839 RPRD2Q5VT52 1461 aaKnown RBP18.83■□□□□ 0.6
SFXN5-219ENST00000488839 LTBP4Q8N2S1 1624 aa18.82■□□□□ 0.6
SFXN5-219ENST00000488839 POLR1AO95602 1720 aaPredicted RBP18.81■□□□□ 0.6
SFXN5-219ENST00000488839 EFCAB6Q5THR3 1501 aa18.8■□□□□ 0.6
SFXN5-219ENST00000488839 SLC52A1Q9NWF4 448 aa18.8■□□□□ 0.6
SFXN5-219ENST00000488839 NOS1P29475 1434 aa18.8■□□□□ 0.6
SFXN5-219ENST00000488839 UNC13BO14795 1591 aa18.79■□□□□ 0.6
SFXN5-219ENST00000488839 KDM5AP29375 1690 aaKnown RBP18.78■□□□□ 0.6
SFXN5-219ENST00000488839 CFAP65Q6ZU64 1925 aaKnown RBP18.78■□□□□ 0.6
SFXN5-219ENST00000488839 UBR1Q8IWV7 1749 aa18.77■□□□□ 0.6
SFXN5-219ENST00000488839 NEURL4Q96JN8 1562 aa18.77■□□□□ 0.6
SFXN5-219ENST00000488839 ITGAEP38570 1179 aa18.77■□□□□ 0.6
SFXN5-219ENST00000488839 NPHP4O75161 1426 aaPredicted RBP18.76■□□□□ 0.59
SFXN5-219ENST00000488839 SLIT1O75093 1534 aa18.76■□□□□ 0.59
SFXN5-219ENST00000488839 ARHGAP23Q9P227 1491 aa18.76■□□□□ 0.59
SFXN5-219ENST00000488839 TET3O43151 1660 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms