RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 ADAMTSL3P82987 1691 aa14.96□□□□□ -0.01
PDPN-206ENST00000488631 RIMS1Q86UR5 1692 aaKnown RBP14.96□□□□□ -0.01
PDPN-206ENST00000488631 WASHC2CQ9Y4E1 1318 aa14.95□□□□□ -0.02
PDPN-206ENST00000488631 DAPK1P53355 1430 aa14.95□□□□□ -0.02
PDPN-206ENST00000488631 ANKRD30AQ9BXX3 1397 aa14.95□□□□□ -0.02
PDPN-206ENST00000488631 AGLP35573 1532 aa14.94□□□□□ -0.02
PDPN-206ENST00000488631 KIF15Q9NS87 1388 aa14.94□□□□□ -0.02
PDPN-206ENST00000488631 REREQ9P2R6 1566 aa14.94□□□□□ -0.02
PDPN-206ENST00000488631 TCOF1Q13428 1488 aaKnown RBP14.93□□□□□ -0.02
PDPN-206ENST00000488631 SIGLEC1Q9BZZ2 1709 aa14.92□□□□□ -0.02
PDPN-206ENST00000488631 CNTLNQ9NXG0 1405 aa14.92□□□□□ -0.02
PDPN-206ENST00000488631 ADGBQ8N7X0 1667 aa14.91□□□□□ -0.02
PDPN-206ENST00000488631 FER1L4A9Z1Z3 1794 aa14.9□□□□□ -0.02
PDPN-206ENST00000488631 SHANK2Q9UPX8 1470 aa14.89□□□□□ -0.03
PDPN-206ENST00000488631 ZMYM3Q14202 1370 aa14.88□□□□□ -0.03
PDPN-206ENST00000488631 HSPA2P54652 639 aa14.87□□□□□ -0.03
PDPN-206ENST00000488631 DNMT1P26358 1616 aaKnown RBP14.87□□□□□ -0.03
PDPN-206ENST00000488631 KANK1Q14678 1352 aa14.86□□□□□ -0.03
PDPN-206ENST00000488631 PLXNC1O60486 1568 aa14.86□□□□□ -0.03
PDPN-206ENST00000488631 MAST1Q9Y2H9 1570 aa14.86□□□□□ -0.03
PDPN-206ENST00000488631 DUOX2Q9NRD8 1548 aa14.86□□□□□ -0.03
PDPN-206ENST00000488631 NCOA1Q15788 1441 aa14.83□□□□□ -0.03
PDPN-206ENST00000488631 UHRF1BP1Q6BDS2 1440 aa14.83□□□□□ -0.04
PDPN-206ENST00000488631 ERBINQ96RT1 1412 aa14.82□□□□□ -0.04
PDPN-206ENST00000488631 FBXO31Q5XUX0 539 aaPredicted RBP14.81□□□□□ -0.04
PDPN-206ENST00000488631 CLTCQ00610 1675 aaKnown RBP14.81□□□□□ -0.04
PDPN-206ENST00000488631 ANKRD50Q9ULJ7 1429 aa14.8□□□□□ -0.04
PDPN-206ENST00000488631 CROCC2H7BZ55 1655 aa14.8□□□□□ -0.04
PDPN-206ENST00000488631 PTPRKQ15262 1439 aa14.79□□□□□ -0.04
PDPN-206ENST00000488631 KDM5DQ9BY66 1539 aa14.79□□□□□ -0.04
PDPN-206ENST00000488631 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.79□□□□□ -0.04
PDPN-206ENST00000488631 C1QBPQ07021 282 aaKnown RBP14.78□□□□□ -0.04
PDPN-206ENST00000488631 RRBP1Q9P2E9 1410 aaKnown RBP14.77□□□□□ -0.04
PDPN-206ENST00000488631 FBXO41Q8TF61 875 aa14.77□□□□□ -0.05
PDPN-206ENST00000488631 TRIM52Q96A61 297 aa14.77□□□□□ -0.05
PDPN-206ENST00000488631 ADGRL2O95490 1459 aa14.76□□□□□ -0.05
PDPN-206ENST00000488631 ROCK1Q13464 1354 aa14.76□□□□□ -0.05
PDPN-206ENST00000488631 TNRQ92752 1358 aa14.76□□□□□ -0.05
PDPN-206ENST00000488631 STAG3Q9UJ98 1225 aa14.76□□□□□ -0.05
PDPN-206ENST00000488631 C3P01024 1663 aa14.76□□□□□ -0.05
PDPN-206ENST00000488631 LMTK3Q96Q04 1460 aa14.76□□□□□ -0.05
PDPN-206ENST00000488631 NPATQ14207 1427 aa14.75□□□□□ -0.05
PDPN-206ENST00000488631 EIF2AK4Q9P2K8 1649 aaKnown RBP14.74□□□□□ -0.05
PDPN-206ENST00000488631 ABCC3O15438 1527 aa14.73□□□□□ -0.05
PDPN-206ENST00000488631 NUP155O75694 1391 aa14.73□□□□□ -0.05
PDPN-206ENST00000488631 MROH2AA6NES4 1674 aa14.72□□□□□ -0.05
PDPN-206ENST00000488631 PZPP20742 1482 aa14.71□□□□□ -0.05
PDPN-206ENST00000488631 FAM135AQ9P2D6 1515 aa14.71□□□□□ -0.06
PDPN-206ENST00000488631 RNF17Q9BXT8 1623 aaKnown RBP14.7□□□□□ -0.06
PDPN-206ENST00000488631 PREX1Q8TCU6 1659 aa14.7□□□□□ -0.06
PDPN-206ENST00000488631 THEMISQ8N1K5 641 aaPredicted RBP14.69□□□□□ -0.06
PDPN-206ENST00000488631 CHGAP10645 457 aaKnown RBP14.68□□□□□ -0.06
PDPN-206ENST00000488631 NCKAP5LQ9HCH0 1330 aa14.67□□□□□ -0.06
PDPN-206ENST00000488631 PRDM15P57071 1507 aaPredicted RBP14.66□□□□□ -0.06
PDPN-206ENST00000488631 ZC3H13Q5T200 1668 aaKnown RBP14.66□□□□□ -0.06
PDPN-206ENST00000488631 SETD1BQ9UPS6 1966 aaKnown RBP14.65□□□□□ -0.06
PDPN-206ENST00000488631 BCANQ96GW7 911 aa14.65□□□□□ -0.06
PDPN-206ENST00000488631 CEP152O94986 1710 aa14.65□□□□□ -0.06
PDPN-206ENST00000488631 MROH1Q8NDA8 1641 aa14.65□□□□□ -0.06
PDPN-206ENST00000488631 ERVK-7P63135 1459 aa14.64□□□□□ -0.07
PDPN-206ENST00000488631 CAMSAP1Q5T5Y3 1602 aa14.64□□□□□ -0.07
PDPN-206ENST00000488631 ANKLE2Q86XL3 938 aa14.64□□□□□ -0.07
PDPN-206ENST00000488631 A2ML1A8K2U0 1454 aa14.63□□□□□ -0.07
PDPN-206ENST00000488631 PKD2Q13563 968 aa14.63□□□□□ -0.07
PDPN-206ENST00000488631 NAIPQ13075 1403 aa14.63□□□□□ -0.07
PDPN-206ENST00000488631 CEP170BQ9Y4F5 1589 aaPredicted RBP14.63□□□□□ -0.07
PDPN-206ENST00000488631 NLRP1Q9C000 1473 aa14.63□□□□□ -0.07
PDPN-206ENST00000488631 ARHGAP31Q2M1Z3 1444 aa14.62□□□□□ -0.07
PDPN-206ENST00000488631 SLC4A1APQ9BWU0 796 aaKnown RBP14.62□□□□□ -0.07
PDPN-206ENST00000488631 EID1Q9Y6B2 187 aa14.62□□□□□ -0.07
PDPN-206ENST00000488631 MYO3AQ8NEV4 1616 aa14.62□□□□□ -0.07
PDPN-206ENST00000488631 HFM1A2PYH4 1435 aa14.61□□□□□ -0.07
PDPN-206ENST00000488631 DEPDC5O75140 1603 aa14.61□□□□□ -0.07
PDPN-206ENST00000488631 IDI1Q13907 227 aa14.6□□□□□ -0.07
PDPN-206ENST00000488631 SLC52A1Q9NWF4 448 aa14.6□□□□□ -0.07
PDPN-206ENST00000488631 U3KPZ7 1027 aaPredicted RBP14.6□□□□□ -0.07
PDPN-206ENST00000488631 PPP1R15AO75807 674 aaPredicted RBP14.59□□□□□ -0.07
PDPN-206ENST00000488631 SLC4A2P04920 1241 aa14.59□□□□□ -0.07
PDPN-206ENST00000488631 TXNDC2Q86VQ3 553 aa14.59□□□□□ -0.07
PDPN-206ENST00000488631 LMTK2Q8IWU2 1503 aa14.59□□□□□ -0.07
PDPN-206ENST00000488631 UGGT1Q9NYU2 1555 aa14.59□□□□□ -0.07
PDPN-206ENST00000488631 SPATA31D1Q6ZQQ2 1576 aa14.58□□□□□ -0.08
PDPN-206ENST00000488631 CFAP65Q6ZU64 1925 aaKnown RBP14.58□□□□□ -0.08
PDPN-206ENST00000488631 EFCAB6Q5THR3 1501 aa14.57□□□□□ -0.08
PDPN-206ENST00000488631 UNC13BO14795 1591 aa14.56□□□□□ -0.08
PDPN-206ENST00000488631 HDGFP51858 240 aaKnown RBP14.56□□□□□ -0.08
PDPN-206ENST00000488631 ZNF326Q5BKZ1 582 aaKnown RBP14.56□□□□□ -0.08
PDPN-206ENST00000488631 SETD5Q9C0A6 1442 aa14.56□□□□□ -0.08
PDPN-206ENST00000488631 VWDEQ8N2E2 1590 aa14.56□□□□□ -0.08
PDPN-206ENST00000488631 RPRD2Q5VT52 1461 aaKnown RBP14.55□□□□□ -0.08
PDPN-206ENST00000488631 PLA2R1Q13018 1463 aa14.54□□□□□ -0.08
PDPN-206ENST00000488631 TET3O43151 1660 aa14.53□□□□□ -0.08
PDPN-206ENST00000488631 PTPRTO14522 1441 aa14.53□□□□□ -0.08
PDPN-206ENST00000488631 ACIN1Q9UKV3 1341 aaKnown RBP14.53□□□□□ -0.08
PDPN-206ENST00000488631 NOS1P29475 1434 aa14.52□□□□□ -0.08
PDPN-206ENST00000488631 NUTM2DQ5VT03 806 aaPredicted RBP14.52□□□□□ -0.09
PDPN-206ENST00000488631 MPHOSPH9Q99550 1183 aa14.52□□□□□ -0.09
PDPN-206ENST00000488631 ZNF142P52746 1687 aaPredicted RBP14.52□□□□□ -0.09
PDPN-206ENST00000488631 GCC2Q8IWJ2 1684 aa14.52□□□□□ -0.09
PDPN-206ENST00000488631 IQGAP3Q86VI3 1631 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms