RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 RNF17Q9BXT8 1623 aaKnown RBP36.19■■■■□ 3.38
CUL4A-209ENST00000488558 SHANK2Q9UPX8 1470 aa36.18■■■■□ 3.38
CUL4A-209ENST00000488558 DMRT2Q9Y5R5 561 aa36.17■■■■□ 3.38
CUL4A-209ENST00000488558 TCOF1Q13428 1488 aaKnown RBP36.16■■■■□ 3.38
CUL4A-209ENST00000488558 FGD6Q6ZV73 1430 aa36.16■■■■□ 3.38
CUL4A-209ENST00000488558 NCOA1Q15788 1441 aa36.14■■■■□ 3.38
CUL4A-209ENST00000488558 CEP170BQ9Y4F5 1589 aaPredicted RBP36.14■■■■□ 3.38
CUL4A-209ENST00000488558 DNMT1P26358 1616 aaKnown RBP36.12■■■■□ 3.37
CUL4A-209ENST00000488558 PTPRTO14522 1441 aa36.11■■■■□ 3.37
CUL4A-209ENST00000488558 ZC3H13Q5T200 1668 aaKnown RBP36.11■■■■□ 3.37
CUL4A-209ENST00000488558 FBXO41Q8TF61 875 aa36.11■■■■□ 3.37
CUL4A-209ENST00000488558 DUOX2Q9NRD8 1548 aa36.11■■■■□ 3.37
CUL4A-209ENST00000488558 PZPP20742 1482 aa36.11■■■■□ 3.37
CUL4A-209ENST00000488558 CAMSAP1Q5T5Y3 1602 aa36.1■■■■□ 3.37
CUL4A-209ENST00000488558 ABCC5O15440 1437 aa36.08■■■■□ 3.37
CUL4A-209ENST00000488558 WASHC2CQ9Y4E1 1318 aa36.06■■■■□ 3.36
CUL4A-209ENST00000488558 DAPK1P53355 1430 aa36.05■■■■□ 3.36
CUL4A-209ENST00000488558 PLA2R1Q13018 1463 aa36.05■■■■□ 3.36
CUL4A-209ENST00000488558 MROH1Q8NDA8 1641 aa36.04■■■■□ 3.36
CUL4A-209ENST00000488558 A2ML1A8K2U0 1454 aa36.02■■■■□ 3.36
CUL4A-209ENST00000488558 ABCC3O15438 1527 aa36.02■■■■□ 3.36
CUL4A-209ENST00000488558 KIF15Q9NS87 1388 aa35.99■■■■□ 3.35
CUL4A-209ENST00000488558 ERBINQ96RT1 1412 aa35.99■■■■□ 3.35
CUL4A-209ENST00000488558 TNRQ92752 1358 aa35.98■■■■□ 3.35
CUL4A-209ENST00000488558 CERKQ8TCT0 537 aa35.96■■■■□ 3.35
CUL4A-209ENST00000488558 PRDM15P57071 1507 aaPredicted RBP35.95■■■■□ 3.35
CUL4A-209ENST00000488558 CEP152O94986 1710 aa35.91■■■■□ 3.34
CUL4A-209ENST00000488558 DEPDC5O75140 1603 aa35.91■■■■□ 3.34
CUL4A-209ENST00000488558 FBXO31Q5XUX0 539 aaPredicted RBP35.91■■■■□ 3.34
CUL4A-209ENST00000488558 NLRP1Q9C000 1473 aa35.9■■■■□ 3.34
CUL4A-209ENST00000488558 SPATA31D1Q6ZQQ2 1576 aa35.89■■■■□ 3.34
CUL4A-209ENST00000488558 PKD2Q13563 968 aa35.89■■■■□ 3.34
CUL4A-209ENST00000488558 ANKRD30AQ9BXX3 1397 aa35.87■■■■□ 3.33
CUL4A-209ENST00000488558 ADGRL2O95490 1459 aa35.86■■■■□ 3.33
CUL4A-209ENST00000488558 RRP7BPQ9NSQ0 103 aa35.85■■■■□ 3.33
CUL4A-209ENST00000488558 LTBP4Q8N2S1 1624 aa35.84■■■■□ 3.33
CUL4A-209ENST00000488558 POLR1AO95602 1720 aaPredicted RBP35.83■■■■□ 3.33
CUL4A-209ENST00000488558 NCKAP5LQ9HCH0 1330 aa35.83■■■■□ 3.33
CUL4A-209ENST00000488558 ERVK-7P63135 1459 aa35.82■■■■□ 3.32
CUL4A-209ENST00000488558 ARHGAP31Q2M1Z3 1444 aa35.79■■■■□ 3.32
CUL4A-209ENST00000488558 UGGT1Q9NYU2 1555 aa35.78■■■■□ 3.32
CUL4A-209ENST00000488558 IQSEC2Q5JU85 1478 aa35.75■■■■□ 3.31
CUL4A-209ENST00000488558 VWDEQ8N2E2 1590 aa35.74■■■■□ 3.31
CUL4A-209ENST00000488558 NEURL4Q96JN8 1562 aa35.74■■■■□ 3.31
CUL4A-209ENST00000488558 CHIC2Q9UKJ5 165 aa35.74■■■■□ 3.31
CUL4A-209ENST00000488558 FAM50AQ14320 339 aaKnown RBP35.73■■■■□ 3.31
CUL4A-209ENST00000488558 LMTK2Q8IWU2 1503 aa35.73■■■■□ 3.31
CUL4A-209ENST00000488558 KANK1Q14678 1352 aa35.72■■■■□ 3.31
CUL4A-209ENST00000488558 THEMISQ8N1K5 641 aaPredicted RBP35.7■■■■□ 3.31
CUL4A-209ENST00000488558 CFAP65Q6ZU64 1925 aaKnown RBP35.65■■■■□ 3.3
CUL4A-209ENST00000488558 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.65■■■■□ 3.35e-9■■■■□ 24.1
CUL4A-209ENST00000488558 UBR1Q8IWV7 1749 aa35.65■■■■□ 3.3
CUL4A-209ENST00000488558 MED14O60244 1454 aa35.63■■■■□ 3.29
CUL4A-209ENST00000488558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.62■■■■□ 3.297e-7■□□□□ 10.7
CUL4A-209ENST00000488558 ANKRD50Q9ULJ7 1429 aa35.62■■■■□ 3.29
CUL4A-209ENST00000488558 ZNF335Q9H4Z2 1342 aaPredicted RBP35.61■■■■□ 3.29
CUL4A-209ENST00000488558 ANKLE2Q86XL3 938 aa35.61■■■■□ 3.29
CUL4A-209ENST00000488558 EFCAB6Q5THR3 1501 aa35.6■■■■□ 3.29
CUL4A-209ENST00000488558 ROCK1Q13464 1354 aa35.56■■■■□ 3.28
CUL4A-209ENST00000488558 IQGAP1P46940 1657 aa35.56■■■■□ 3.28
CUL4A-209ENST00000488558 KDM5AP29375 1690 aaKnown RBP35.55■■■■□ 3.28
CUL4A-209ENST00000488558 NPHP4O75161 1426 aaPredicted RBP35.54■■■■□ 3.28
CUL4A-209ENST00000488558 UNC13BO14795 1591 aa35.53■■■■□ 3.28
CUL4A-209ENST00000488558 PIK3C2BO00750 1634 aa35.51■■■■□ 3.28
CUL4A-209ENST00000488558 SLIT1O75093 1534 aa35.51■■■■□ 3.27
CUL4A-209ENST00000488558 ARHGAP23Q9P227 1491 aa35.5■■■■□ 3.27
CUL4A-209ENST00000488558 CPS1P31327 1500 aa35.49■■■■□ 3.27
CUL4A-209ENST00000488558 TET3O43151 1660 aa35.49■■■■□ 3.27
CUL4A-209ENST00000488558 RPRD2Q5VT52 1461 aaKnown RBP35.48■■■■□ 3.27
CUL4A-209ENST00000488558 SYNMO15061 1565 aa35.48■■■■□ 3.27
CUL4A-209ENST00000488558 NOS1P29475 1434 aa35.47■■■■□ 3.27
CUL4A-209ENST00000488558 GCC2Q8IWJ2 1684 aa35.45■■■■□ 3.27
CUL4A-209ENST00000488558 SCAF11Q99590 1463 aaKnown RBP35.44■■■■□ 3.26
CUL4A-209ENST00000488558 PPARGC1BQ86YN6 1023 aaKnown RBP35.38■■■■□ 3.25
CUL4A-209ENST00000488558 IQGAP3Q86VI3 1631 aa35.38■■■■□ 3.25
CUL4A-209ENST00000488558 RRBP1Q9P2E9 1410 aaKnown RBP35.37■■■■□ 3.25
CUL4A-209ENST00000488558 ADGRB3O60242 1522 aa35.37■■■■□ 3.25
CUL4A-209ENST00000488558 TMEM2Q9UHN6 1383 aa35.35■■■■□ 3.25
CUL4A-209ENST00000488558 IDI1Q13907 227 aa35.33■■■■□ 3.25
CUL4A-209ENST00000488558 SLC52A1Q9NWF4 448 aa35.32■■■■□ 3.24
CUL4A-209ENST00000488558 E9PCH4 1651 aa35.3■■■■□ 3.24
CUL4A-209ENST00000488558 LTKP29376 864 aa35.29■■■■□ 3.24
CUL4A-209ENST00000488558 TXNDC2Q86VQ3 553 aa35.29■■■■□ 3.24
CUL4A-209ENST00000488558 STAG3Q9UJ98 1225 aa35.29■■■■□ 3.24
CUL4A-209ENST00000488558 EID1Q9Y6B2 187 aa35.29■■■■□ 3.24
CUL4A-209ENST00000488558 STRCP1A6NGW2 1772 aa35.28■■■■□ 3.24
CUL4A-209ENST00000488558 ITGAEP38570 1179 aa35.27■■■■□ 3.24
CUL4A-209ENST00000488558 UBAP1LF5GYI3 381 aa35.26■■■■□ 3.24
CUL4A-209ENST00000488558 TMEM131LA2VDJ0 1609 aa35.19■■■■□ 3.22
CUL4A-209ENST00000488558 NUP155O75694 1391 aa35.19■■■■□ 3.22
CUL4A-209ENST00000488558 LRRC7Q96NW7 1537 aa35.18■■■■□ 3.22
CUL4A-209ENST00000488558 MYO5BQ9ULV0 1848 aa35.18■■■■□ 3.22
CUL4A-209ENST00000488558 ZFYVE9O95405 1425 aa35.12■■■■□ 3.21
CUL4A-209ENST00000488558 TOM1O60784 492 aa35.11■■■■□ 3.21
CUL4A-209ENST00000488558 NAIPQ13075 1403 aa35.09■■■■□ 3.21
CUL4A-209ENST00000488558 ALKQ9UM73 1620 aa35.09■■■■□ 3.21
CUL4A-209ENST00000488558 SPHKAPQ2M3C7 1700 aa35.06■■■■□ 3.2
CUL4A-209ENST00000488558 RIMS2Q9UQ26 1411 aa35.05■■■■□ 3.2
CUL4A-209ENST00000488558 XIRP1Q702N8 1843 aaKnown RBP35.04■■■■□ 3.2
CUL4A-209ENST00000488558 NWD1Q149M9 1564 aa35.03■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms