RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 KDM5DQ9BY66 1539 aa19.78■□□□□ 0.76
TTC3-221ENST00000488522 CAMSAP2Q08AD1 1489 aa19.78■□□□□ 0.76
TTC3-221ENST00000488522 NCOA2Q15596 1464 aa19.78■□□□□ 0.76
TTC3-221ENST00000488522 ZNF335Q9H4Z2 1342 aaPredicted RBP19.77■□□□□ 0.76
TTC3-221ENST00000488522 PZPP20742 1482 aa19.77■□□□□ 0.76
TTC3-221ENST00000488522 ARHGEF5Q12774 1597 aa19.77■□□□□ 0.76
TTC3-221ENST00000488522 RSPH4AQ5TD94 716 aa19.75■□□□□ 0.75
TTC3-221ENST00000488522 POLR1AO95602 1720 aaPredicted RBP19.75■□□□□ 0.75
TTC3-221ENST00000488522 NEURL4Q96JN8 1562 aa19.74■□□□□ 0.75
TTC3-221ENST00000488522 ILDR2Q71H61 639 aa19.74■□□□□ 0.75
TTC3-221ENST00000488522 TNRQ92752 1358 aa19.71■□□□□ 0.75
TTC3-221ENST00000488522 SOCS7O14512 581 aa19.7■□□□□ 0.74
TTC3-221ENST00000488522 MAST1Q9Y2H9 1570 aa19.7■□□□□ 0.74
TTC3-221ENST00000488522 RNF17Q9BXT8 1623 aaKnown RBP19.69■□□□□ 0.74
TTC3-221ENST00000488522 NLRP1Q9C000 1473 aa19.68■□□□□ 0.74
TTC3-221ENST00000488522 CPS1P31327 1500 aa19.68■□□□□ 0.74
TTC3-221ENST00000488522 DEPDC5O75140 1603 aa19.67■□□□□ 0.74
TTC3-221ENST00000488522 KIF3BO15066 747 aa19.67■□□□□ 0.74
TTC3-221ENST00000488522 ZC3H13Q5T200 1668 aaKnown RBP19.66■□□□□ 0.74
TTC3-221ENST00000488522 MED14O60244 1454 aa19.66■□□□□ 0.74
TTC3-221ENST00000488522 FBXO31Q5XUX0 539 aaPredicted RBP19.65■□□□□ 0.74
TTC3-221ENST00000488522 MIA2Q96PC5 1412 aa19.65■□□□□ 0.74
TTC3-221ENST00000488522 LRRC9Q6ZRR7 1453 aa19.65■□□□□ 0.74
TTC3-221ENST00000488522 EIF2AK4Q9P2K8 1649 aaKnown RBP19.65■□□□□ 0.74
TTC3-221ENST00000488522 UBAP1LF5GYI3 381 aa19.64■□□□□ 0.73
TTC3-221ENST00000488522 MAP3K1Q13233 1512 aa19.64■□□□□ 0.73
TTC3-221ENST00000488522 VWDEQ8N2E2 1590 aa19.63■□□□□ 0.73
TTC3-221ENST00000488522 SHANK2Q9UPX8 1470 aa19.63■□□□□ 0.73
TTC3-221ENST00000488522 VPS8Q8N3P4 1428 aa19.63■□□□□ 0.73
TTC3-221ENST00000488522 UGGT1Q9NYU2 1555 aa19.62■□□□□ 0.73
TTC3-221ENST00000488522 ABCC3O15438 1527 aa19.62■□□□□ 0.73
TTC3-221ENST00000488522 WASHC2CQ9Y4E1 1318 aa19.62■□□□□ 0.73
TTC3-221ENST00000488522 MROH1Q8NDA8 1641 aa19.61■□□□□ 0.73
TTC3-221ENST00000488522 TSPY4P0CV99 314 aa19.59■□□□□ 0.73
TTC3-221ENST00000488522 TSPY10P0CW01 314 aa19.59■□□□□ 0.73
TTC3-221ENST00000488522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.58■□□□□ 0.73
TTC3-221ENST00000488522 THEMISQ8N1K5 641 aaPredicted RBP19.58■□□□□ 0.72
TTC3-221ENST00000488522 ANKLE2Q86XL3 938 aa19.57■□□□□ 0.72
TTC3-221ENST00000488522 NPHP4O75161 1426 aaPredicted RBP19.57■□□□□ 0.72
TTC3-221ENST00000488522 IQGAP1P46940 1657 aa19.56■□□□□ 0.72
TTC3-221ENST00000488522 ERVK-7P63135 1459 aa19.56■□□□□ 0.72
TTC3-221ENST00000488522 ALKQ9UM73 1620 aa19.55■□□□□ 0.72
TTC3-221ENST00000488522 MYOM3Q5VTT5 1437 aa19.55■□□□□ 0.72
TTC3-221ENST00000488522 SYNMO15061 1565 aa19.53■□□□□ 0.72
TTC3-221ENST00000488522 PRDM15P57071 1507 aaPredicted RBP19.52■□□□□ 0.72
TTC3-221ENST00000488522 DUOX2Q9NRD8 1548 aa19.52■□□□□ 0.72
TTC3-221ENST00000488522 TOM1O60784 492 aa19.51■□□□□ 0.71
TTC3-221ENST00000488522 CEP152O94986 1710 aa19.51■□□□□ 0.71
TTC3-221ENST00000488522 UBR1Q8IWV7 1749 aa19.51■□□□□ 0.71
TTC3-221ENST00000488522 MED1Q15648 1581 aaPredicted RBP19.5■□□□□ 0.71
TTC3-221ENST00000488522 ARHGAP31Q2M1Z3 1444 aa19.5■□□□□ 0.71
TTC3-221ENST00000488522 STRCP1A6NGW2 1772 aa19.49■□□□□ 0.71
TTC3-221ENST00000488522 CROCC2H7BZ55 1655 aa19.49■□□□□ 0.71
TTC3-221ENST00000488522 ARHGAP23Q9P227 1491 aa19.48■□□□□ 0.71
TTC3-221ENST00000488522 SLIT1O75093 1534 aa19.47■□□□□ 0.71
TTC3-221ENST00000488522 HSPA1LP34931 641 aa19.47■□□□□ 0.71
TTC3-221ENST00000488522 KANK4Q5T7N3 995 aaPredicted RBP19.47■□□□□ 0.71
TTC3-221ENST00000488522 ERBINQ96RT1 1412 aa19.47■□□□□ 0.71
TTC3-221ENST00000488522 LRRC7Q96NW7 1537 aa19.46■□□□□ 0.71
TTC3-221ENST00000488522 SCAF11Q99590 1463 aaKnown RBP19.44■□□□□ 0.7
TTC3-221ENST00000488522 KIF15Q9NS87 1388 aa19.43■□□□□ 0.7
TTC3-221ENST00000488522 ABCC5O15440 1437 aa19.42■□□□□ 0.7
TTC3-221ENST00000488522 PIP4K2BP78356 416 aa19.42■□□□□ 0.7
TTC3-221ENST00000488522 KDM5AP29375 1690 aaKnown RBP19.42■□□□□ 0.7
TTC3-221ENST00000488522 PTPN23Q9H3S7 1636 aa19.41■□□□□ 0.7
TTC3-221ENST00000488522 LMTK2Q8IWU2 1503 aa19.41■□□□□ 0.7
TTC3-221ENST00000488522 SCAF1Q9H7N4 1312 aaKnown RBP19.39■□□□□ 0.69
TTC3-221ENST00000488522 CFAP65Q6ZU64 1925 aaKnown RBP19.39■□□□□ 0.69
TTC3-221ENST00000488522 DAPK1P53355 1430 aa19.37■□□□□ 0.69
TTC3-221ENST00000488522 LOC105371045A0A1W2PR82 267 aa19.37■□□□□ 0.69
TTC3-221ENST00000488522 PIK3C2BO00750 1634 aa19.36■□□□□ 0.69
TTC3-221ENST00000488522 XIRP1Q702N8 1843 aaKnown RBP19.36■□□□□ 0.69
TTC3-221ENST00000488522 FGD6Q6ZV73 1430 aa19.34■□□□□ 0.69
TTC3-221ENST00000488522 LTKP29376 864 aa19.34■□□□□ 0.69
TTC3-221ENST00000488522 TMEM2Q9UHN6 1383 aa19.32■□□□□ 0.68
TTC3-221ENST00000488522 EFCAB6Q5THR3 1501 aa19.31■□□□□ 0.68
TTC3-221ENST00000488522 KANK1Q14678 1352 aa19.31■□□□□ 0.68
TTC3-221ENST00000488522 TXNDC2Q86VQ3 553 aa19.3■□□□□ 0.68
TTC3-221ENST00000488522 RRP7BPQ9NSQ0 103 aa19.3■□□□□ 0.68
TTC3-221ENST00000488522 NOS1P29475 1434 aa19.3■□□□□ 0.68
TTC3-221ENST00000488522 ADGRL2O95490 1459 aa19.29■□□□□ 0.68
TTC3-221ENST00000488522 TET3O43151 1660 aa19.29■□□□□ 0.68
TTC3-221ENST00000488522 ANKRD30AQ9BXX3 1397 aa19.29■□□□□ 0.68
TTC3-221ENST00000488522 EID1Q9Y6B2 187 aa19.27■□□□□ 0.68
TTC3-221ENST00000488522 ADGRB3O60242 1522 aa19.26■□□□□ 0.67
TTC3-221ENST00000488522 NWD1Q149M9 1564 aa19.25■□□□□ 0.67
TTC3-221ENST00000488522 FAM135BQ49AJ0 1406 aa19.25■□□□□ 0.67
TTC3-221ENST00000488522 RPRD2Q5VT52 1461 aaKnown RBP19.23■□□□□ 0.67
TTC3-221ENST00000488522 IDI1Q13907 227 aa19.23■□□□□ 0.67
TTC3-221ENST00000488522 NKTRP30414 1462 aaKnown RBP19.22■□□□□ 0.67
TTC3-221ENST00000488522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.22■□□□□ 0.671e-11■■■■□ 21.1
TTC3-221ENST00000488522 APLP2Q06481 763 aa19.21■□□□□ 0.67
TTC3-221ENST00000488522 KCNA6P17658 529 aa19.2■□□□□ 0.66
TTC3-221ENST00000488522 ADRA2BP18089 450 aa19.2■□□□□ 0.66
TTC3-221ENST00000488522 TMEM94Q12767 1356 aa19.19■□□□□ 0.66
TTC3-221ENST00000488522 SLC52A1Q9NWF4 448 aa19.18■□□□□ 0.66
TTC3-221ENST00000488522 ZFYVE9O95405 1425 aa19.17■□□□□ 0.66
TTC3-221ENST00000488522 STAG3Q9UJ98 1225 aa19.17■□□□□ 0.66
TTC3-221ENST00000488522 CHIC2Q9UKJ5 165 aa19.16■□□□□ 0.66
TTC3-221ENST00000488522 ANKRD50Q9ULJ7 1429 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms