RNA–Protein interactions for RNA: ENST00000488298.5

COL1A2-210, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-210ENST00000488298 IQSEC2Q5JU85 1478 aa18.91■□□□□ 0.62
COL1A2-210ENST00000488298 DHX29Q7Z478 1369 aaKnown RBP18.91■□□□□ 0.62
COL1A2-210ENST00000488298 RSPH4AQ5TD94 716 aa18.9■□□□□ 0.62
COL1A2-210ENST00000488298 ZNF335Q9H4Z2 1342 aaPredicted RBP18.9■□□□□ 0.62
COL1A2-210ENST00000488298 KIF3BO15066 747 aa18.89■□□□□ 0.61
COL1A2-210ENST00000488298 PLA2R1Q13018 1463 aa18.89■□□□□ 0.61
COL1A2-210ENST00000488298 ADGBQ8N7X0 1667 aa18.89■□□□□ 0.61
COL1A2-210ENST00000488298 CCDC141Q6ZP82 1450 aa18.88■□□□□ 0.61
COL1A2-210ENST00000488298 ILDR2Q71H61 639 aa18.87■□□□□ 0.61
COL1A2-210ENST00000488298 CEP170BQ9Y4F5 1589 aaPredicted RBP18.87■□□□□ 0.61
COL1A2-210ENST00000488298 APLP2Q06481 763 aa18.86■□□□□ 0.61
COL1A2-210ENST00000488298 MYO3AQ8NEV4 1616 aa18.85■□□□□ 0.61
COL1A2-210ENST00000488298 PTPN23Q9H3S7 1636 aa18.85■□□□□ 0.61
COL1A2-210ENST00000488298 MAST1Q9Y2H9 1570 aa18.85■□□□□ 0.61
COL1A2-210ENST00000488298 TCOF1Q13428 1488 aaKnown RBP18.85■□□□□ 0.61
COL1A2-210ENST00000488298 UBAP1LF5GYI3 381 aa18.84■□□□□ 0.61
COL1A2-210ENST00000488298 FBXO31Q5XUX0 539 aaPredicted RBP18.84■□□□□ 0.61
COL1A2-210ENST00000488298 ZNF142P52746 1687 aaPredicted RBP18.84■□□□□ 0.61
COL1A2-210ENST00000488298 FGD6Q6ZV73 1430 aa18.83■□□□□ 0.61
COL1A2-210ENST00000488298 WASHC2CQ9Y4E1 1318 aa18.83■□□□□ 0.61
COL1A2-210ENST00000488298 TSPY4P0CV99 314 aa18.83■□□□□ 0.6
COL1A2-210ENST00000488298 TSPY10P0CW01 314 aa18.83■□□□□ 0.6
COL1A2-210ENST00000488298 A2ML1A8K2U0 1454 aa18.83■□□□□ 0.6
COL1A2-210ENST00000488298 CROCC2H7BZ55 1655 aa18.82■□□□□ 0.6
COL1A2-210ENST00000488298 TNRQ92752 1358 aa18.81■□□□□ 0.6
COL1A2-210ENST00000488298 DNMT1P26358 1616 aaKnown RBP18.79■□□□□ 0.6
COL1A2-210ENST00000488298 SOCS7O14512 581 aa18.79■□□□□ 0.6
COL1A2-210ENST00000488298 ABCC5O15440 1437 aa18.77■□□□□ 0.6
COL1A2-210ENST00000488298 THEMISQ8N1K5 641 aaPredicted RBP18.77■□□□□ 0.6
COL1A2-210ENST00000488298 PZPP20742 1482 aa18.77■□□□□ 0.59
COL1A2-210ENST00000488298 KDM5DQ9BY66 1539 aa18.76■□□□□ 0.59
COL1A2-210ENST00000488298 ANKLE2Q86XL3 938 aa18.76■□□□□ 0.59
COL1A2-210ENST00000488298 SHANK2Q9UPX8 1470 aa18.75■□□□□ 0.59
COL1A2-210ENST00000488298 FAM135AQ9P2D6 1515 aa18.74■□□□□ 0.59
COL1A2-210ENST00000488298 SPATA31D1Q6ZQQ2 1576 aa18.74■□□□□ 0.59
COL1A2-210ENST00000488298 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.73■□□□□ 0.59
COL1A2-210ENST00000488298 DAPK1P53355 1430 aa18.73■□□□□ 0.59
COL1A2-210ENST00000488298 TOM1O60784 492 aa18.7■□□□□ 0.58
COL1A2-210ENST00000488298 NLRP1Q9C000 1473 aa18.7■□□□□ 0.58
COL1A2-210ENST00000488298 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
COL1A2-210ENST00000488298 PIP4K2BP78356 416 aa18.68■□□□□ 0.58
COL1A2-210ENST00000488298 RNF17Q9BXT8 1623 aaKnown RBP18.67■□□□□ 0.58
COL1A2-210ENST00000488298 EIF2AK4Q9P2K8 1649 aaKnown RBP18.67■□□□□ 0.58
COL1A2-210ENST00000488298 NEURL4Q96JN8 1562 aa18.67■□□□□ 0.58
COL1A2-210ENST00000488298 UGGT1Q9NYU2 1555 aa18.67■□□□□ 0.58
COL1A2-210ENST00000488298 CPS1P31327 1500 aa18.66■□□□□ 0.58
COL1A2-210ENST00000488298 MROH1Q8NDA8 1641 aa18.66■□□□□ 0.58
COL1A2-210ENST00000488298 ADGRL2O95490 1459 aa18.65■□□□□ 0.58
COL1A2-210ENST00000488298 PPP4R3CPQ6ZMV5 832 aa18.65■□□□□ 0.58
COL1A2-210ENST00000488298 PPARGC1BQ86YN6 1023 aaKnown RBP18.65■□□□□ 0.58
COL1A2-210ENST00000488298 POLR1AO95602 1720 aaPredicted RBP18.65■□□□□ 0.58
COL1A2-210ENST00000488298 DUOX2Q9NRD8 1548 aa18.64■□□□□ 0.58
COL1A2-210ENST00000488298 NPHP4O75161 1426 aaPredicted RBP18.64■□□□□ 0.57
COL1A2-210ENST00000488298 HSPA1LP34931 641 aa18.63■□□□□ 0.57
COL1A2-210ENST00000488298 MED14O60244 1454 aa18.63■□□□□ 0.57
COL1A2-210ENST00000488298 ABCC3O15438 1527 aa18.62■□□□□ 0.57
COL1A2-210ENST00000488298 DEPDC5O75140 1603 aa18.6■□□□□ 0.57
COL1A2-210ENST00000488298 RRBP1Q9P2E9 1410 aaKnown RBP18.6■□□□□ 0.57
COL1A2-210ENST00000488298 KIF15Q9NS87 1388 aa18.6■□□□□ 0.57
COL1A2-210ENST00000488298 VWDEQ8N2E2 1590 aa18.59■□□□□ 0.57
COL1A2-210ENST00000488298 ERVK-7P63135 1459 aa18.58■□□□□ 0.57
COL1A2-210ENST00000488298 ERBINQ96RT1 1412 aa18.58■□□□□ 0.57
COL1A2-210ENST00000488298 ZC3H13Q5T200 1668 aaKnown RBP18.57■□□□□ 0.56
COL1A2-210ENST00000488298 PRDM15P57071 1507 aaPredicted RBP18.56■□□□□ 0.56
COL1A2-210ENST00000488298 FAM50AQ14320 339 aaKnown RBP18.56■□□□□ 0.56
COL1A2-210ENST00000488298 RRP7BPQ9NSQ0 103 aa18.56■□□□□ 0.56
COL1A2-210ENST00000488298 ANKRD30AQ9BXX3 1397 aa18.55■□□□□ 0.56
COL1A2-210ENST00000488298 CHIC2Q9UKJ5 165 aa18.55■□□□□ 0.56
COL1A2-210ENST00000488298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.54■□□□□ 0.56
COL1A2-210ENST00000488298 CEP152O94986 1710 aa18.54■□□□□ 0.56
COL1A2-210ENST00000488298 TXNDC2Q86VQ3 553 aa18.53■□□□□ 0.56
COL1A2-210ENST00000488298 IQGAP1P46940 1657 aa18.53■□□□□ 0.56
COL1A2-210ENST00000488298 LTKP29376 864 aa18.52■□□□□ 0.56
COL1A2-210ENST00000488298 ROCK1Q13464 1354 aa18.52■□□□□ 0.55
COL1A2-210ENST00000488298 CFAP65Q6ZU64 1925 aaKnown RBP18.51■□□□□ 0.55
COL1A2-210ENST00000488298 EID1Q9Y6B2 187 aa18.51■□□□□ 0.55
COL1A2-210ENST00000488298 ARHGAP31Q2M1Z3 1444 aa18.5■□□□□ 0.55
COL1A2-210ENST00000488298 LRRC7Q96NW7 1537 aa18.5■□□□□ 0.55
COL1A2-210ENST00000488298 STAG3Q9UJ98 1225 aa18.49■□□□□ 0.55
COL1A2-210ENST00000488298 SCAF11Q99590 1463 aaKnown RBP18.49■□□□□ 0.55
COL1A2-210ENST00000488298 KANK1Q14678 1352 aa18.48■□□□□ 0.55
COL1A2-210ENST00000488298 MED1Q15648 1581 aaPredicted RBP18.47■□□□□ 0.55
COL1A2-210ENST00000488298 UBR1Q8IWV7 1749 aa18.47■□□□□ 0.55
COL1A2-210ENST00000488298 MAPK8IP2Q13387 824 aaPredicted RBP18.47■□□□□ 0.55
COL1A2-210ENST00000488298 LMTK2Q8IWU2 1503 aa18.47■□□□□ 0.55
COL1A2-210ENST00000488298 ARHGAP23Q9P227 1491 aa18.46■□□□□ 0.55
COL1A2-210ENST00000488298 ALKQ9UM73 1620 aa18.46■□□□□ 0.55
COL1A2-210ENST00000488298 ANKRD50Q9ULJ7 1429 aa18.46■□□□□ 0.55
COL1A2-210ENST00000488298 STRCP1A6NGW2 1772 aa18.45■□□□□ 0.54
COL1A2-210ENST00000488298 UNC13BO14795 1591 aa18.45■□□□□ 0.54
COL1A2-210ENST00000488298 SLIT1O75093 1534 aa18.44■□□□□ 0.54
COL1A2-210ENST00000488298 IDI1Q13907 227 aa18.43■□□□□ 0.54
COL1A2-210ENST00000488298 TMEM2Q9UHN6 1383 aa18.42■□□□□ 0.54
COL1A2-210ENST00000488298 SYNMO15061 1565 aa18.42■□□□□ 0.54
COL1A2-210ENST00000488298 GCC2Q8IWJ2 1684 aa18.4■□□□□ 0.54
COL1A2-210ENST00000488298 EFCAB6Q5THR3 1501 aa18.39■□□□□ 0.53
COL1A2-210ENST00000488298 PIK3C2BO00750 1634 aa18.38■□□□□ 0.53
COL1A2-210ENST00000488298 ITGAEP38570 1179 aa18.37■□□□□ 0.53
COL1A2-210ENST00000488298 NAIPQ13075 1403 aa18.37■□□□□ 0.53
COL1A2-210ENST00000488298 IQGAP3Q86VI3 1631 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms