RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ZNF142P52746 1687 aaPredicted RBP17.69■□□□□ 0.42
NIPAL3-207ENST00000488155 WASHC2CQ9Y4E1 1318 aa17.69■□□□□ 0.42
NIPAL3-207ENST00000488155 FBXO31Q5XUX0 539 aaPredicted RBP17.68■□□□□ 0.42
NIPAL3-207ENST00000488155 CROCC2H7BZ55 1655 aa17.67■□□□□ 0.42
NIPAL3-207ENST00000488155 CEP170BQ9Y4F5 1589 aaPredicted RBP17.67■□□□□ 0.42
NIPAL3-207ENST00000488155 NCOA1Q15788 1441 aa17.67■□□□□ 0.42
NIPAL3-207ENST00000488155 NCKAP5LQ9HCH0 1330 aa17.67■□□□□ 0.42
NIPAL3-207ENST00000488155 KDM5DQ9BY66 1539 aa17.67■□□□□ 0.42
NIPAL3-207ENST00000488155 CEP152O94986 1710 aa17.66■□□□□ 0.42
NIPAL3-207ENST00000488155 PTPRTO14522 1441 aa17.64■□□□□ 0.42
NIPAL3-207ENST00000488155 RNF17Q9BXT8 1623 aaKnown RBP17.63■□□□□ 0.41
NIPAL3-207ENST00000488155 TNRQ92752 1358 aa17.62■□□□□ 0.41
NIPAL3-207ENST00000488155 ABCC5O15440 1437 aa17.62■□□□□ 0.41
NIPAL3-207ENST00000488155 DNMT1P26358 1616 aaKnown RBP17.61■□□□□ 0.41
NIPAL3-207ENST00000488155 EIF2AK4Q9P2K8 1649 aaKnown RBP17.61■□□□□ 0.41
NIPAL3-207ENST00000488155 RRP7BPQ9NSQ0 103 aa17.61■□□□□ 0.41
NIPAL3-207ENST00000488155 CHIC2Q9UKJ5 165 aa17.61■□□□□ 0.41
NIPAL3-207ENST00000488155 FGD6Q6ZV73 1430 aa17.61■□□□□ 0.41
NIPAL3-207ENST00000488155 PZPP20742 1482 aa17.61■□□□□ 0.41
NIPAL3-207ENST00000488155 A2ML1A8K2U0 1454 aa17.6■□□□□ 0.41
NIPAL3-207ENST00000488155 DUOX2Q9NRD8 1548 aa17.59■□□□□ 0.41
NIPAL3-207ENST00000488155 FAM135AQ9P2D6 1515 aa17.59■□□□□ 0.41
NIPAL3-207ENST00000488155 DAPK1P53355 1430 aa17.59■□□□□ 0.41
NIPAL3-207ENST00000488155 POLR1AO95602 1720 aaPredicted RBP17.58■□□□□ 0.41
NIPAL3-207ENST00000488155 ZC3H13Q5T200 1668 aaKnown RBP17.58■□□□□ 0.41
NIPAL3-207ENST00000488155 MROH1Q8NDA8 1641 aa17.58■□□□□ 0.41
NIPAL3-207ENST00000488155 ABCC3O15438 1527 aa17.58■□□□□ 0.41
NIPAL3-207ENST00000488155 KIF15Q9NS87 1388 aa17.58■□□□□ 0.4
NIPAL3-207ENST00000488155 PLA2R1Q13018 1463 aa17.56■□□□□ 0.4
NIPAL3-207ENST00000488155 TCOF1Q13428 1488 aaKnown RBP17.56■□□□□ 0.4
NIPAL3-207ENST00000488155 SHANK2Q9UPX8 1470 aa17.56■□□□□ 0.4
NIPAL3-207ENST00000488155 FAM50AQ14320 339 aaKnown RBP17.56■□□□□ 0.4
NIPAL3-207ENST00000488155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.56■□□□□ 0.4
NIPAL3-207ENST00000488155 LTBP4Q8N2S1 1624 aa17.56■□□□□ 0.4
NIPAL3-207ENST00000488155 PKD2Q13563 968 aa17.55■□□□□ 0.4
NIPAL3-207ENST00000488155 ZNF335Q9H4Z2 1342 aaPredicted RBP17.53■□□□□ 0.4
NIPAL3-207ENST00000488155 PPARGC1BQ86YN6 1023 aaKnown RBP17.52■□□□□ 0.4
NIPAL3-207ENST00000488155 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.52■□□□□ 0.39
NIPAL3-207ENST00000488155 UGGT1Q9NYU2 1555 aa17.51■□□□□ 0.39
NIPAL3-207ENST00000488155 ERBINQ96RT1 1412 aa17.5■□□□□ 0.39
NIPAL3-207ENST00000488155 ANKRD30AQ9BXX3 1397 aa17.5■□□□□ 0.39
NIPAL3-207ENST00000488155 ERVK-7P63135 1459 aa17.5■□□□□ 0.39
NIPAL3-207ENST00000488155 NLRP1Q9C000 1473 aa17.5■□□□□ 0.39
NIPAL3-207ENST00000488155 SPATA31D1Q6ZQQ2 1576 aa17.49■□□□□ 0.39
NIPAL3-207ENST00000488155 NEURL4Q96JN8 1562 aa17.49■□□□□ 0.39
NIPAL3-207ENST00000488155 PRDM15P57071 1507 aaPredicted RBP17.48■□□□□ 0.39
NIPAL3-207ENST00000488155 DEPDC5O75140 1603 aa17.48■□□□□ 0.39
NIPAL3-207ENST00000488155 THEMISQ8N1K5 641 aaPredicted RBP17.48■□□□□ 0.39
NIPAL3-207ENST00000488155 ANKLE2Q86XL3 938 aa17.47■□□□□ 0.39
NIPAL3-207ENST00000488155 UBR1Q8IWV7 1749 aa17.46■□□□□ 0.39
NIPAL3-207ENST00000488155 KANK1Q14678 1352 aa17.44■□□□□ 0.38
NIPAL3-207ENST00000488155 IQGAP1P46940 1657 aa17.42■□□□□ 0.38
NIPAL3-207ENST00000488155 ADGRL2O95490 1459 aa17.42■□□□□ 0.38
NIPAL3-207ENST00000488155 ITGAEP38570 1179 aa17.41■□□□□ 0.38
NIPAL3-207ENST00000488155 PIK3C2BO00750 1634 aa17.4■□□□□ 0.38
NIPAL3-207ENST00000488155 NPHP4O75161 1426 aaPredicted RBP17.4■□□□□ 0.38
NIPAL3-207ENST00000488155 ARHGAP31Q2M1Z3 1444 aa17.4■□□□□ 0.38
NIPAL3-207ENST00000488155 IQSEC2Q5JU85 1478 aa17.4■□□□□ 0.38
NIPAL3-207ENST00000488155 UBAP1LF5GYI3 381 aa17.39■□□□□ 0.37
NIPAL3-207ENST00000488155 ANKRD50Q9ULJ7 1429 aa17.38■□□□□ 0.37
NIPAL3-207ENST00000488155 VWDEQ8N2E2 1590 aa17.38■□□□□ 0.37
NIPAL3-207ENST00000488155 STRCP1A6NGW2 1772 aa17.38■□□□□ 0.37
NIPAL3-207ENST00000488155 MYO5BQ9ULV0 1848 aa17.37■□□□□ 0.37
NIPAL3-207ENST00000488155 STAG3Q9UJ98 1225 aa17.37■□□□□ 0.37
NIPAL3-207ENST00000488155 MED14O60244 1454 aa17.36■□□□□ 0.37
NIPAL3-207ENST00000488155 LMTK2Q8IWU2 1503 aa17.36■□□□□ 0.37
NIPAL3-207ENST00000488155 SYNMO15061 1565 aa17.34■□□□□ 0.37
NIPAL3-207ENST00000488155 LTKP29376 864 aa17.34■□□□□ 0.37
NIPAL3-207ENST00000488155 EFCAB6Q5THR3 1501 aa17.34■□□□□ 0.37
NIPAL3-207ENST00000488155 TXNDC2Q86VQ3 553 aa17.34■□□□□ 0.37
NIPAL3-207ENST00000488155 IDI1Q13907 227 aa17.33■□□□□ 0.36
NIPAL3-207ENST00000488155 CPS1P31327 1500 aa17.32■□□□□ 0.36
NIPAL3-207ENST00000488155 SCAF11Q99590 1463 aaKnown RBP17.32■□□□□ 0.36
NIPAL3-207ENST00000488155 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
NIPAL3-207ENST00000488155 TET3O43151 1660 aa17.32■□□□□ 0.36
NIPAL3-207ENST00000488155 GCC2Q8IWJ2 1684 aa17.32■□□□□ 0.36
NIPAL3-207ENST00000488155 SLIT1O75093 1534 aa17.31■□□□□ 0.36
NIPAL3-207ENST00000488155 ARHGAP23Q9P227 1491 aa17.31■□□□□ 0.36
NIPAL3-207ENST00000488155 PIP4K2BP78356 416 aa17.3■□□□□ 0.36
NIPAL3-207ENST00000488155 EID1Q9Y6B2 187 aa17.3■□□□□ 0.36
NIPAL3-207ENST00000488155 UNC13BO14795 1591 aa17.29■□□□□ 0.36
NIPAL3-207ENST00000488155 SENP3Q9H4L4 574 aaPredicted RBP17.29■□□□□ 0.36
NIPAL3-207ENST00000488155 KDM5AP29375 1690 aaKnown RBP17.29■□□□□ 0.36
NIPAL3-207ENST00000488155 NOS1P29475 1434 aa17.29■□□□□ 0.36
NIPAL3-207ENST00000488155 E9PCH4 1651 aa17.28■□□□□ 0.36
NIPAL3-207ENST00000488155 TMEM2Q9UHN6 1383 aa17.28■□□□□ 0.36
NIPAL3-207ENST00000488155 ROCK1Q13464 1354 aa17.27■□□□□ 0.35
NIPAL3-207ENST00000488155 DISP3Q9P2K9 1392 aa17.26■□□□□ 0.35
NIPAL3-207ENST00000488155 ADGRB3O60242 1522 aa17.26■□□□□ 0.35
NIPAL3-207ENST00000488155 XIRP1Q702N8 1843 aaKnown RBP17.26■□□□□ 0.35
NIPAL3-207ENST00000488155 TOM1O60784 492 aa17.25■□□□□ 0.35
NIPAL3-207ENST00000488155 CHGAP10645 457 aaKnown RBP17.24■□□□□ 0.35
NIPAL3-207ENST00000488155 SLC52A1Q9NWF4 448 aa17.24■□□□□ 0.35
NIPAL3-207ENST00000488155 IQGAP3Q86VI3 1631 aa17.24■□□□□ 0.35
NIPAL3-207ENST00000488155 RPRD2Q5VT52 1461 aaKnown RBP17.24■□□□□ 0.35
NIPAL3-207ENST00000488155 LRRC7Q96NW7 1537 aa17.23■□□□□ 0.35
NIPAL3-207ENST00000488155 BCANQ96GW7 911 aa17.23■□□□□ 0.35
NIPAL3-207ENST00000488155 SLC26A8Q96RN1 970 aa17.22■□□□□ 0.35
NIPAL3-207ENST00000488155 NUP155O75694 1391 aa17.22■□□□□ 0.35
NIPAL3-207ENST00000488155 TMEM131LA2VDJ0 1609 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms