RNA–Protein interactions for RNA: ENST00000487902.5

PDE6B-210, Transcript of phosphodiesterase 6B, humanhuman

TSL 3

Gene PDE6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-210ENST00000487902 ERBINQ96RT1 1412 aa27.09■■□□□ 1.93
PDE6B-210ENST00000487902 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.09■■□□□ 1.93
PDE6B-210ENST00000487902 NPATQ14207 1427 aa27.07■■□□□ 1.92
PDE6B-210ENST00000487902 LMTK3Q96Q04 1460 aa27.07■■□□□ 1.92
PDE6B-210ENST00000487902 KDM5DQ9BY66 1539 aa27.07■■□□□ 1.92
PDE6B-210ENST00000487902 PPARGC1BQ86YN6 1023 aaKnown RBP27.07■■□□□ 1.92
PDE6B-210ENST00000487902 RRP7BPQ9NSQ0 103 aa27.07■■□□□ 1.92
PDE6B-210ENST00000487902 RNF17Q9BXT8 1623 aaKnown RBP27.07■■□□□ 1.92
PDE6B-210ENST00000487902 WASHC2CQ9Y4E1 1318 aa27.06■■□□□ 1.92
PDE6B-210ENST00000487902 ADGRL2O95490 1459 aa27.06■■□□□ 1.92
PDE6B-210ENST00000487902 CHIC2Q9UKJ5 165 aa27.05■■□□□ 1.92
PDE6B-210ENST00000487902 UHRF1BP1Q6BDS2 1440 aa27.05■■□□□ 1.92
PDE6B-210ENST00000487902 NCOA1Q15788 1441 aa27.04■■□□□ 1.92
PDE6B-210ENST00000487902 ZC3H13Q5T200 1668 aaKnown RBP27.01■■□□□ 1.92
PDE6B-210ENST00000487902 ROCK1Q13464 1354 aa26.96■■□□□ 1.91
PDE6B-210ENST00000487902 KANK1Q14678 1352 aa26.96■■□□□ 1.91
PDE6B-210ENST00000487902 PTPRKQ15262 1439 aa26.95■■□□□ 1.9
PDE6B-210ENST00000487902 RRBP1Q9P2E9 1410 aaKnown RBP26.95■■□□□ 1.9
PDE6B-210ENST00000487902 PZPP20742 1482 aa26.93■■□□□ 1.9
PDE6B-210ENST00000487902 PRDM15P57071 1507 aaPredicted RBP26.93■■□□□ 1.9
PDE6B-210ENST00000487902 ABCC3O15438 1527 aa26.92■■□□□ 1.9
PDE6B-210ENST00000487902 ANKRD50Q9ULJ7 1429 aa26.91■■□□□ 1.9
PDE6B-210ENST00000487902 DEPDC5O75140 1603 aa26.91■■□□□ 1.9
PDE6B-210ENST00000487902 MROH1Q8NDA8 1641 aa26.91■■□□□ 1.9
PDE6B-210ENST00000487902 HSPA2P54652 639 aa26.9■■□□□ 1.9
PDE6B-210ENST00000487902 ITGAEP38570 1179 aa26.87■■□□□ 1.89
PDE6B-210ENST00000487902 MYO3AQ8NEV4 1616 aa26.86■■□□□ 1.89
PDE6B-210ENST00000487902 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.85■■□□□ 1.89
PDE6B-210ENST00000487902 CEP152O94986 1710 aa26.85■■□□□ 1.89
PDE6B-210ENST00000487902 TNRQ92752 1358 aa26.84■■□□□ 1.89
PDE6B-210ENST00000487902 CAMSAP1Q5T5Y3 1602 aa26.84■■□□□ 1.89
PDE6B-210ENST00000487902 ZNF142P52746 1687 aaPredicted RBP26.84■■□□□ 1.89
PDE6B-210ENST00000487902 DMRT2Q9Y5R5 561 aa26.83■■□□□ 1.89
PDE6B-210ENST00000487902 ARHGAP31Q2M1Z3 1444 aa26.82■■□□□ 1.88
PDE6B-210ENST00000487902 CEP170BQ9Y4F5 1589 aaPredicted RBP26.8■■□□□ 1.88
PDE6B-210ENST00000487902 FBXO31Q5XUX0 539 aaPredicted RBP26.8■■□□□ 1.88
PDE6B-210ENST00000487902 LMTK2Q8IWU2 1503 aa26.8■■□□□ 1.88
PDE6B-210ENST00000487902 A2ML1A8K2U0 1454 aa26.79■■□□□ 1.88
PDE6B-210ENST00000487902 NLRP1Q9C000 1473 aa26.79■■□□□ 1.88
PDE6B-210ENST00000487902 VWDEQ8N2E2 1590 aa26.78■■□□□ 1.88
PDE6B-210ENST00000487902 SPATA31D1Q6ZQQ2 1576 aa26.77■■□□□ 1.88
PDE6B-210ENST00000487902 ERVK-7P63135 1459 aa26.75■■□□□ 1.87
PDE6B-210ENST00000487902 UNC13BO14795 1591 aa26.73■■□□□ 1.87
PDE6B-210ENST00000487902 PLA2R1Q13018 1463 aa26.73■■□□□ 1.87
PDE6B-210ENST00000487902 CFAP65Q6ZU64 1925 aaKnown RBP26.71■■□□□ 1.87
PDE6B-210ENST00000487902 STRCQ7RTU9 1775 aa26.7■■□□□ 1.86
PDE6B-210ENST00000487902 EFCAB6Q5THR3 1501 aa26.7■■□□□ 1.86
PDE6B-210ENST00000487902 THEMISQ8N1K5 641 aaPredicted RBP26.69■■□□□ 1.86
PDE6B-210ENST00000487902 RPRD2Q5VT52 1461 aaKnown RBP26.68■■□□□ 1.86
PDE6B-210ENST00000487902 PKD2Q13563 968 aa26.68■■□□□ 1.86
PDE6B-210ENST00000487902 TET3O43151 1660 aa26.67■■□□□ 1.86
PDE6B-210ENST00000487902 UGGT1Q9NYU2 1555 aa26.67■■□□□ 1.86
PDE6B-210ENST00000487902 PTPRTO14522 1441 aa26.66■■□□□ 1.86
PDE6B-210ENST00000487902 GCC2Q8IWJ2 1684 aa26.65■■□□□ 1.86
PDE6B-210ENST00000487902 NUP155O75694 1391 aa26.63■■□□□ 1.85
PDE6B-210ENST00000487902 IQGAP3Q86VI3 1631 aa26.63■■□□□ 1.85
PDE6B-210ENST00000487902 HFM1A2PYH4 1435 aa26.63■■□□□ 1.85
PDE6B-210ENST00000487902 NAIPQ13075 1403 aa26.62■■□□□ 1.85
PDE6B-210ENST00000487902 NOS1P29475 1434 aa26.57■■□□□ 1.84
PDE6B-210ENST00000487902 ANKLE2Q86XL3 938 aa26.57■■□□□ 1.84
PDE6B-210ENST00000487902 SLC52A1Q9NWF4 448 aa26.57■■□□□ 1.84
PDE6B-210ENST00000487902 STAG3Q9UJ98 1225 aa26.56■■□□□ 1.84
PDE6B-210ENST00000487902 NCKAP5LQ9HCH0 1330 aa26.56■■□□□ 1.84
PDE6B-210ENST00000487902 POLR1AO95602 1720 aaPredicted RBP26.56■■□□□ 1.84
PDE6B-210ENST00000487902 ACIN1Q9UKV3 1341 aaKnown RBP26.55■■□□□ 1.84
PDE6B-210ENST00000487902 KDM5AP29375 1690 aaKnown RBP26.54■■□□□ 1.84
PDE6B-210ENST00000487902 UBR1Q8IWV7 1749 aa26.53■■□□□ 1.84
PDE6B-210ENST00000487902 E9PCH4 1651 aa26.5■■□□□ 1.83
PDE6B-210ENST00000487902 SYNMO15061 1565 aa26.5■■□□□ 1.83
PDE6B-210ENST00000487902 PIK3C2BO00750 1634 aa26.5■■□□□ 1.83
PDE6B-210ENST00000487902 IDI1Q13907 227 aa26.49■■□□□ 1.83
PDE6B-210ENST00000487902 TRIM52Q96A61 297 aa26.47■■□□□ 1.83
PDE6B-210ENST00000487902 EID1Q9Y6B2 187 aa26.47■■□□□ 1.83
PDE6B-210ENST00000487902 SLIT1O75093 1534 aa26.45■■□□□ 1.83
PDE6B-210ENST00000487902 MED14O60244 1454 aa26.45■■□□□ 1.82
PDE6B-210ENST00000487902 ADGRB3O60242 1522 aa26.44■■□□□ 1.82
PDE6B-210ENST00000487902 NEURL4Q96JN8 1562 aa26.43■■□□□ 1.82
PDE6B-210ENST00000487902 ARHGAP23Q9P227 1491 aa26.42■■□□□ 1.82
PDE6B-210ENST00000487902 NPHP4O75161 1426 aaPredicted RBP26.42■■□□□ 1.82
PDE6B-210ENST00000487902 SCAF11Q99590 1463 aaKnown RBP26.42■■□□□ 1.82
PDE6B-210ENST00000487902 HDGFP51858 240 aaKnown RBP26.41■■□□□ 1.82
PDE6B-210ENST00000487902 TMEM2Q9UHN6 1383 aa26.41■■□□□ 1.82
PDE6B-210ENST00000487902 CERKQ8TCT0 537 aa26.4■■□□□ 1.82
PDE6B-210ENST00000487902 TXNDC2Q86VQ3 553 aa26.39■■□□□ 1.82
PDE6B-210ENST00000487902 IQGAP1P46940 1657 aa26.38■■□□□ 1.81
PDE6B-210ENST00000487902 SPHKAPQ2M3C7 1700 aa26.38■■□□□ 1.81
PDE6B-210ENST00000487902 SLC4A1APQ9BWU0 796 aaKnown RBP26.37■■□□□ 1.81
PDE6B-210ENST00000487902 SETD5Q9C0A6 1442 aa26.36■■□□□ 1.81
PDE6B-210ENST00000487902 FBXO41Q8TF61 875 aa26.33■■□□□ 1.81
PDE6B-210ENST00000487902 TMEM131LA2VDJ0 1609 aa26.32■■□□□ 1.8
PDE6B-210ENST00000487902 CHGAP10645 457 aaKnown RBP26.32■■□□□ 1.8
PDE6B-210ENST00000487902 LTBP4Q8N2S1 1624 aa26.32■■□□□ 1.8
PDE6B-210ENST00000487902 IQSEC2Q5JU85 1478 aa26.31■■□□□ 1.8
PDE6B-210ENST00000487902 LTKP29376 864 aa26.31■■□□□ 1.8
PDE6B-210ENST00000487902 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.31■■□□□ 1.8
PDE6B-210ENST00000487902 ZNF335Q9H4Z2 1342 aaPredicted RBP26.31■■□□□ 1.8
PDE6B-210ENST00000487902 TRPM2O94759 1503 aa26.29■■□□□ 1.8
PDE6B-210ENST00000487902 MYO5BQ9ULV0 1848 aa26.28■■□□□ 1.8
PDE6B-210ENST00000487902 CPS1P31327 1500 aa26.27■■□□□ 1.8
PDE6B-210ENST00000487902 PPP1R15AO75807 674 aaPredicted RBP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms