RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 ISY1Q9ULR0 285 aaKnown RBP19.23■□□□□ 0.67
HLA-DQB1-209ENST00000487676 E9PSI1 815 aa19.22■□□□□ 0.67
HLA-DQB1-209ENST00000487676 ZMYND15Q9H091 742 aa19.22■□□□□ 0.67
HLA-DQB1-209ENST00000487676 NAIPQ13075 1403 aa19.22■□□□□ 0.67
HLA-DQB1-209ENST00000487676 ANKRD30AQ9BXX3 1397 aa19.22■□□□□ 0.67
HLA-DQB1-209ENST00000487676 CCDC146Q8IYE0 955 aa19.21■□□□□ 0.67
HLA-DQB1-209ENST00000487676 COG6Q9Y2V7 657 aa19.21■□□□□ 0.67
HLA-DQB1-209ENST00000487676 KIAA2012Q0VF49 1180 aa19.21■□□□□ 0.67
HLA-DQB1-209ENST00000487676 ESPNB1AK53 854 aa19.2■□□□□ 0.66
HLA-DQB1-209ENST00000487676 NCOA2Q15596 1464 aa19.2■□□□□ 0.66
HLA-DQB1-209ENST00000487676 DDX49Q9Y6V7 483 aaKnown RBP19.2■□□□□ 0.66
HLA-DQB1-209ENST00000487676 CFAP44Q96MT7 982 aa19.19■□□□□ 0.66
HLA-DQB1-209ENST00000487676 PODXL2Q9NZ53 605 aa19.18■□□□□ 0.66
HLA-DQB1-209ENST00000487676 CLUAP1Q96AJ1 413 aa19.17■□□□□ 0.66
HLA-DQB1-209ENST00000487676 MIA2Q96PC5 1412 aa19.17■□□□□ 0.66
HLA-DQB1-209ENST00000487676 PLCB2Q00722 1185 aa19.16■□□□□ 0.66
HLA-DQB1-209ENST00000487676 MTERF4Q7Z6M4 381 aaKnown RBP19.16■□□□□ 0.66
HLA-DQB1-209ENST00000487676 SKAP1Q86WV1 359 aa19.16■□□□□ 0.66
HLA-DQB1-209ENST00000487676 CHGAP10645 457 aaKnown RBP19.16■□□□□ 0.66
HLA-DQB1-209ENST00000487676 MCM4P33991 863 aa19.15■□□□□ 0.66
HLA-DQB1-209ENST00000487676 NGEFQ8N5V2 710 aa19.15■□□□□ 0.66
HLA-DQB1-209ENST00000487676 GRPEL1Q9HAV7 217 aa19.14■□□□□ 0.66
HLA-DQB1-209ENST00000487676 C22orf23Q9BZE7 217 aa19.14■□□□□ 0.65
HLA-DQB1-209ENST00000487676 AAMPQ13685 434 aa19.13■□□□□ 0.65
HLA-DQB1-209ENST00000487676 CSPP1Q1MSJ5 1256 aa19.13■□□□□ 0.65
HLA-DQB1-209ENST00000487676 FOXD4L1Q9NU39 408 aa19.13■□□□□ 0.65
HLA-DQB1-209ENST00000487676 APAF1O14727 1248 aa19.12■□□□□ 0.65
HLA-DQB1-209ENST00000487676 RNF123Q5XPI4 1314 aa19.12■□□□□ 0.65
HLA-DQB1-209ENST00000487676 ITPRIPQ8IWB1 547 aa19.12■□□□□ 0.65
HLA-DQB1-209ENST00000487676 IPO8O15397 1037 aaKnown RBP19.12■□□□□ 0.65
HLA-DQB1-209ENST00000487676 ADAMTS8Q9UP79 889 aa19.11■□□□□ 0.65
HLA-DQB1-209ENST00000487676 CLCN1P35523 988 aa19.1■□□□□ 0.65
HLA-DQB1-209ENST00000487676 NASPP49321 788 aaPredicted RBP19.1■□□□□ 0.65
HLA-DQB1-209ENST00000487676 MORC1Q86VD1 984 aa19.1■□□□□ 0.65
HLA-DQB1-209ENST00000487676 SYAP1Q96A49 352 aaPredicted RBP19.09■□□□□ 0.65
HLA-DQB1-209ENST00000487676 R3HCC1Q9Y3T6 440 aaKnown RBP19.09■□□□□ 0.65
HLA-DQB1-209ENST00000487676 ZBTB7CA1YPR0 619 aa19.09■□□□□ 0.65
HLA-DQB1-209ENST00000487676 KIAA1211Q6ZU35 1233 aa19.08■□□□□ 0.65
HLA-DQB1-209ENST00000487676 CCDC173Q0VFZ6 552 aa19.08■□□□□ 0.64
HLA-DQB1-209ENST00000487676 FGD5Q6ZNL6 1462 aa19.07■□□□□ 0.64
HLA-DQB1-209ENST00000487676 PDCL3Q9H2J4 239 aa19.07■□□□□ 0.64
HLA-DQB1-209ENST00000487676 PDE3AQ14432 1141 aa19.06■□□□□ 0.64
HLA-DQB1-209ENST00000487676 SMC4Q9NTJ3 1288 aa19.05■□□□□ 0.64
HLA-DQB1-209ENST00000487676 CFTRP13569 1480 aa19.05■□□□□ 0.64
HLA-DQB1-209ENST00000487676 TPRNQ4KMQ1 711 aa19.05■□□□□ 0.64
HLA-DQB1-209ENST00000487676 C20orf194Q5TEA3 1177 aa19.04■□□□□ 0.64
HLA-DQB1-209ENST00000487676 PANK1Q8TE04 598 aa19.04■□□□□ 0.64
HLA-DQB1-209ENST00000487676 A0A0U1RQG5 324 aaPredicted RBP19.04■□□□□ 0.64
HLA-DQB1-209ENST00000487676 RBM10P98175 930 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB1-209ENST00000487676 EFCAB5A4FU69 1503 aa19.03■□□□□ 0.64
HLA-DQB1-209ENST00000487676 BCL2L13Q9BXK5 485 aa19.03■□□□□ 0.64
HLA-DQB1-209ENST00000487676 CADPSQ9ULU8 1353 aa19.03■□□□□ 0.64
HLA-DQB1-209ENST00000487676 U2SURPO15042 1029 aaKnown RBP19.02■□□□□ 0.64
HLA-DQB1-209ENST00000487676 ZKSCAN2Q63HK3 967 aa19.02■□□□□ 0.64
HLA-DQB1-209ENST00000487676 TDRD9Q8NDG6 1382 aaKnown RBP19.01■□□□□ 0.63
HLA-DQB1-209ENST00000487676 ANKRD30BQ9BXX2 1392 aa19.01■□□□□ 0.63
HLA-DQB1-209ENST00000487676 PTPN23Q9H3S7 1636 aa19■□□□□ 0.63
HLA-DQB1-209ENST00000487676 PDZRN3Q9UPQ7 1066 aa19■□□□□ 0.63
HLA-DQB1-209ENST00000487676 XRCC6P12956 609 aaKnown RBP eCLIP18.99■□□□□ 0.63
HLA-DQB1-209ENST00000487676 CCDC144AA2RUR9 1427 aa18.99■□□□□ 0.63
HLA-DQB1-209ENST00000487676 PCF11O94913 1555 aaKnown RBP18.98■□□□□ 0.63
HLA-DQB1-209ENST00000487676 U2AF1L5P0DN76 240 aaPredicted RBP18.98■□□□□ 0.63
HLA-DQB1-209ENST00000487676 U2AF1Q01081 240 aaKnown RBP eCLIP18.98■□□□□ 0.63
HLA-DQB1-209ENST00000487676 ZSCAN30Q86W11 494 aa18.98■□□□□ 0.63
HLA-DQB1-209ENST00000487676 RRAGDQ9NQL2 400 aaPredicted RBP18.98■□□□□ 0.63
HLA-DQB1-209ENST00000487676 C8orf34Q49A92 452 aa18.97■□□□□ 0.63
HLA-DQB1-209ENST00000487676 CHMP7Q8WUX9 453 aaPredicted RBP18.97■□□□□ 0.63
HLA-DQB1-209ENST00000487676 BCAR3O75815 825 aa18.97■□□□□ 0.63
HLA-DQB1-209ENST00000487676 PHF14O94880 888 aa18.97■□□□□ 0.63
HLA-DQB1-209ENST00000487676 MCCP23508 829 aa18.97■□□□□ 0.63
HLA-DQB1-209ENST00000487676 ST18O60284 1047 aa18.96■□□□□ 0.63
HLA-DQB1-209ENST00000487676 NUCB2P80303 420 aa18.96■□□□□ 0.63
HLA-DQB1-209ENST00000487676 RRP7AQ9Y3A4 280 aaKnown RBP18.96■□□□□ 0.63
HLA-DQB1-209ENST00000487676 EHBP1L1Q8N3D4 1523 aa18.96■□□□□ 0.63
HLA-DQB1-209ENST00000487676 NINLQ9Y2I6 1382 aa18.95■□□□□ 0.62
HLA-DQB1-209ENST00000487676 PLEKHH2Q8IVE3 1493 aa18.95■□□□□ 0.62
HLA-DQB1-209ENST00000487676 CIZ1Q9ULV3 898 aaPredicted RBP18.95■□□□□ 0.62
HLA-DQB1-209ENST00000487676 TBC1D2Q9BYX2 928 aa18.95■□□□□ 0.62
HLA-DQB1-209ENST00000487676 AMER1Q5JTC6 1135 aaPredicted RBP18.94■□□□□ 0.62
HLA-DQB1-209ENST00000487676 DZIP1LQ8IYY4 767 aaKnown RBP18.94■□□□□ 0.62
HLA-DQB1-209ENST00000487676 DDX19BQ9UMR2 479 aa18.94■□□□□ 0.62
HLA-DQB1-209ENST00000487676 KIAA1107Q9UPP5 1409 aa18.94■□□□□ 0.62
HLA-DQB1-209ENST00000487676 AQRO60306 1485 aaKnown RBP eCLIP18.94■□□□□ 0.62
HLA-DQB1-209ENST00000487676 RPRD2Q5VT52 1461 aaKnown RBP18.94■□□□□ 0.62
HLA-DQB1-209ENST00000487676 ZNF644Q9H582 1327 aaPredicted RBP18.94■□□□□ 0.62
HLA-DQB1-209ENST00000487676 PPP2R1AP30153 589 aa18.94■□□□□ 0.62
HLA-DQB1-209ENST00000487676 CCDC39Q9UFE4 941 aa18.93■□□□□ 0.62
HLA-DQB1-209ENST00000487676 SLFN5Q08AF3 891 aa18.91■□□□□ 0.62
HLA-DQB1-209ENST00000487676 DRC7Q8IY82 874 aa18.91■□□□□ 0.62
HLA-DQB1-209ENST00000487676 MCTP1Q6DN14 999 aa18.91■□□□□ 0.62
HLA-DQB1-209ENST00000487676 PANK2Q9BZ23 570 aa18.9■□□□□ 0.62
HLA-DQB1-209ENST00000487676 GOLGA6L6A8MZA4 724 aa18.9■□□□□ 0.62
HLA-DQB1-209ENST00000487676 ANKRD45Q5TZF3 282 aa18.89■□□□□ 0.62
HLA-DQB1-209ENST00000487676 UQCRHLA0A096LP55 91 aa18.89■□□□□ 0.61
HLA-DQB1-209ENST00000487676 UQCRHP07919 91 aa18.89■□□□□ 0.61
HLA-DQB1-209ENST00000487676 PTPRKQ15262 1439 aa18.88■□□□□ 0.61
HLA-DQB1-209ENST00000487676 SUPT6HQ7KZ85 1726 aaKnown RBP18.88■□□□□ 0.61
HLA-DQB1-209ENST00000487676 CAVIN1Q6NZI2 390 aaKnown RBP18.87■□□□□ 0.61
HLA-DQB1-209ENST00000487676 ZNF771Q7L3S4 317 aaPredicted RBP18.87■□□□□ 0.61
HLA-DQB1-209ENST00000487676 DUSP27Q5VZP5 1158 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms