RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 FAM135AQ9P2D6 1515 aa36.96■■■■□ 3.51
PLOD3-215ENST00000487563 PTPRTO14522 1441 aa36.95■■■■□ 3.51
PLOD3-215ENST00000487563 ZNF142P52746 1687 aaPredicted RBP36.95■■■■□ 3.51
PLOD3-215ENST00000487563 CEP170BQ9Y4F5 1589 aaPredicted RBP36.93■■■■□ 3.5
PLOD3-215ENST00000487563 WASHC2CQ9Y4E1 1318 aa36.92■■■■□ 3.5
PLOD3-215ENST00000487563 PTPN23Q9H3S7 1636 aa36.87■■■■□ 3.49
PLOD3-215ENST00000487563 PZPP20742 1482 aa36.85■■■■□ 3.49
PLOD3-215ENST00000487563 RNF17Q9BXT8 1623 aaKnown RBP36.83■■■■□ 3.49
PLOD3-215ENST00000487563 EIF2AK4Q9P2K8 1649 aaKnown RBP36.83■■■■□ 3.49
PLOD3-215ENST00000487563 TNRQ92752 1358 aa36.82■■■■□ 3.49
PLOD3-215ENST00000487563 PLA2R1Q13018 1463 aa36.82■■■■□ 3.48
PLOD3-215ENST00000487563 A2ML1A8K2U0 1454 aa36.81■■■■□ 3.48
PLOD3-215ENST00000487563 FGD6Q6ZV73 1430 aa36.8■■■■□ 3.48
PLOD3-215ENST00000487563 FBXO31Q5XUX0 539 aaPredicted RBP36.8■■■■□ 3.48
PLOD3-215ENST00000487563 NCKAP5LQ9HCH0 1330 aa36.8■■■■□ 3.48
PLOD3-215ENST00000487563 CROCC2H7BZ55 1655 aa36.8■■■■□ 3.48
PLOD3-215ENST00000487563 SHANK2Q9UPX8 1470 aa36.79■■■■□ 3.48
PLOD3-215ENST00000487563 DUOX2Q9NRD8 1548 aa36.79■■■■□ 3.48
PLOD3-215ENST00000487563 ABCC5O15440 1437 aa36.76■■■■□ 3.48
PLOD3-215ENST00000487563 ZC3H13Q5T200 1668 aaKnown RBP36.76■■■■□ 3.47
PLOD3-215ENST00000487563 PKD2Q13563 968 aa36.75■■■■□ 3.47
PLOD3-215ENST00000487563 KIF15Q9NS87 1388 aa36.74■■■■□ 3.47
PLOD3-215ENST00000487563 TCOF1Q13428 1488 aaKnown RBP36.74■■■■□ 3.47
PLOD3-215ENST00000487563 ABCC3O15438 1527 aa36.74■■■■□ 3.47
PLOD3-215ENST00000487563 DNMT1P26358 1616 aaKnown RBP36.74■■■■□ 3.47
PLOD3-215ENST00000487563 DAPK1P53355 1430 aa36.73■■■■□ 3.47
PLOD3-215ENST00000487563 MROH1Q8NDA8 1641 aa36.68■■■■□ 3.46
PLOD3-215ENST00000487563 RRP7BPQ9NSQ0 103 aa36.68■■■■□ 3.46
PLOD3-215ENST00000487563 LTBP4Q8N2S1 1624 aa36.67■■■■□ 3.46
PLOD3-215ENST00000487563 ERBINQ96RT1 1412 aa36.66■■■■□ 3.46
PLOD3-215ENST00000487563 NLRP1Q9C000 1473 aa36.65■■■■□ 3.46
PLOD3-215ENST00000487563 CEP152O94986 1710 aa36.64■■■■□ 3.46
PLOD3-215ENST00000487563 CHIC2Q9UKJ5 165 aa36.6■■■■□ 3.45
PLOD3-215ENST00000487563 ANKRD30AQ9BXX3 1397 aa36.6■■■■□ 3.45
PLOD3-215ENST00000487563 PRDM15P57071 1507 aaPredicted RBP36.59■■■■□ 3.45
PLOD3-215ENST00000487563 SPATA31D1Q6ZQQ2 1576 aa36.58■■■■□ 3.45
PLOD3-215ENST00000487563 UGGT1Q9NYU2 1555 aa36.58■■■■□ 3.45
PLOD3-215ENST00000487563 POLR1AO95602 1720 aaPredicted RBP36.58■■■■□ 3.45
PLOD3-215ENST00000487563 ZNF335Q9H4Z2 1342 aaPredicted RBP36.58■■■■□ 3.45
PLOD3-215ENST00000487563 ERVK-7P63135 1459 aa36.57■■■■□ 3.45
PLOD3-215ENST00000487563 FAM50AQ14320 339 aaKnown RBP36.57■■■■□ 3.44
PLOD3-215ENST00000487563 THEMISQ8N1K5 641 aaPredicted RBP36.56■■■■□ 3.44
PLOD3-215ENST00000487563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.54■■■■□ 3.44
PLOD3-215ENST00000487563 IQSEC2Q5JU85 1478 aa36.54■■■■□ 3.44
PLOD3-215ENST00000487563 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.53■■■■□ 3.44
PLOD3-215ENST00000487563 KANK1Q14678 1352 aa36.52■■■■□ 3.44
PLOD3-215ENST00000487563 DEPDC5O75140 1603 aa36.5■■■■□ 3.43
PLOD3-215ENST00000487563 ANKLE2Q86XL3 938 aa36.5■■■■□ 3.43
PLOD3-215ENST00000487563 NEURL4Q96JN8 1562 aa36.49■■■■□ 3.43
PLOD3-215ENST00000487563 CFAP65Q6ZU64 1925 aaKnown RBP36.46■■■■□ 3.43
PLOD3-215ENST00000487563 ADGRL2O95490 1459 aa36.44■■■■□ 3.42
PLOD3-215ENST00000487563 ARHGAP31Q2M1Z3 1444 aa36.44■■■■□ 3.42
PLOD3-215ENST00000487563 NPHP4O75161 1426 aaPredicted RBP36.39■■■■□ 3.42
PLOD3-215ENST00000487563 UBR1Q8IWV7 1749 aa36.35■■■■□ 3.41
PLOD3-215ENST00000487563 MED14O60244 1454 aa36.35■■■■□ 3.41
PLOD3-215ENST00000487563 LMTK2Q8IWU2 1503 aa36.34■■■■□ 3.41
PLOD3-215ENST00000487563 VWDEQ8N2E2 1590 aa36.32■■■■□ 3.41
PLOD3-215ENST00000487563 IQGAP1P46940 1657 aa36.32■■■■□ 3.4
PLOD3-215ENST00000487563 ANKRD50Q9ULJ7 1429 aa36.31■■■■□ 3.4
PLOD3-215ENST00000487563 CPS1P31327 1500 aa36.3■■■■□ 3.4
PLOD3-215ENST00000487563 UBAP1LF5GYI3 381 aa36.3■■■■□ 3.4
PLOD3-215ENST00000487563 EFCAB6Q5THR3 1501 aa36.26■■■■□ 3.4
PLOD3-215ENST00000487563 PIK3C2BO00750 1634 aa36.24■■■■□ 3.39
PLOD3-215ENST00000487563 STAG3Q9UJ98 1225 aa36.24■■■■□ 3.39
PLOD3-215ENST00000487563 SCAF11Q99590 1463 aaKnown RBP36.24■■■■□ 3.39
PLOD3-215ENST00000487563 PPARGC1BQ86YN6 1023 aaKnown RBP36.23■■■■□ 3.39
PLOD3-215ENST00000487563 SLIT1O75093 1534 aa36.2■■■■□ 3.39
PLOD3-215ENST00000487563 ARHGAP23Q9P227 1491 aa36.19■■■■□ 3.38
PLOD3-215ENST00000487563 TXNDC2Q86VQ3 553 aa36.18■■■■□ 3.38
PLOD3-215ENST00000487563 EID1Q9Y6B2 187 aa36.17■■■■□ 3.38
PLOD3-215ENST00000487563 SYNMO15061 1565 aa36.17■■■■□ 3.38
PLOD3-215ENST00000487563 ROCK1Q13464 1354 aa36.15■■■■□ 3.38
PLOD3-215ENST00000487563 ITGAEP38570 1179 aa36.15■■■■□ 3.38
PLOD3-215ENST00000487563 NOS1P29475 1434 aa36.15■■■■□ 3.38
PLOD3-215ENST00000487563 LTKP29376 864 aa36.13■■■■□ 3.37
PLOD3-215ENST00000487563 IDI1Q13907 227 aa36.13■■■■□ 3.37
PLOD3-215ENST00000487563 KDM5AP29375 1690 aaKnown RBP36.13■■■■□ 3.37
PLOD3-215ENST00000487563 TMEM2Q9UHN6 1383 aa36.12■■■■□ 3.37
PLOD3-215ENST00000487563 RPRD2Q5VT52 1461 aaKnown RBP36.11■■■■□ 3.37
PLOD3-215ENST00000487563 UNC13BO14795 1591 aa36.11■■■■□ 3.37
PLOD3-215ENST00000487563 TET3O43151 1660 aa36.11■■■■□ 3.37
PLOD3-215ENST00000487563 SCAF1Q9H7N4 1312 aaKnown RBP36.09■■■■□ 3.37
PLOD3-215ENST00000487563 TOM1O60784 492 aa36.07■■■■□ 3.36
PLOD3-215ENST00000487563 ADGRB3O60242 1522 aa36.07■■■■□ 3.36
PLOD3-215ENST00000487563 SLC52A1Q9NWF4 448 aa36.06■■■■□ 3.36
PLOD3-215ENST00000487563 GCC2Q8IWJ2 1684 aa36.05■■■■□ 3.36
PLOD3-215ENST00000487563 STRCP1A6NGW2 1772 aa36.04■■■■□ 3.36
PLOD3-215ENST00000487563 DISP3Q9P2K9 1392 aa36.03■■■■□ 3.36
PLOD3-215ENST00000487563 PIP4K2BP78356 416 aa36.03■■■■□ 3.36
PLOD3-215ENST00000487563 LRRC7Q96NW7 1537 aa36■■■■□ 3.35
PLOD3-215ENST00000487563 IQGAP3Q86VI3 1631 aa35.97■■■■□ 3.35
PLOD3-215ENST00000487563 NUP155O75694 1391 aa35.93■■■■□ 3.34
PLOD3-215ENST00000487563 E9PCH4 1651 aa35.93■■■■□ 3.34
PLOD3-215ENST00000487563 BCANQ96GW7 911 aa35.89■■■■□ 3.34
PLOD3-215ENST00000487563 RRBP1Q9P2E9 1410 aaKnown RBP35.89■■■■□ 3.34
PLOD3-215ENST00000487563 MYO5BQ9ULV0 1848 aa35.86■■■■□ 3.33
PLOD3-215ENST00000487563 CHGAP10645 457 aaKnown RBP35.86■■■■□ 3.33
PLOD3-215ENST00000487563 HSPA1LP34931 641 aa35.86■■■■□ 3.33
PLOD3-215ENST00000487563 SLC26A8Q96RN1 970 aa35.86■■■■□ 3.33
PLOD3-215ENST00000487563 TMEM131LA2VDJ0 1609 aa35.85■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms