RNA–Protein interactions for RNA: ENST00000487507.1

SGIP1-212, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-212ENST00000487507 ANKLE2Q86XL3 938 aa20.71■□□□□ 0.91
SGIP1-212ENST00000487507 NPHP4O75161 1426 aaPredicted RBP20.7■□□□□ 0.9
SGIP1-212ENST00000487507 ARHGAP35Q9NRY4 1499 aa20.7■□□□□ 0.9
SGIP1-212ENST00000487507 FBXO31Q5XUX0 539 aaPredicted RBP20.7■□□□□ 0.9
SGIP1-212ENST00000487507 SYNMO15061 1565 aa20.7■□□□□ 0.9
SGIP1-212ENST00000487507 TNRQ92752 1358 aa20.7■□□□□ 0.9
SGIP1-212ENST00000487507 XIRP1Q702N8 1843 aaKnown RBP20.69■□□□□ 0.9
SGIP1-212ENST00000487507 DEPDC5O75140 1603 aa20.67■□□□□ 0.9
SGIP1-212ENST00000487507 EEA1Q15075 1411 aa20.64■□□□□ 0.89
SGIP1-212ENST00000487507 UGGT1Q9NYU2 1555 aa20.63■□□□□ 0.89
SGIP1-212ENST00000487507 UBTFP17480 764 aaKnown RBP20.63■□□□□ 0.89
SGIP1-212ENST00000487507 MED14O60244 1454 aa20.62■□□□□ 0.89
SGIP1-212ENST00000487507 THEMISQ8N1K5 641 aaPredicted RBP20.61■□□□□ 0.89
SGIP1-212ENST00000487507 FAM135AQ9P2D6 1515 aa20.6■□□□□ 0.89
SGIP1-212ENST00000487507 ZC3H13Q5T200 1668 aaKnown RBP20.58■□□□□ 0.89
SGIP1-212ENST00000487507 CFAP65Q6ZU64 1925 aaKnown RBP20.58■□□□□ 0.88
SGIP1-212ENST00000487507 PZPP20742 1482 aa20.57■□□□□ 0.88
SGIP1-212ENST00000487507 CCDC18Q5T9S5 1454 aa20.57■□□□□ 0.88
SGIP1-212ENST00000487507 GPATCH8Q9UKJ3 1502 aaKnown RBP20.57■□□□□ 0.88
SGIP1-212ENST00000487507 KDM5DQ9BY66 1539 aa20.55■□□□□ 0.88
SGIP1-212ENST00000487507 ROBO1Q9Y6N7 1651 aa20.54■□□□□ 0.88
SGIP1-212ENST00000487507 CHIC1Q5VXU3 224 aa20.54■□□□□ 0.88
SGIP1-212ENST00000487507 NLRP1Q9C000 1473 aa20.53■□□□□ 0.88
SGIP1-212ENST00000487507 MIA2Q96PC5 1412 aa20.52■□□□□ 0.87
SGIP1-212ENST00000487507 PLEKHH2Q8IVE3 1493 aa20.51■□□□□ 0.87
SGIP1-212ENST00000487507 UPF1Q92900 1129 aaKnown RBP eCLIP20.51■□□□□ 0.87
SGIP1-212ENST00000487507 KIF3BO15066 747 aa20.5■□□□□ 0.87
SGIP1-212ENST00000487507 CFDP1Q9UEE9 299 aaPredicted RBP20.5■□□□□ 0.87
SGIP1-212ENST00000487507 KIAA1107Q9UPP5 1409 aa20.5■□□□□ 0.87
SGIP1-212ENST00000487507 WASHC2CQ9Y4E1 1318 aa20.49■□□□□ 0.87
SGIP1-212ENST00000487507 PHLPP1O60346 1717 aa20.48■□□□□ 0.87
SGIP1-212ENST00000487507 TRIM52Q96A61 297 aa20.48■□□□□ 0.87
SGIP1-212ENST00000487507 CASKIN1Q8WXD9 1431 aa20.47■□□□□ 0.87
SGIP1-212ENST00000487507 UBR1Q8IWV7 1749 aa20.46■□□□□ 0.87
SGIP1-212ENST00000487507 FAM135BQ49AJ0 1406 aa20.45■□□□□ 0.86
SGIP1-212ENST00000487507 ZNF644Q9H582 1327 aaPredicted RBP20.44■□□□□ 0.86
SGIP1-212ENST00000487507 DHX29Q7Z478 1369 aaKnown RBP20.44■□□□□ 0.86
SGIP1-212ENST00000487507 CCNB3Q8WWL7 1395 aa20.44■□□□□ 0.86
SGIP1-212ENST00000487507 SCAF11Q99590 1463 aaKnown RBP20.39■□□□□ 0.85
SGIP1-212ENST00000487507 RBM33Q96EV2 1170 aaKnown RBP20.39■□□□□ 0.85
SGIP1-212ENST00000487507 CEP152O94986 1710 aa20.37■□□□□ 0.85
SGIP1-212ENST00000487507 FYCO1Q9BQS8 1478 aa20.36■□□□□ 0.85
SGIP1-212ENST00000487507 RTEL1-TNFRSF6BF6WH68 1400 aa20.36■□□□□ 0.85
SGIP1-212ENST00000487507 TIAM1Q13009 1591 aa20.35■□□□□ 0.85
SGIP1-212ENST00000487507 MEX3CQ5U5Q3 659 aaKnown RBP20.35■□□□□ 0.85
SGIP1-212ENST00000487507 MBD5Q9P267 1494 aa20.35■□□□□ 0.85
SGIP1-212ENST00000487507 TMEM94Q12767 1356 aa20.34■□□□□ 0.85
SGIP1-212ENST00000487507 LTKP29376 864 aa20.34■□□□□ 0.85
SGIP1-212ENST00000487507 TXNDC2Q86VQ3 553 aa20.33■□□□□ 0.85
SGIP1-212ENST00000487507 ERVK-7P63135 1459 aa20.32■□□□□ 0.84
SGIP1-212ENST00000487507 LRP6O75581 1613 aa20.32■□□□□ 0.84
SGIP1-212ENST00000487507 JCADQ9P266 1359 aa20.32■□□□□ 0.84
SGIP1-212ENST00000487507 MAP3K1Q13233 1512 aa20.32■□□□□ 0.84
SGIP1-212ENST00000487507 ABCC3O15438 1527 aa20.3■□□□□ 0.84
SGIP1-212ENST00000487507 NCOA2Q15596 1464 aa20.3■□□□□ 0.84
SGIP1-212ENST00000487507 LRRC9Q6ZRR7 1453 aa20.3■□□□□ 0.84
SGIP1-212ENST00000487507 COL16A1Q07092 1604 aaPredicted RBP20.29■□□□□ 0.84
SGIP1-212ENST00000487507 SRCAPQ6ZRS2 3230 aa20.29■□□□□ 0.84
SGIP1-212ENST00000487507 PROSER2Q86WR7 435 aaPredicted RBP20.28■□□□□ 0.84
SGIP1-212ENST00000487507 MTUS2Q5JR59 1369 aa20.27■□□□□ 0.84
SGIP1-212ENST00000487507 ZNF772Q68DY9 489 aaPredicted RBP20.27■□□□□ 0.84
SGIP1-212ENST00000487507 CCDC141Q6ZP82 1450 aa20.26■□□□□ 0.83
SGIP1-212ENST00000487507 SLIT1O75093 1534 aa20.26■□□□□ 0.83
SGIP1-212ENST00000487507 ARHGAP23Q9P227 1491 aa20.25■□□□□ 0.83
SGIP1-212ENST00000487507 RXRBP28702 533 aa20.25■□□□□ 0.83
SGIP1-212ENST00000487507 EID1Q9Y6B2 187 aa20.25■□□□□ 0.83
SGIP1-212ENST00000487507 PIK3C2BO00750 1634 aa20.24■□□□□ 0.83
SGIP1-212ENST00000487507 SLAIN2Q9P270 581 aa20.21■□□□□ 0.83
SGIP1-212ENST00000487507 CAMSAP2Q08AD1 1489 aa20.21■□□□□ 0.83
SGIP1-212ENST00000487507 SHPRHQ149N8 1683 aa20.21■□□□□ 0.83
SGIP1-212ENST00000487507 MSH6P52701 1360 aa20.21■□□□□ 0.83
SGIP1-212ENST00000487507 SLC26A8Q96RN1 970 aa20.2■□□□□ 0.82
SGIP1-212ENST00000487507 PRDM15P57071 1507 aaPredicted RBP20.19■□□□□ 0.82
SGIP1-212ENST00000487507 KCNA6P17658 529 aa20.19■□□□□ 0.82
SGIP1-212ENST00000487507 MROH1Q8NDA8 1641 aa20.18■□□□□ 0.82
SGIP1-212ENST00000487507 KDM5AP29375 1690 aaKnown RBP20.17■□□□□ 0.82
SGIP1-212ENST00000487507 NUTM2BA6NNL0 878 aaPredicted RBP20.17■□□□□ 0.82
SGIP1-212ENST00000487507 NUTM2EB1AL46 878 aaPredicted RBP20.17■□□□□ 0.82
SGIP1-212ENST00000487507 NUTM2AQ8IVF1 878 aaPredicted RBP20.17■□□□□ 0.82
SGIP1-212ENST00000487507 SPATA31A6Q5VVP1 1343 aa20.17■□□□□ 0.82
SGIP1-212ENST00000487507 STAG3Q9UJ98 1225 aa20.15■□□□□ 0.82
SGIP1-212ENST00000487507 EHBP1L1Q8N3D4 1523 aa20.15■□□□□ 0.82
SGIP1-212ENST00000487507 NWD1Q149M9 1564 aa20.15■□□□□ 0.82
SGIP1-212ENST00000487507 EIF2AK4Q9P2K8 1649 aaKnown RBP20.15■□□□□ 0.82
SGIP1-212ENST00000487507 CDK12Q9NYV4 1490 aaPredicted RBP20.14■□□□□ 0.81
SGIP1-212ENST00000487507 NKTRP30414 1462 aaKnown RBP20.13■□□□□ 0.81
SGIP1-212ENST00000487507 TMEM2Q9UHN6 1383 aa20.13■□□□□ 0.81
SGIP1-212ENST00000487507 NUTM2DQ5VT03 806 aaPredicted RBP20.12■□□□□ 0.81
SGIP1-212ENST00000487507 BCANQ96GW7 911 aa20.12■□□□□ 0.81
SGIP1-212ENST00000487507 TET3O43151 1660 aa20.12■□□□□ 0.81
SGIP1-212ENST00000487507 RGS12O14924 1447 aa20.11■□□□□ 0.81
SGIP1-212ENST00000487507 FGD6Q6ZV73 1430 aa20.11■□□□□ 0.81
SGIP1-212ENST00000487507 CHD2O14647 1828 aaKnown RBP20.11■□□□□ 0.81
SGIP1-212ENST00000487507 SETBP1Q9Y6X0 1596 aa20.11■□□□□ 0.81
SGIP1-212ENST00000487507 ARHGEF5Q12774 1597 aa20.1■□□□□ 0.81
SGIP1-212ENST00000487507 AFF2P51816 1311 aa20.09■□□□□ 0.81
SGIP1-212ENST00000487507 EFCAB6Q5THR3 1501 aa20.09■□□□□ 0.81
SGIP1-212ENST00000487507 TSPY4P0CV99 314 aa20.09■□□□□ 0.81
SGIP1-212ENST00000487507 TSPY10P0CW01 314 aa20.09■□□□□ 0.81
SGIP1-212ENST00000487507 AHDC1Q5TGY3 1603 aaPredicted RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms