RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 MYO3AQ8NEV4 1616 aa19.22■□□□□ 0.67
VPS16-208ENST00000487461 MYOM3Q5VTT5 1437 aa19.21■□□□□ 0.67
VPS16-208ENST00000487461 MIA2Q96PC5 1412 aa19.21■□□□□ 0.67
VPS16-208ENST00000487461 CEP170BQ9Y4F5 1589 aaPredicted RBP19.21■□□□□ 0.67
VPS16-208ENST00000487461 TNRQ92752 1358 aa19.2■□□□□ 0.66
VPS16-208ENST00000487461 PLA2R1Q13018 1463 aa19.2■□□□□ 0.66
VPS16-208ENST00000487461 A2ML1A8K2U0 1454 aa19.19■□□□□ 0.66
VPS16-208ENST00000487461 ZNF142P52746 1687 aaPredicted RBP19.19■□□□□ 0.66
VPS16-208ENST00000487461 KDM5DQ9BY66 1539 aa19.19■□□□□ 0.66
VPS16-208ENST00000487461 ZNF335Q9H4Z2 1342 aaPredicted RBP19.19■□□□□ 0.66
VPS16-208ENST00000487461 PZPP20742 1482 aa19.18■□□□□ 0.66
VPS16-208ENST00000487461 TCOF1Q13428 1488 aaKnown RBP19.18■□□□□ 0.66
VPS16-208ENST00000487461 APLP2Q06481 763 aa19.18■□□□□ 0.66
VPS16-208ENST00000487461 FAM135AQ9P2D6 1515 aa19.15■□□□□ 0.66
VPS16-208ENST00000487461 MAST1Q9Y2H9 1570 aa19.15■□□□□ 0.66
VPS16-208ENST00000487461 DNMT1P26358 1616 aaKnown RBP19.14■□□□□ 0.66
VPS16-208ENST00000487461 THEMISQ8N1K5 641 aaPredicted RBP19.12■□□□□ 0.65
VPS16-208ENST00000487461 IQSEC2Q5JU85 1478 aa19.11■□□□□ 0.65
VPS16-208ENST00000487461 ABCC5O15440 1437 aa19.11■□□□□ 0.65
VPS16-208ENST00000487461 RRP7BPQ9NSQ0 103 aa19.11■□□□□ 0.65
VPS16-208ENST00000487461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.1■□□□□ 0.65
VPS16-208ENST00000487461 ILDR2Q71H61 639 aa19.1■□□□□ 0.65
VPS16-208ENST00000487461 ANKLE2Q86XL3 938 aa19.1■□□□□ 0.65
VPS16-208ENST00000487461 RNF17Q9BXT8 1623 aaKnown RBP19.09■□□□□ 0.65
VPS16-208ENST00000487461 ABCC3O15438 1527 aa19.09■□□□□ 0.65
VPS16-208ENST00000487461 NLRP1Q9C000 1473 aa19.08■□□□□ 0.64
VPS16-208ENST00000487461 DUOX2Q9NRD8 1548 aa19.07■□□□□ 0.64
VPS16-208ENST00000487461 SOCS7O14512 581 aa19.07■□□□□ 0.64
VPS16-208ENST00000487461 KIF15Q9NS87 1388 aa19.06■□□□□ 0.64
VPS16-208ENST00000487461 DISP3Q9P2K9 1392 aa19.06■□□□□ 0.64
VPS16-208ENST00000487461 MROH1Q8NDA8 1641 aa19.05■□□□□ 0.64
VPS16-208ENST00000487461 PTPN23Q9H3S7 1636 aa19.05■□□□□ 0.64
VPS16-208ENST00000487461 EIF2AK4Q9P2K8 1649 aaKnown RBP19.05■□□□□ 0.64
VPS16-208ENST00000487461 UBAP1LF5GYI3 381 aa19.05■□□□□ 0.64
VPS16-208ENST00000487461 FGD6Q6ZV73 1430 aa19.05■□□□□ 0.64
VPS16-208ENST00000487461 DAPK1P53355 1430 aa19.04■□□□□ 0.64
VPS16-208ENST00000487461 UGGT1Q9NYU2 1555 aa19.04■□□□□ 0.64
VPS16-208ENST00000487461 CHIC2Q9UKJ5 165 aa19.04■□□□□ 0.64
VPS16-208ENST00000487461 SHANK2Q9UPX8 1470 aa19.03■□□□□ 0.64
VPS16-208ENST00000487461 NEURL4Q96JN8 1562 aa19.03■□□□□ 0.64
VPS16-208ENST00000487461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.03■□□□□ 0.64
VPS16-208ENST00000487461 SPATA31D1Q6ZQQ2 1576 aa19.02■□□□□ 0.64
VPS16-208ENST00000487461 ERVK-7P63135 1459 aa19.02■□□□□ 0.63
VPS16-208ENST00000487461 ZC3H13Q5T200 1668 aaKnown RBP19.01■□□□□ 0.63
VPS16-208ENST00000487461 ERBINQ96RT1 1412 aa19■□□□□ 0.63
VPS16-208ENST00000487461 NPHP4O75161 1426 aaPredicted RBP19■□□□□ 0.63
VPS16-208ENST00000487461 MED14O60244 1454 aa18.98■□□□□ 0.63
VPS16-208ENST00000487461 POLR1AO95602 1720 aaPredicted RBP18.98■□□□□ 0.63
VPS16-208ENST00000487461 CFAP65Q6ZU64 1925 aaKnown RBP18.98■□□□□ 0.63
VPS16-208ENST00000487461 CEP152O94986 1710 aa18.97■□□□□ 0.63
VPS16-208ENST00000487461 ANKRD30AQ9BXX3 1397 aa18.97■□□□□ 0.63
VPS16-208ENST00000487461 CROCC2H7BZ55 1655 aa18.97■□□□□ 0.63
VPS16-208ENST00000487461 ARHGAP31Q2M1Z3 1444 aa18.97■□□□□ 0.63
VPS16-208ENST00000487461 FAM50AQ14320 339 aaKnown RBP18.95■□□□□ 0.62
VPS16-208ENST00000487461 DEPDC5O75140 1603 aa18.95■□□□□ 0.62
VPS16-208ENST00000487461 PRDM15P57071 1507 aaPredicted RBP18.95■□□□□ 0.62
VPS16-208ENST00000487461 CPS1P31327 1500 aa18.94■□□□□ 0.62
VPS16-208ENST00000487461 KANK1Q14678 1352 aa18.93■□□□□ 0.62
VPS16-208ENST00000487461 VWDEQ8N2E2 1590 aa18.93■□□□□ 0.62
VPS16-208ENST00000487461 LTKP29376 864 aa18.93■□□□□ 0.62
VPS16-208ENST00000487461 TXNDC2Q86VQ3 553 aa18.92■□□□□ 0.62
VPS16-208ENST00000487461 TOM1O60784 492 aa18.91■□□□□ 0.62
VPS16-208ENST00000487461 PIP4K2BP78356 416 aa18.91■□□□□ 0.62
VPS16-208ENST00000487461 IDI1Q13907 227 aa18.89■□□□□ 0.61
VPS16-208ENST00000487461 UBR1Q8IWV7 1749 aa18.88■□□□□ 0.61
VPS16-208ENST00000487461 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
VPS16-208ENST00000487461 IQGAP1P46940 1657 aa18.88■□□□□ 0.61
VPS16-208ENST00000487461 ADGRL2O95490 1459 aa18.87■□□□□ 0.61
VPS16-208ENST00000487461 LMTK2Q8IWU2 1503 aa18.87■□□□□ 0.61
VPS16-208ENST00000487461 SCAF11Q99590 1463 aaKnown RBP18.87■□□□□ 0.61
VPS16-208ENST00000487461 ARHGAP23Q9P227 1491 aa18.87■□□□□ 0.61
VPS16-208ENST00000487461 STAG3Q9UJ98 1225 aa18.87■□□□□ 0.61
VPS16-208ENST00000487461 HSPA1LP34931 641 aa18.86■□□□□ 0.61
VPS16-208ENST00000487461 EID1Q9Y6B2 187 aa18.86■□□□□ 0.61
VPS16-208ENST00000487461 SLIT1O75093 1534 aa18.85■□□□□ 0.61
VPS16-208ENST00000487461 TMEM2Q9UHN6 1383 aa18.84■□□□□ 0.61
VPS16-208ENST00000487461 ANKRD50Q9ULJ7 1429 aa18.83■□□□□ 0.61
VPS16-208ENST00000487461 LRRC7Q96NW7 1537 aa18.83■□□□□ 0.6
VPS16-208ENST00000487461 STRCP1A6NGW2 1772 aa18.82■□□□□ 0.6
VPS16-208ENST00000487461 NOS1P29475 1434 aa18.82■□□□□ 0.6
VPS16-208ENST00000487461 PIK3C2BO00750 1634 aa18.82■□□□□ 0.6
VPS16-208ENST00000487461 ALKQ9UM73 1620 aa18.79■□□□□ 0.6
VPS16-208ENST00000487461 PPARGC1BQ86YN6 1023 aaKnown RBP18.79■□□□□ 0.6
VPS16-208ENST00000487461 SLC52A1Q9NWF4 448 aa18.79■□□□□ 0.6
VPS16-208ENST00000487461 SYNMO15061 1565 aa18.78■□□□□ 0.6
VPS16-208ENST00000487461 EFCAB6Q5THR3 1501 aa18.78■□□□□ 0.6
VPS16-208ENST00000487461 SLC26A8Q96RN1 970 aa18.75■□□□□ 0.59
VPS16-208ENST00000487461 ROCK1Q13464 1354 aa18.74■□□□□ 0.59
VPS16-208ENST00000487461 RPRD2Q5VT52 1461 aaKnown RBP18.73■□□□□ 0.59
VPS16-208ENST00000487461 KCNA6P17658 529 aa18.73■□□□□ 0.59
VPS16-208ENST00000487461 ITGAEP38570 1179 aa18.73■□□□□ 0.59
VPS16-208ENST00000487461 SENP3Q9H4L4 574 aaPredicted RBP18.73■□□□□ 0.59
VPS16-208ENST00000487461 KDM5AP29375 1690 aaKnown RBP18.73■□□□□ 0.59
VPS16-208ENST00000487461 TET3O43151 1660 aa18.71■□□□□ 0.59
VPS16-208ENST00000487461 ADGRB3O60242 1522 aa18.7■□□□□ 0.58
VPS16-208ENST00000487461 BCANQ96GW7 911 aa18.7■□□□□ 0.58
VPS16-208ENST00000487461 PROSER2Q86WR7 435 aaPredicted RBP18.68■□□□□ 0.58
VPS16-208ENST00000487461 RBM33Q96EV2 1170 aaKnown RBP18.68■□□□□ 0.58
VPS16-208ENST00000487461 TMEM94Q12767 1356 aa18.68■□□□□ 0.58
VPS16-208ENST00000487461 CHGAP10645 457 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms