RNA–Protein interactions for RNA: ENST00000487378.1

TRMT2A-215, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

TSL 2

Gene TRMT2A, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-215ENST00000487378 PKD2Q13563 968 aa23.38■■□□□ 1.33
TRMT2A-215ENST00000487378 FBXO31Q5XUX0 539 aaPredicted RBP23.38■■□□□ 1.33
TRMT2A-215ENST00000487378 NCKAP5LQ9HCH0 1330 aa23.37■■□□□ 1.33
TRMT2A-215ENST00000487378 MAST1Q9Y2H9 1570 aa23.37■■□□□ 1.33
TRMT2A-215ENST00000487378 PZPP20742 1482 aa23.35■■□□□ 1.33
TRMT2A-215ENST00000487378 TCOF1Q13428 1488 aaKnown RBP23.35■■□□□ 1.33
TRMT2A-215ENST00000487378 KDM5DQ9BY66 1539 aa23.34■■□□□ 1.33
TRMT2A-215ENST00000487378 APLP2Q06481 763 aa23.34■■□□□ 1.33
TRMT2A-215ENST00000487378 A2ML1A8K2U0 1454 aa23.34■■□□□ 1.33
TRMT2A-215ENST00000487378 CEP170BQ9Y4F5 1589 aaPredicted RBP23.34■■□□□ 1.33
TRMT2A-215ENST00000487378 LTBP4Q8N2S1 1624 aa23.33■■□□□ 1.33
TRMT2A-215ENST00000487378 ZNF142P52746 1687 aaPredicted RBP23.33■■□□□ 1.33
TRMT2A-215ENST00000487378 MYO3AQ8NEV4 1616 aa23.33■■□□□ 1.32
TRMT2A-215ENST00000487378 TNRQ92752 1358 aa23.32■■□□□ 1.32
TRMT2A-215ENST00000487378 ABCC5O15440 1437 aa23.28■■□□□ 1.32
TRMT2A-215ENST00000487378 DNMT1P26358 1616 aaKnown RBP23.26■■□□□ 1.31
TRMT2A-215ENST00000487378 IQSEC2Q5JU85 1478 aa23.26■■□□□ 1.31
TRMT2A-215ENST00000487378 RNF17Q9BXT8 1623 aaKnown RBP23.26■■□□□ 1.31
TRMT2A-215ENST00000487378 ZNF335Q9H4Z2 1342 aaPredicted RBP23.24■■□□□ 1.31
TRMT2A-215ENST00000487378 SHANK2Q9UPX8 1470 aa23.24■■□□□ 1.31
TRMT2A-215ENST00000487378 DUOX2Q9NRD8 1548 aa23.23■■□□□ 1.31
TRMT2A-215ENST00000487378 THEMISQ8N1K5 641 aaPredicted RBP23.23■■□□□ 1.31
TRMT2A-215ENST00000487378 FGD6Q6ZV73 1430 aa23.23■■□□□ 1.31
TRMT2A-215ENST00000487378 NLRP1Q9C000 1473 aa23.23■■□□□ 1.31
TRMT2A-215ENST00000487378 ABCC3O15438 1527 aa23.23■■□□□ 1.31
TRMT2A-215ENST00000487378 EIF2AK4Q9P2K8 1649 aaKnown RBP23.22■■□□□ 1.31
TRMT2A-215ENST00000487378 KIF15Q9NS87 1388 aa23.21■■□□□ 1.31
TRMT2A-215ENST00000487378 RRP7BPQ9NSQ0 103 aa23.2■■□□□ 1.3
TRMT2A-215ENST00000487378 MROH1Q8NDA8 1641 aa23.19■■□□□ 1.3
TRMT2A-215ENST00000487378 DAPK1P53355 1430 aa23.19■■□□□ 1.3
TRMT2A-215ENST00000487378 ANKLE2Q86XL3 938 aa23.19■■□□□ 1.3
TRMT2A-215ENST00000487378 PTPN23Q9H3S7 1636 aa23.19■■□□□ 1.3
TRMT2A-215ENST00000487378 ERBINQ96RT1 1412 aa23.17■■□□□ 1.3
TRMT2A-215ENST00000487378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.17■■□□□ 1.33e-7■■■□□ 14.6
TRMT2A-215ENST00000487378 SPATA31D1Q6ZQQ2 1576 aa23.16■■□□□ 1.3
TRMT2A-215ENST00000487378 ARHGAP31Q2M1Z3 1444 aa23.16■■□□□ 1.3
TRMT2A-215ENST00000487378 ZC3H13Q5T200 1668 aaKnown RBP23.14■■□□□ 1.29
TRMT2A-215ENST00000487378 ERVK-7P63135 1459 aa23.14■■□□□ 1.29
TRMT2A-215ENST00000487378 UGGT1Q9NYU2 1555 aa23.14■■□□□ 1.29
TRMT2A-215ENST00000487378 MED14O60244 1454 aa23.13■■□□□ 1.29
TRMT2A-215ENST00000487378 NEURL4Q96JN8 1562 aa23.12■■□□□ 1.29
TRMT2A-215ENST00000487378 ANKRD30AQ9BXX3 1397 aa23.12■■□□□ 1.29
TRMT2A-215ENST00000487378 PRDM15P57071 1507 aaPredicted RBP23.1■■□□□ 1.29
TRMT2A-215ENST00000487378 CHIC2Q9UKJ5 165 aa23.1■■□□□ 1.29
TRMT2A-215ENST00000487378 CROCC2H7BZ55 1655 aa23.09■■□□□ 1.29
TRMT2A-215ENST00000487378 DEPDC5O75140 1603 aa23.06■■□□□ 1.28
TRMT2A-215ENST00000487378 NPHP4O75161 1426 aaPredicted RBP23.06■■□□□ 1.28
TRMT2A-215ENST00000487378 ADGRL2O95490 1459 aa23.05■■□□□ 1.28
TRMT2A-215ENST00000487378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.05■■□□□ 1.28
TRMT2A-215ENST00000487378 UBAP1LF5GYI3 381 aa23.04■■□□□ 1.28
TRMT2A-215ENST00000487378 KANK1Q14678 1352 aa23.03■■□□□ 1.28
TRMT2A-215ENST00000487378 LMTK2Q8IWU2 1503 aa23.03■■□□□ 1.28
TRMT2A-215ENST00000487378 POLR1AO95602 1720 aaPredicted RBP23.02■■□□□ 1.28
TRMT2A-215ENST00000487378 CPS1P31327 1500 aa23.02■■□□□ 1.28
TRMT2A-215ENST00000487378 VWDEQ8N2E2 1590 aa23.01■■□□□ 1.27
TRMT2A-215ENST00000487378 FAM50AQ14320 339 aaKnown RBP23.01■■□□□ 1.27
TRMT2A-215ENST00000487378 CEP152O94986 1710 aa23.01■■□□□ 1.27
TRMT2A-215ENST00000487378 ARHGAP23Q9P227 1491 aa22.99■■□□□ 1.27
TRMT2A-215ENST00000487378 LTKP29376 864 aa22.99■■□□□ 1.27
TRMT2A-215ENST00000487378 IDI1Q13907 227 aa22.97■■□□□ 1.27
TRMT2A-215ENST00000487378 SLIT1O75093 1534 aa22.97■■□□□ 1.27
TRMT2A-215ENST00000487378 TXNDC2Q86VQ3 553 aa22.95■■□□□ 1.26
TRMT2A-215ENST00000487378 ANKRD50Q9ULJ7 1429 aa22.95■■□□□ 1.26
TRMT2A-215ENST00000487378 UBR1Q8IWV7 1749 aa22.94■■□□□ 1.26
TRMT2A-215ENST00000487378 NOS1P29475 1434 aa22.94■■□□□ 1.26
TRMT2A-215ENST00000487378 SCAF11Q99590 1463 aaKnown RBP22.93■■□□□ 1.26
TRMT2A-215ENST00000487378 TOM1O60784 492 aa22.93■■□□□ 1.26
TRMT2A-215ENST00000487378 TMEM2Q9UHN6 1383 aa22.92■■□□□ 1.26
TRMT2A-215ENST00000487378 IQGAP1P46940 1657 aa22.91■■□□□ 1.26
TRMT2A-215ENST00000487378 CFAP65Q6ZU64 1925 aaKnown RBP22.91■■□□□ 1.26
TRMT2A-215ENST00000487378 SLC52A1Q9NWF4 448 aa22.91■■□□□ 1.26
TRMT2A-215ENST00000487378 EID1Q9Y6B2 187 aa22.91■■□□□ 1.26
TRMT2A-215ENST00000487378 ROCK1Q13464 1354 aa22.89■■□□□ 1.26
TRMT2A-215ENST00000487378 DISP3Q9P2K9 1392 aa22.89■■□□□ 1.25
TRMT2A-215ENST00000487378 EFCAB6Q5THR3 1501 aa22.87■■□□□ 1.25
TRMT2A-215ENST00000487378 RPRD2Q5VT52 1461 aaKnown RBP22.86■■□□□ 1.25
TRMT2A-215ENST00000487378 STAG3Q9UJ98 1225 aa22.86■■□□□ 1.25
TRMT2A-215ENST00000487378 LRRC7Q96NW7 1537 aa22.86■■□□□ 1.25
TRMT2A-215ENST00000487378 SYNMO15061 1565 aa22.85■■□□□ 1.25
TRMT2A-215ENST00000487378 PIK3C2BO00750 1634 aa22.85■■□□□ 1.25
TRMT2A-215ENST00000487378 KDM5AP29375 1690 aaKnown RBP22.84■■□□□ 1.25
TRMT2A-215ENST00000487378 ILDR2Q71H61 639 aa22.83■■□□□ 1.25
TRMT2A-215ENST00000487378 HSPA1LP34931 641 aa22.82■■□□□ 1.24
TRMT2A-215ENST00000487378 PIP4K2BP78356 416 aa22.82■■□□□ 1.24
TRMT2A-215ENST00000487378 ALKQ9UM73 1620 aa22.82■■□□□ 1.24
TRMT2A-215ENST00000487378 STRCP1A6NGW2 1772 aa22.81■■□□□ 1.24
TRMT2A-215ENST00000487378 TET3O43151 1660 aa22.77■■□□□ 1.24
TRMT2A-215ENST00000487378 KCNA6P17658 529 aa22.76■■□□□ 1.23
TRMT2A-215ENST00000487378 SCAF1Q9H7N4 1312 aaKnown RBP22.76■■□□□ 1.23
TRMT2A-215ENST00000487378 PPARGC1BQ86YN6 1023 aaKnown RBP22.75■■□□□ 1.23
TRMT2A-215ENST00000487378 ADGRB3O60242 1522 aa22.75■■□□□ 1.23
TRMT2A-215ENST00000487378 UNC13BO14795 1591 aa22.75■■□□□ 1.23
TRMT2A-215ENST00000487378 SLC26A8Q96RN1 970 aa22.73■■□□□ 1.23
TRMT2A-215ENST00000487378 ZFYVE9O95405 1425 aa22.73■■□□□ 1.23
TRMT2A-215ENST00000487378 HDGFP51858 240 aaKnown RBP22.72■■□□□ 1.23
TRMT2A-215ENST00000487378 NUP155O75694 1391 aa22.71■■□□□ 1.23
TRMT2A-215ENST00000487378 ITGAEP38570 1179 aa22.7■■□□□ 1.22
TRMT2A-215ENST00000487378 PLEKHG1Q9ULL1 1385 aa22.68■■□□□ 1.22
TRMT2A-215ENST00000487378 SOCS7O14512 581 aa22.68■■□□□ 1.22
TRMT2A-215ENST00000487378 TMEM94Q12767 1356 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms