RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 DNMT1P26358 1616 aaKnown RBP35.24■■■■□ 3.23
SRM-205ENST00000487300 TCOF1Q13428 1488 aaKnown RBP35.23■■■■□ 3.23
SRM-205ENST00000487300 ZC3H13Q5T200 1668 aaKnown RBP35.22■■■■□ 3.23
SRM-205ENST00000487300 CEP170BQ9Y4F5 1589 aaPredicted RBP35.21■■■■□ 3.23
SRM-205ENST00000487300 APLP2Q06481 763 aa35.2■■■■□ 3.23
SRM-205ENST00000487300 FGD6Q6ZV73 1430 aa35.2■■■■□ 3.23
SRM-205ENST00000487300 MROH1Q8NDA8 1641 aa35.2■■■■□ 3.23
SRM-205ENST00000487300 NCOA1Q15788 1441 aa35.18■■■■□ 3.22
SRM-205ENST00000487300 KIF3BO15066 747 aa35.18■■■■□ 3.22
SRM-205ENST00000487300 CAMSAP1Q5T5Y3 1602 aa35.17■■■■□ 3.22
SRM-205ENST00000487300 PZPP20742 1482 aa35.16■■■■□ 3.22
SRM-205ENST00000487300 DUOX2Q9NRD8 1548 aa35.15■■■■□ 3.22
SRM-205ENST00000487300 ABCC5O15440 1437 aa35.14■■■■□ 3.22
SRM-205ENST00000487300 PTPRTO14522 1441 aa35.13■■■■□ 3.21
SRM-205ENST00000487300 DAPK1P53355 1430 aa35.1■■■■□ 3.21
SRM-205ENST00000487300 DMRT2Q9Y5R5 561 aa35.09■■■■□ 3.21
SRM-205ENST00000487300 ABCC3O15438 1527 aa35.09■■■■□ 3.21
SRM-205ENST00000487300 PLA2R1Q13018 1463 aa35.09■■■■□ 3.21
SRM-205ENST00000487300 FBXO41Q8TF61 875 aa35.08■■■■□ 3.21
SRM-205ENST00000487300 CEP152O94986 1710 aa35.08■■■■□ 3.21
SRM-205ENST00000487300 DEPDC5O75140 1603 aa35.06■■■■□ 3.2
SRM-205ENST00000487300 A2ML1A8K2U0 1454 aa35.05■■■■□ 3.2
SRM-205ENST00000487300 PRDM15P57071 1507 aaPredicted RBP35.05■■■■□ 3.2
SRM-205ENST00000487300 ERBINQ96RT1 1412 aa35.02■■■■□ 3.2
SRM-205ENST00000487300 WASHC2CQ9Y4E1 1318 aa35.02■■■■□ 3.2
SRM-205ENST00000487300 KIF15Q9NS87 1388 aa35.01■■■■□ 3.2
SRM-205ENST00000487300 POLR1AO95602 1720 aaPredicted RBP35■■■■□ 3.19
SRM-205ENST00000487300 SPATA31D1Q6ZQQ2 1576 aa34.99■■■■□ 3.19
SRM-205ENST00000487300 TNRQ92752 1358 aa34.98■■■■□ 3.19
SRM-205ENST00000487300 LTBP4Q8N2S1 1624 aa34.95■■■■□ 3.19
SRM-205ENST00000487300 FBXO31Q5XUX0 539 aaPredicted RBP34.94■■■■□ 3.18
SRM-205ENST00000487300 CERKQ8TCT0 537 aa34.94■■■■□ 3.18
SRM-205ENST00000487300 ADGRL2O95490 1459 aa34.94■■■■□ 3.18
SRM-205ENST00000487300 NLRP1Q9C000 1473 aa34.93■■■■□ 3.18
SRM-205ENST00000487300 NEURL4Q96JN8 1562 aa34.88■■■■□ 3.17
SRM-205ENST00000487300 ERVK-7P63135 1459 aa34.88■■■■□ 3.17
SRM-205ENST00000487300 VWDEQ8N2E2 1590 aa34.87■■■■□ 3.17
SRM-205ENST00000487300 CFAP65Q6ZU64 1925 aaKnown RBP34.86■■■■□ 3.17
SRM-205ENST00000487300 ANKRD30AQ9BXX3 1397 aa34.86■■■■□ 3.17
SRM-205ENST00000487300 PKD2Q13563 968 aa34.85■■■■□ 3.17
SRM-205ENST00000487300 RRP7BPQ9NSQ0 103 aa34.84■■■■□ 3.17
SRM-205ENST00000487300 NCKAP5LQ9HCH0 1330 aa34.83■■■■□ 3.17
SRM-205ENST00000487300 UGGT1Q9NYU2 1555 aa34.83■■■■□ 3.17
SRM-205ENST00000487300 ARHGAP31Q2M1Z3 1444 aa34.83■■■■□ 3.17
SRM-205ENST00000487300 LMTK2Q8IWU2 1503 aa34.81■■■■□ 3.16
SRM-205ENST00000487300 UBR1Q8IWV7 1749 aa34.8■■■■□ 3.16
SRM-205ENST00000487300 IQSEC2Q5JU85 1478 aa34.79■■■■□ 3.16
SRM-205ENST00000487300 CHIC2Q9UKJ5 165 aa34.73■■■■□ 3.15
SRM-205ENST00000487300 EFCAB6Q5THR3 1501 aa34.71■■■■□ 3.15
SRM-205ENST00000487300 MED14O60244 1454 aa34.7■■■■□ 3.15
SRM-205ENST00000487300 FAM50AQ14320 339 aaKnown RBP34.69■■■■□ 3.14
SRM-205ENST00000487300 KDM5AP29375 1690 aaKnown RBP34.69■■■■□ 3.14
SRM-205ENST00000487300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.68■■■■□ 3.14
SRM-205ENST00000487300 KANK1Q14678 1352 aa34.67■■■■□ 3.14
SRM-205ENST00000487300 IQGAP1P46940 1657 aa34.66■■■■□ 3.14
SRM-205ENST00000487300 UNC13BO14795 1591 aa34.66■■■■□ 3.14
SRM-205ENST00000487300 THEMISQ8N1K5 641 aaPredicted RBP34.65■■■■□ 3.14
SRM-205ENST00000487300 ANKRD50Q9ULJ7 1429 aa34.64■■■■□ 3.14
SRM-205ENST00000487300 ZNF335Q9H4Z2 1342 aaPredicted RBP34.64■■■■□ 3.14
SRM-205ENST00000487300 PIK3C2BO00750 1634 aa34.64■■■■□ 3.14
SRM-205ENST00000487300 SYNMO15061 1565 aa34.62■■■■□ 3.13
SRM-205ENST00000487300 TET3O43151 1660 aa34.61■■■■□ 3.13
SRM-205ENST00000487300 ROCK1Q13464 1354 aa34.6■■■■□ 3.13
SRM-205ENST00000487300 SLIT1O75093 1534 aa34.6■■■■□ 3.13
SRM-205ENST00000487300 GCC2Q8IWJ2 1684 aa34.6■■■■□ 3.13
SRM-205ENST00000487300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.59■■■■□ 3.13
SRM-205ENST00000487300 ARHGAP23Q9P227 1491 aa34.58■■■■□ 3.13
SRM-205ENST00000487300 ANKLE2Q86XL3 938 aa34.57■■■■□ 3.12
SRM-205ENST00000487300 NPHP4O75161 1426 aaPredicted RBP34.56■■■■□ 3.12
SRM-205ENST00000487300 NOS1P29475 1434 aa34.55■■■■□ 3.12
SRM-205ENST00000487300 RPRD2Q5VT52 1461 aaKnown RBP34.54■■■■□ 3.12
SRM-205ENST00000487300 CPS1P31327 1500 aa34.54■■■■□ 3.12
SRM-205ENST00000487300 IQGAP3Q86VI3 1631 aa34.51■■■■□ 3.11
SRM-205ENST00000487300 STRCP1A6NGW2 1772 aa34.5■■■■□ 3.11
SRM-205ENST00000487300 SCAF11Q99590 1463 aaKnown RBP34.49■■■■□ 3.11
SRM-205ENST00000487300 E9PCH4 1651 aa34.46■■■■□ 3.11
SRM-205ENST00000487300 ADGRB3O60242 1522 aa34.45■■■■□ 3.11
SRM-205ENST00000487300 RRBP1Q9P2E9 1410 aaKnown RBP34.45■■■■□ 3.11
SRM-205ENST00000487300 MYO5BQ9ULV0 1848 aa34.42■■■■□ 3.1
SRM-205ENST00000487300 PPARGC1BQ86YN6 1023 aaKnown RBP34.41■■■■□ 3.1
SRM-205ENST00000487300 TMEM2Q9UHN6 1383 aa34.38■■■■□ 3.09
SRM-205ENST00000487300 IDI1Q13907 227 aa34.36■■■■□ 3.09
SRM-205ENST00000487300 LTKP29376 864 aa34.34■■■■□ 3.09
SRM-205ENST00000487300 TMEM131LA2VDJ0 1609 aa34.33■■■■□ 3.09
SRM-205ENST00000487300 SLC52A1Q9NWF4 448 aa34.3■■■■□ 3.08
SRM-205ENST00000487300 XIRP1Q702N8 1843 aaKnown RBP34.28■■■■□ 3.08
SRM-205ENST00000487300 TXNDC2Q86VQ3 553 aa34.28■■■■□ 3.08
SRM-205ENST00000487300 ALKQ9UM73 1620 aa34.28■■■■□ 3.08
SRM-205ENST00000487300 LRRC7Q96NW7 1537 aa34.26■■■■□ 3.08
SRM-205ENST00000487300 ITGAEP38570 1179 aa34.25■■■■□ 3.07
SRM-205ENST00000487300 UBAP1LF5GYI3 381 aa34.23■■■■□ 3.07
SRM-205ENST00000487300 EID1Q9Y6B2 187 aa34.23■■■■□ 3.07
SRM-205ENST00000487300 SPHKAPQ2M3C7 1700 aa34.23■■■■□ 3.07
SRM-205ENST00000487300 ZFYVE9O95405 1425 aa34.22■■■■□ 3.07
SRM-205ENST00000487300 STAG3Q9UJ98 1225 aa34.21■■■■□ 3.07
SRM-205ENST00000487300 NUP155O75694 1391 aa34.2■■■■□ 3.07
SRM-205ENST00000487300 NAIPQ13075 1403 aa34.19■■■■□ 3.06
SRM-205ENST00000487300 NWD1Q149M9 1564 aa34.16■■■■□ 3.06
SRM-205ENST00000487300 HFM1A2PYH4 1435 aa34.1■■■■□ 3.05
SRM-205ENST00000487300 CHD2O14647 1828 aaKnown RBP34.09■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms