RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 LMOD3Q0VAK6 560 aa18.38■□□□□ 0.53
EPHB4-206ENST00000487222 PDE4AP27815 886 aa18.37■□□□□ 0.53
EPHB4-206ENST00000487222 CCDC144AA2RUR9 1427 aa18.36■□□□□ 0.53
EPHB4-206ENST00000487222 PTPRGP23470 1445 aa18.36■□□□□ 0.53
EPHB4-206ENST00000487222 PAK3O75914 559 aaPredicted RBP18.36■□□□□ 0.53
EPHB4-206ENST00000487222 FAM161AQ3B820 660 aa18.36■□□□□ 0.53
EPHB4-206ENST00000487222 PANK3Q9H999 370 aa18.35■□□□□ 0.53
EPHB4-206ENST00000487222 RRP1P56182 461 aaKnown RBP18.34■□□□□ 0.53
EPHB4-206ENST00000487222 IGF1RP08069 1367 aa18.34■□□□□ 0.53
EPHB4-206ENST00000487222 TRIM6-TRIM34B2RNG4 842 aa18.34■□□□□ 0.53
EPHB4-206ENST00000487222 GPATCH3Q96I76 525 aa18.33■□□□□ 0.53
EPHB4-206ENST00000487222 CSPP1Q1MSJ5 1256 aa18.32■□□□□ 0.52
EPHB4-206ENST00000487222 ST18O60284 1047 aa18.32■□□□□ 0.52
EPHB4-206ENST00000487222 EXOC6Q8TAG9 804 aa18.31■□□□□ 0.52
EPHB4-206ENST00000487222 E9PSI1 815 aa18.31■□□□□ 0.52
EPHB4-206ENST00000487222 DDX11L8A8MPP1 907 aa18.31■□□□□ 0.52
EPHB4-206ENST00000487222 EID1Q9Y6B2 187 aa18.31■□□□□ 0.52
EPHB4-206ENST00000487222 FANCIQ9NVI1 1328 aa18.31■□□□□ 0.52
EPHB4-206ENST00000487222 FGD5Q6ZNL6 1462 aa18.3■□□□□ 0.52
EPHB4-206ENST00000487222 CGNL1Q0VF96 1302 aa18.3■□□□□ 0.52
EPHB4-206ENST00000487222 SLC4A10Q6U841 1118 aa18.3■□□□□ 0.52
EPHB4-206ENST00000487222 USP47Q96K76 1375 aa18.3■□□□□ 0.52
EPHB4-206ENST00000487222 NUTM2DQ5VT03 806 aaPredicted RBP18.29■□□□□ 0.52
EPHB4-206ENST00000487222 TRAK1Q9UPV9 953 aa18.29■□□□□ 0.52
EPHB4-206ENST00000487222 GAPVD1Q14C86 1478 aa18.29■□□□□ 0.52
EPHB4-206ENST00000487222 FOXD4L1Q9NU39 408 aa18.28■□□□□ 0.52
EPHB4-206ENST00000487222 PLIN1O60240 522 aa18.28■□□□□ 0.52
EPHB4-206ENST00000487222 TPM4P67936 248 aa18.27■□□□□ 0.52
EPHB4-206ENST00000487222 RRP7AQ9Y3A4 280 aaKnown RBP18.27■□□□□ 0.52
EPHB4-206ENST00000487222 UACAQ9BZF9 1416 aa18.27■□□□□ 0.52
EPHB4-206ENST00000487222 CSB-PGBD3P0DP91 1061 aa18.27■□□□□ 0.51
EPHB4-206ENST00000487222 CRBNQ96SW2 442 aa18.27■□□□□ 0.51
EPHB4-206ENST00000487222 ZKSCAN2Q63HK3 967 aa18.26■□□□□ 0.51
EPHB4-206ENST00000487222 PHF14O94880 888 aa18.26■□□□□ 0.51
EPHB4-206ENST00000487222 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.26■□□□□ 0.51
EPHB4-206ENST00000487222 GSE1Q14687 1217 aa18.25■□□□□ 0.51
EPHB4-206ENST00000487222 CCDC34Q96HJ3 373 aa18.25■□□□□ 0.51
EPHB4-206ENST00000487222 GORABQ5T7V8 394 aa18.24■□□□□ 0.51
EPHB4-206ENST00000487222 NGEFQ8N5V2 710 aa18.24■□□□□ 0.51
EPHB4-206ENST00000487222 NGDNQ8NEJ9 315 aaKnown RBP18.24■□□□□ 0.51
EPHB4-206ENST00000487222 VGFO15240 615 aaPredicted RBP18.23■□□□□ 0.51
EPHB4-206ENST00000487222 MYOM3Q5VTT5 1437 aa18.23■□□□□ 0.51
EPHB4-206ENST00000487222 NOL8Q76FK4 1167 aaKnown RBP18.23■□□□□ 0.51
EPHB4-206ENST00000487222 HSP90B1P14625 803 aaKnown RBP18.22■□□□□ 0.51
EPHB4-206ENST00000487222 BCL2L13Q9BXK5 485 aa18.22■□□□□ 0.51
EPHB4-206ENST00000487222 SLC4A3P48751 1232 aa18.22■□□□□ 0.51
EPHB4-206ENST00000487222 SKOR2Q2VWA4 1001 aaPredicted RBP18.22■□□□□ 0.51
EPHB4-206ENST00000487222 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.21■□□□□ 0.51
EPHB4-206ENST00000487222 COG6Q9Y2V7 657 aa18.21■□□□□ 0.51
EPHB4-206ENST00000487222 ZNF330Q9Y3S2 320 aaPredicted RBP18.21■□□□□ 0.51
EPHB4-206ENST00000487222 RAD54L2Q9Y4B4 1467 aa18.21■□□□□ 0.51
EPHB4-206ENST00000487222 KIF16BQ96L93 1317 aa18.21■□□□□ 0.51
EPHB4-206ENST00000487222 AMPHP49418 695 aa18.21■□□□□ 0.51
EPHB4-206ENST00000487222 NCAPD3P42695 1498 aa18.21■□□□□ 0.5
EPHB4-206ENST00000487222 ANKRD45Q5TZF3 282 aa18.2■□□□□ 0.5
EPHB4-206ENST00000487222 ISY1Q9ULR0 285 aaKnown RBP18.2■□□□□ 0.5
EPHB4-206ENST00000487222 KIF3AQ9Y496 699 aa18.2■□□□□ 0.5
EPHB4-206ENST00000487222 APAF1O14727 1248 aa18.2■□□□□ 0.5
EPHB4-206ENST00000487222 ARID3AQ99856 593 aa18.2■□□□□ 0.5
EPHB4-206ENST00000487222 DDX49Q9Y6V7 483 aaKnown RBP18.19■□□□□ 0.5
EPHB4-206ENST00000487222 CHMP3Q9Y3E7 222 aa18.19■□□□□ 0.5
EPHB4-206ENST00000487222 FGD6Q6ZV73 1430 aa18.19■□□□□ 0.5
EPHB4-206ENST00000487222 TAF7LQ5H9L4 462 aa18.17■□□□□ 0.5
EPHB4-206ENST00000487222 EVC2Q86UK5 1308 aa18.17■□□□□ 0.5
EPHB4-206ENST00000487222 ELL2O00472 640 aaPredicted RBP18.16■□□□□ 0.5
EPHB4-206ENST00000487222 RSPH6AQ9H0K4 717 aa18.16■□□□□ 0.5
EPHB4-206ENST00000487222 DDX19BQ9UMR2 479 aa18.16■□□□□ 0.5
EPHB4-206ENST00000487222 ATP6V1DQ9Y5K8 247 aa18.15■□□□□ 0.5
EPHB4-206ENST00000487222 CCDC7Q96M83 1385 aa18.15■□□□□ 0.5
EPHB4-206ENST00000487222 NUTM2FA1L443 756 aa18.14■□□□□ 0.49
EPHB4-206ENST00000487222 FOXD4L5Q5VV16 416 aaPredicted RBP18.14■□□□□ 0.49
EPHB4-206ENST00000487222 FOXD4L4Q8WXT5 416 aaPredicted RBP18.14■□□□□ 0.49
EPHB4-206ENST00000487222 CUX1P39880 1505 aa18.13■□□□□ 0.49
EPHB4-206ENST00000487222 OSCARQ8IYS5 282 aa18.13■□□□□ 0.49
EPHB4-206ENST00000487222 RILPL2Q969X0 211 aa18.13■□□□□ 0.49
EPHB4-206ENST00000487222 KIF21BO75037 1637 aa18.13■□□□□ 0.49
EPHB4-206ENST00000487222 CLSTN1O94985 981 aa18.12■□□□□ 0.49
EPHB4-206ENST00000487222 COG3Q96JB2 828 aa18.12■□□□□ 0.49
EPHB4-206ENST00000487222 KIF7Q2M1P5 1343 aa18.12■□□□□ 0.49
EPHB4-206ENST00000487222 SF3A1Q15459 793 aaKnown RBP18.11■□□□□ 0.49
EPHB4-206ENST00000487222 LTV1Q96GA3 475 aaPredicted RBP18.11■□□□□ 0.49
EPHB4-206ENST00000487222 ZNF644Q9H582 1327 aaPredicted RBP18.11■□□□□ 0.49
EPHB4-206ENST00000487222 REC8O95072 547 aa18.11■□□□□ 0.49
EPHB4-206ENST00000487222 DZIP1LQ8IYY4 767 aaKnown RBP18.11■□□□□ 0.49
EPHB4-206ENST00000487222 CHMP4CQ96CF2 233 aa18.11■□□□□ 0.49
EPHB4-206ENST00000487222 HSP90AA2PQ14568 343 aaPredicted RBP18.1■□□□□ 0.49
EPHB4-206ENST00000487222 LRRC9Q6ZRR7 1453 aa18.1■□□□□ 0.49
EPHB4-206ENST00000487222 CYB5RLQ6IPT4 315 aa18.1■□□□□ 0.49
EPHB4-206ENST00000487222 STAC3Q96MF2 364 aa18.1■□□□□ 0.49
EPHB4-206ENST00000487222 CHMP5Q9NZZ3 219 aa18.1■□□□□ 0.49
EPHB4-206ENST00000487222 CNTLNQ9NXG0 1405 aa18.09■□□□□ 0.49
EPHB4-206ENST00000487222 API5Q9BZZ5 524 aaKnown RBP18.08■□□□□ 0.49
EPHB4-206ENST00000487222 CASKIN1Q8WXD9 1431 aa18.08■□□□□ 0.48
EPHB4-206ENST00000487222 AQRO60306 1485 aaKnown RBP eCLIP18.07■□□□□ 0.486e-7■■■■■ 32.2
EPHB4-206ENST00000487222 DIAPH1O60610 1272 aaKnown RBP18.07■□□□□ 0.48
EPHB4-206ENST00000487222 AAMPQ13685 434 aa18.07■□□□□ 0.48
EPHB4-206ENST00000487222 H3BQV1 296 aa18.07■□□□□ 0.48
EPHB4-206ENST00000487222 IFFO2Q5TF58 517 aa18.07■□□□□ 0.48
EPHB4-206ENST00000487222 MINK1Q8N4C8 1332 aaPredicted RBP18.07■□□□□ 0.48
EPHB4-206ENST00000487222 RASSF8Q8NHQ8 419 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms