RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 MAP2K5Q13163 448 aa11.23□□□□□ -0.61
RTFDC1-209ENST00000487211 PCDHGA10Q9Y5H3 936 aa11.23□□□□□ -0.61
RTFDC1-209ENST00000487211 MINK1Q8N4C8 1332 aaPredicted RBP11.23□□□□□ -0.61
RTFDC1-209ENST00000487211 BAZ1AQ9NRL2 1556 aaPredicted RBP11.23□□□□□ -0.61
RTFDC1-209ENST00000487211 RIMBP2O15034 1052 aa11.22□□□□□ -0.61
RTFDC1-209ENST00000487211 HOXB3P14651 431 aaPredicted RBP11.22□□□□□ -0.61
RTFDC1-209ENST00000487211 SMARCA4P51532 1647 aa11.22□□□□□ -0.61
RTFDC1-209ENST00000487211 PTGDRQ13258 359 aa11.22□□□□□ -0.61
RTFDC1-209ENST00000487211 TYW1BQ6NUM6 668 aa11.22□□□□□ -0.61
RTFDC1-209ENST00000487211 KDM4FA0A1W2PPD8 638 aa11.21□□□□□ -0.61
RTFDC1-209ENST00000487211 NUDT7P0C024 238 aa11.21□□□□□ -0.61
RTFDC1-209ENST00000487211 ARSIQ5FYB1 569 aa11.21□□□□□ -0.61
RTFDC1-209ENST00000487211 KHSRPQ92945 711 aaKnown RBP eCLIP11.21□□□□□ -0.61
RTFDC1-209ENST00000487211 JPH4Q96JJ6 628 aa11.21□□□□□ -0.61
RTFDC1-209ENST00000487211 ATAD2BQ9ULI0 1458 aa11.2□□□□□ -0.62
RTFDC1-209ENST00000487211 FECHP22830 423 aa11.2□□□□□ -0.62
RTFDC1-209ENST00000487211 CDHR5Q9HBB8 845 aa11.2□□□□□ -0.62
RTFDC1-209ENST00000487211 GPBP1L1Q9HC44 474 aaPredicted RBP11.2□□□□□ -0.62
RTFDC1-209ENST00000487211 NCAPD3P42695 1498 aa11.19□□□□□ -0.62
RTFDC1-209ENST00000487211 IRF6O14896 467 aa11.19□□□□□ -0.62
RTFDC1-209ENST00000487211 PDE4DQ08499 809 aa11.19□□□□□ -0.62
RTFDC1-209ENST00000487211 ZNF710Q8N1W2 664 aa11.19□□□□□ -0.62
RTFDC1-209ENST00000487211 CCDC102AQ96A19 550 aa11.19□□□□□ -0.62
RTFDC1-209ENST00000487211 ZNF454Q8N9F8 522 aa11.18□□□□□ -0.62
RTFDC1-209ENST00000487211 FBXW7Q969H0 707 aa11.18□□□□□ -0.62
RTFDC1-209ENST00000487211 ZSWIM6Q9HCJ5 1215 aa11.18□□□□□ -0.62
RTFDC1-209ENST00000487211 FOSBP53539 338 aa11.17□□□□□ -0.62
RTFDC1-209ENST00000487211 TSR1Q2NL82 804 aaKnown RBP11.17□□□□□ -0.62
RTFDC1-209ENST00000487211 RSF1Q96T23 1441 aaPredicted RBP11.17□□□□□ -0.62
RTFDC1-209ENST00000487211 SOCS7O14512 581 aa11.16□□□□□ -0.62
RTFDC1-209ENST00000487211 GPR153Q6NV75 609 aa11.16□□□□□ -0.62
RTFDC1-209ENST00000487211 NPDC1Q9NQX5 325 aaPredicted RBP11.16□□□□□ -0.62
RTFDC1-209ENST00000487211 GTF3C3Q9Y5Q9 886 aa11.16□□□□□ -0.62
RTFDC1-209ENST00000487211 NESP48681 1621 aa11.16□□□□□ -0.62
RTFDC1-209ENST00000487211 LMTK3Q96Q04 1460 aa11.15□□□□□ -0.62
RTFDC1-209ENST00000487211 ARHGEF11O15085 1522 aa11.14□□□□□ -0.63
RTFDC1-209ENST00000487211 ILDR2Q71H61 639 aa11.14□□□□□ -0.63
RTFDC1-209ENST00000487211 ZDHHC16Q969W1 377 aa11.14□□□□□ -0.63
RTFDC1-209ENST00000487211 KDM4CQ9H3R0 1056 aa11.14□□□□□ -0.63
RTFDC1-209ENST00000487211 SMARCA2P51531 1590 aa11.12□□□□□ -0.63
RTFDC1-209ENST00000487211 C6orf132Q5T0Z8 1188 aa11.11□□□□□ -0.63
RTFDC1-209ENST00000487211 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
RTFDC1-209ENST00000487211 SNPHO15079 494 aa11.1□□□□□ -0.63
RTFDC1-209ENST00000487211 LHX6Q9UPM6 363 aa11.1□□□□□ -0.63
RTFDC1-209ENST00000487211 AMHR2Q16671 573 aa11.09□□□□□ -0.63
RTFDC1-209ENST00000487211 ADAM33Q9BZ11 813 aa11.09□□□□□ -0.63
RTFDC1-209ENST00000487211 WIZO95785 1651 aa11.08□□□□□ -0.64
RTFDC1-209ENST00000487211 BAZ1BQ9UIG0 1483 aaKnown RBP11.08□□□□□ -0.64
RTFDC1-209ENST00000487211 IL27Q8NEV9 243 aa11.08□□□□□ -0.64
RTFDC1-209ENST00000487211 CERKQ8TCT0 537 aa11.07□□□□□ -0.64
RTFDC1-209ENST00000487211 HMGXB3Q12766 1538 aa11.06□□□□□ -0.64
RTFDC1-209ENST00000487211 TTLL12Q14166 644 aaPredicted RBP11.06□□□□□ -0.64
RTFDC1-209ENST00000487211 PPP4R3BQ5MIZ7 849 aa11.05□□□□□ -0.64
RTFDC1-209ENST00000487211 PARP9Q8IXQ6 854 aa11.05□□□□□ -0.64
RTFDC1-209ENST00000487211 DAXXQ9UER7 740 aaPredicted RBP11.05□□□□□ -0.64
RTFDC1-209ENST00000487211 PSDA5PKW4 1024 aaPredicted RBP11.04□□□□□ -0.64
RTFDC1-209ENST00000487211 PADI6Q6TGC4 694 aa11.04□□□□□ -0.64
RTFDC1-209ENST00000487211 OTUD5Q96G74 571 aa11.04□□□□□ -0.64
RTFDC1-209ENST00000487211 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
RTFDC1-209ENST00000487211 CYB5RLQ6IPT4 315 aa11.02□□□□□ -0.65
RTFDC1-209ENST00000487211 FAM161AQ3B820 660 aa11.01□□□□□ -0.65
RTFDC1-209ENST00000487211 FAM117AQ9C073 453 aa11.01□□□□□ -0.65
RTFDC1-209ENST00000487211 SUPT5HO00267 1087 aaKnown RBP11□□□□□ -0.65
RTFDC1-209ENST00000487211 PRSS12P56730 875 aa10.99□□□□□ -0.65
RTFDC1-209ENST00000487211 BCL2L12Q9HB09 334 aa10.99□□□□□ -0.65
RTFDC1-209ENST00000487211 RBM27Q9P2N5 1060 aaKnown RBP10.99□□□□□ -0.65
RTFDC1-209ENST00000487211 ARAP1Q96P48 1450 aa10.99□□□□□ -0.65
RTFDC1-209ENST00000487211 OATP04181 439 aa10.98□□□□□ -0.65
RTFDC1-209ENST00000487211 GIGYF2Q6Y7W6 1299 aaKnown RBP10.98□□□□□ -0.65
RTFDC1-209ENST00000487211 CDCA7LQ96GN5 454 aa10.98□□□□□ -0.65
RTFDC1-209ENST00000487211 DDRGK1Q96HY6 314 aa10.98□□□□□ -0.65
RTFDC1-209ENST00000487211 PHOX2BQ99453 314 aa10.98□□□□□ -0.65
RTFDC1-209ENST00000487211 COL9A1P20849 921 aa10.97□□□□□ -0.65
RTFDC1-209ENST00000487211 PTPREP23469 700 aa10.97□□□□□ -0.65
RTFDC1-209ENST00000487211 MDM2Q00987 491 aaPredicted RBP10.97□□□□□ -0.65
RTFDC1-209ENST00000487211 LHX8Q68G74 356 aa10.97□□□□□ -0.65
RTFDC1-209ENST00000487211 TTC13Q8NBP0 860 aa10.97□□□□□ -0.65
RTFDC1-209ENST00000487211 ADGRG1Q9Y653 693 aa10.97□□□□□ -0.65
RTFDC1-209ENST00000487211 KIF21AQ7Z4S6 1674 aa10.97□□□□□ -0.65
RTFDC1-209ENST00000487211 CLCN1P35523 988 aa10.96□□□□□ -0.65
RTFDC1-209ENST00000487211 METTL3Q86U44 580 aaKnown RBP10.96□□□□□ -0.65
RTFDC1-209ENST00000487211 FBXO41Q8TF61 875 aa10.96□□□□□ -0.65
RTFDC1-209ENST00000487211 REPIN1Q9BWE0 567 aaKnown RBP10.96□□□□□ -0.65
RTFDC1-209ENST00000487211 TIMELESSQ9UNS1 1208 aa10.96□□□□□ -0.65
RTFDC1-209ENST00000487211 GPCPD1Q9NPB8 672 aa10.95□□□□□ -0.66
RTFDC1-209ENST00000487211 PLEKHG3A1L390 1219 aa10.94□□□□□ -0.66
RTFDC1-209ENST00000487211 PXYLP1Q8TE99 480 aa10.94□□□□□ -0.66
RTFDC1-209ENST00000487211 NLRP7Q8WX94 980 aa10.94□□□□□ -0.66
RTFDC1-209ENST00000487211 TOP2AP11388 1531 aaKnown RBP10.94□□□□□ -0.66
RTFDC1-209ENST00000487211 PPP1R3GB7ZBB8 358 aa10.93□□□□□ -0.66
RTFDC1-209ENST00000487211 MS4A1P11836 297 aa10.93□□□□□ -0.66
RTFDC1-209ENST00000487211 RBM46Q8TBY0 533 aaKnown RBP10.92□□□□□ -0.66
RTFDC1-209ENST00000487211 TMUB1Q9BVT8 246 aa10.92□□□□□ -0.66
RTFDC1-209ENST00000487211 FAM198AQ9UFP1 575 aa10.92□□□□□ -0.66
RTFDC1-209ENST00000487211 ERICH6Q7L0X2 663 aa10.91□□□□□ -0.66
RTFDC1-209ENST00000487211 KCNK17Q96T54 332 aa10.9□□□□□ -0.66
RTFDC1-209ENST00000487211 CCDC88BA6NC98 1476 aa10.89□□□□□ -0.67
RTFDC1-209ENST00000487211 SSTR3P32745 418 aaPredicted RBP10.89□□□□□ -0.67
RTFDC1-209ENST00000487211 KCNH8Q96L42 1107 aa10.89□□□□□ -0.67
RTFDC1-209ENST00000487211 TSKSQ9UJT2 592 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms