RNA–Protein interactions for RNA: ENST00000487164.5

TCEA2-216, Transcript of transcription elongation factor A2, humanhuman

TSL 1 (best)

Gene TCEA2, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA2-216ENST00000487164 PKD2Q13563 968 aa38.13■■■■□ 3.69
TCEA2-216ENST00000487164 TCOF1Q13428 1488 aaKnown RBP38.13■■■■□ 3.69
TCEA2-216ENST00000487164 KANK4Q5T7N3 995 aaPredicted RBP38.12■■■■□ 3.69
TCEA2-216ENST00000487164 A2ML1A8K2U0 1454 aa38.11■■■■□ 3.69
TCEA2-216ENST00000487164 FAM135AQ9P2D6 1515 aa38.1■■■■□ 3.69
TCEA2-216ENST00000487164 MAP3K1Q13233 1512 aa38.09■■■■□ 3.69
TCEA2-216ENST00000487164 FBXO31Q5XUX0 539 aaPredicted RBP38.09■■■■□ 3.69
TCEA2-216ENST00000487164 DNMT1P26358 1616 aaKnown RBP38.08■■■■□ 3.69
TCEA2-216ENST00000487164 PZPP20742 1482 aa38.08■■■■□ 3.69
TCEA2-216ENST00000487164 WASHC2CQ9Y4E1 1318 aa38.08■■■■□ 3.69
TCEA2-216ENST00000487164 IQSEC2Q5JU85 1478 aa38.07■■■■□ 3.68
TCEA2-216ENST00000487164 ZNF335Q9H4Z2 1342 aaPredicted RBP38.07■■■■□ 3.68
TCEA2-216ENST00000487164 TNRQ92752 1358 aa38.06■■■■□ 3.68
TCEA2-216ENST00000487164 MAST1Q9Y2H9 1570 aa38.02■■■■□ 3.68
TCEA2-216ENST00000487164 MYOM3Q5VTT5 1437 aa38■■■■□ 3.67
TCEA2-216ENST00000487164 MIA2Q96PC5 1412 aa37.98■■■■□ 3.67
TCEA2-216ENST00000487164 RNF17Q9BXT8 1623 aaKnown RBP37.95■■■■□ 3.67
TCEA2-216ENST00000487164 POLR1AO95602 1720 aaPredicted RBP37.91■■■■□ 3.66
TCEA2-216ENST00000487164 ABCC3O15438 1527 aa37.89■■■■□ 3.66
TCEA2-216ENST00000487164 EIF2AK4Q9P2K8 1649 aaKnown RBP37.89■■■■□ 3.66
TCEA2-216ENST00000487164 NEURL4Q96JN8 1562 aa37.89■■■■□ 3.66
TCEA2-216ENST00000487164 NLRP1Q9C000 1473 aa37.87■■■■□ 3.65
TCEA2-216ENST00000487164 ZC3H13Q5T200 1668 aaKnown RBP37.86■■■■□ 3.65
TCEA2-216ENST00000487164 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.84■■■■□ 3.65
TCEA2-216ENST00000487164 MROH1Q8NDA8 1641 aa37.83■■■■□ 3.65
TCEA2-216ENST00000487164 DISP3Q9P2K9 1392 aa37.82■■■■□ 3.65
TCEA2-216ENST00000487164 UGGT1Q9NYU2 1555 aa37.82■■■■□ 3.65
TCEA2-216ENST00000487164 UBAP1LF5GYI3 381 aa37.81■■■■□ 3.64
TCEA2-216ENST00000487164 THEMISQ8N1K5 641 aaPredicted RBP37.81■■■■□ 3.64
TCEA2-216ENST00000487164 DUOX2Q9NRD8 1548 aa37.8■■■■□ 3.64
TCEA2-216ENST00000487164 APLP2Q06481 763 aa37.79■■■■□ 3.64
TCEA2-216ENST00000487164 ANKLE2Q86XL3 938 aa37.79■■■■□ 3.64
TCEA2-216ENST00000487164 SPATA31D1Q6ZQQ2 1576 aa37.78■■■■□ 3.64
TCEA2-216ENST00000487164 PTPN23Q9H3S7 1636 aa37.77■■■■□ 3.64
TCEA2-216ENST00000487164 CEP152O94986 1710 aa37.77■■■■□ 3.64
TCEA2-216ENST00000487164 CROCC2H7BZ55 1655 aa37.76■■■■□ 3.64
TCEA2-216ENST00000487164 ABCC5O15440 1437 aa37.75■■■■□ 3.63
TCEA2-216ENST00000487164 ERVK-7P63135 1459 aa37.75■■■■□ 3.63
TCEA2-216ENST00000487164 SHANK2Q9UPX8 1470 aa37.74■■■■□ 3.63
TCEA2-216ENST00000487164 KIF15Q9NS87 1388 aa37.73■■■■□ 3.63
TCEA2-216ENST00000487164 DEPDC5O75140 1603 aa37.71■■■■□ 3.63
TCEA2-216ENST00000487164 NPHP4O75161 1426 aaPredicted RBP37.7■■■■□ 3.62
TCEA2-216ENST00000487164 RRP7BPQ9NSQ0 103 aa37.69■■■■□ 3.62
TCEA2-216ENST00000487164 CPS1P31327 1500 aa37.69■■■■□ 3.62
TCEA2-216ENST00000487164 CFAP65Q6ZU64 1925 aaKnown RBP37.68■■■■□ 3.62
TCEA2-216ENST00000487164 MED14O60244 1454 aa37.68■■■■□ 3.62
TCEA2-216ENST00000487164 DAPK1P53355 1430 aa37.67■■■■□ 3.62
TCEA2-216ENST00000487164 FGD6Q6ZV73 1430 aa37.66■■■■□ 3.62
TCEA2-216ENST00000487164 ERBINQ96RT1 1412 aa37.66■■■■□ 3.62
TCEA2-216ENST00000487164 VWDEQ8N2E2 1590 aa37.66■■■■□ 3.62
TCEA2-216ENST00000487164 ILDR2Q71H61 639 aa37.65■■■■□ 3.62
TCEA2-216ENST00000487164 PRDM15P57071 1507 aaPredicted RBP37.65■■■■□ 3.62
TCEA2-216ENST00000487164 IQGAP1P46940 1657 aa37.62■■■■□ 3.61
TCEA2-216ENST00000487164 UBR1Q8IWV7 1749 aa37.58■■■■□ 3.61
TCEA2-216ENST00000487164 ARHGAP31Q2M1Z3 1444 aa37.57■■■■□ 3.6
TCEA2-216ENST00000487164 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.57■■■■□ 3.61e-9■□□□□ 10
TCEA2-216ENST00000487164 CHIC2Q9UKJ5 165 aa37.54■■■■□ 3.6
TCEA2-216ENST00000487164 SCAF1Q9H7N4 1312 aaKnown RBP37.52■■■■□ 3.6
TCEA2-216ENST00000487164 TOM1O60784 492 aa37.51■■■■□ 3.6
TCEA2-216ENST00000487164 PIP4K2BP78356 416 aa37.51■■■■□ 3.6
TCEA2-216ENST00000487164 ANKRD30AQ9BXX3 1397 aa37.51■■■■□ 3.59
TCEA2-216ENST00000487164 KANK1Q14678 1352 aa37.48■■■■□ 3.59
TCEA2-216ENST00000487164 STRCP1A6NGW2 1772 aa37.47■■■■□ 3.59
TCEA2-216ENST00000487164 SCAF11Q99590 1463 aaKnown RBP37.46■■■■□ 3.59
TCEA2-216ENST00000487164 ARHGAP23Q9P227 1491 aa37.44■■■■□ 3.58
TCEA2-216ENST00000487164 SLIT1O75093 1534 aa37.43■■■■□ 3.58
TCEA2-216ENST00000487164 LTKP29376 864 aa37.42■■■■□ 3.58
TCEA2-216ENST00000487164 HSPA1LP34931 641 aa37.42■■■■□ 3.58
TCEA2-216ENST00000487164 PIK3C2BO00750 1634 aa37.42■■■■□ 3.58
TCEA2-216ENST00000487164 LMTK2Q8IWU2 1503 aa37.41■■■■□ 3.58
TCEA2-216ENST00000487164 TXNDC2Q86VQ3 553 aa37.4■■■■□ 3.58
TCEA2-216ENST00000487164 LRRC7Q96NW7 1537 aa37.39■■■■□ 3.58
TCEA2-216ENST00000487164 ALKQ9UM73 1620 aa37.39■■■■□ 3.58
TCEA2-216ENST00000487164 SOCS7O14512 581 aa37.38■■■■□ 3.57
TCEA2-216ENST00000487164 ADGRL2O95490 1459 aa37.37■■■■□ 3.57
TCEA2-216ENST00000487164 FAM50AQ14320 339 aaKnown RBP37.36■■■■□ 3.57
TCEA2-216ENST00000487164 SYNMO15061 1565 aa37.36■■■■□ 3.57
TCEA2-216ENST00000487164 EID1Q9Y6B2 187 aa37.33■■■■□ 3.57
TCEA2-216ENST00000487164 STAG3Q9UJ98 1225 aa37.32■■■■□ 3.56
TCEA2-216ENST00000487164 TMEM2Q9UHN6 1383 aa37.31■■■■□ 3.56
TCEA2-216ENST00000487164 EFCAB6Q5THR3 1501 aa37.31■■■■□ 3.56
TCEA2-216ENST00000487164 IDI1Q13907 227 aa37.29■■■■□ 3.56
TCEA2-216ENST00000487164 KDM5AP29375 1690 aaKnown RBP37.28■■■■□ 3.56
TCEA2-216ENST00000487164 NOS1P29475 1434 aa37.26■■■■□ 3.55
TCEA2-216ENST00000487164 ANKRD50Q9ULJ7 1429 aa37.25■■■■□ 3.55
TCEA2-216ENST00000487164 MED1Q15648 1581 aaPredicted RBP37.21■■■■□ 3.55
TCEA2-216ENST00000487164 ADGRB3O60242 1522 aa37.18■■■■□ 3.54
TCEA2-216ENST00000487164 XIRP1Q702N8 1843 aaKnown RBP37.16■■■■□ 3.54
TCEA2-216ENST00000487164 SENP3Q9H4L4 574 aaPredicted RBP37.15■■■■□ 3.54
TCEA2-216ENST00000487164 RPRD2Q5VT52 1461 aaKnown RBP37.13■■■■□ 3.54
TCEA2-216ENST00000487164 SLC52A1Q9NWF4 448 aa37.13■■■■□ 3.53
TCEA2-216ENST00000487164 TET3O43151 1660 aa37.11■■■■□ 3.53
TCEA2-216ENST00000487164 SLC26A8Q96RN1 970 aa37.09■■■■□ 3.53
TCEA2-216ENST00000487164 UNC13BO14795 1591 aa37.07■■■■□ 3.52
TCEA2-216ENST00000487164 KCNA6P17658 529 aa37.04■■■■□ 3.52
TCEA2-216ENST00000487164 GCC2Q8IWJ2 1684 aa37.04■■■■□ 3.52
TCEA2-216ENST00000487164 MYO5BQ9ULV0 1848 aa37.03■■■■□ 3.52
TCEA2-216ENST00000487164 TMEM94Q12767 1356 aa37.02■■■■□ 3.52
TCEA2-216ENST00000487164 ROCK1Q13464 1354 aa37.01■■■■□ 3.51
TCEA2-216ENST00000487164 BCANQ96GW7 911 aa36.98■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms