RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ZFYVE16Q7Z3T8 1539 aa10.19□□□□□ -0.78
SF3A3-206ENST00000487062 ERBINQ96RT1 1412 aa10.19□□□□□ -0.78
SF3A3-206ENST00000487062 SIN3AQ96ST3 1273 aa10.19□□□□□ -0.78
SF3A3-206ENST00000487062 DIP2BQ9P265 1576 aa10.18□□□□□ -0.78
SF3A3-206ENST00000487062 PZPP20742 1482 aa10.18□□□□□ -0.78
SF3A3-206ENST00000487062 ZNF518AQ6AHZ1 1483 aa10.18□□□□□ -0.78
SF3A3-206ENST00000487062 TONSLQ96HA7 1378 aa10.18□□□□□ -0.78
SF3A3-206ENST00000487062 DENND4BO75064 1496 aaPredicted RBP10.17□□□□□ -0.78
SF3A3-206ENST00000487062 NUP155O75694 1391 aa10.17□□□□□ -0.78
SF3A3-206ENST00000487062 AFAP1Q8N556 730 aa10.16□□□□□ -0.78
SF3A3-206ENST00000487062 MYT1LQ9UL68 1186 aa10.16□□□□□ -0.78
SF3A3-206ENST00000487062 IQGAP3Q86VI3 1631 aa10.15□□□□□ -0.78
SF3A3-206ENST00000487062 EIF2AK4Q9P2K8 1649 aaKnown RBP10.15□□□□□ -0.78
SF3A3-206ENST00000487062 KDM5CP41229 1560 aa10.15□□□□□ -0.78
SF3A3-206ENST00000487062 KIDINS220Q9ULH0 1771 aa10.15□□□□□ -0.78
SF3A3-206ENST00000487062 POGZQ7Z3K3 1410 aa10.15□□□□□ -0.79
SF3A3-206ENST00000487062 HECW2Q9P2P5 1572 aa10.14□□□□□ -0.79
SF3A3-206ENST00000487062 ZNF316A6NFI3 1004 aaPredicted RBP10.14□□□□□ -0.79
SF3A3-206ENST00000487062 ANKRD30BQ9BXX2 1392 aa10.14□□□□□ -0.79
SF3A3-206ENST00000487062 FAM135AQ9P2D6 1515 aa10.13□□□□□ -0.79
SF3A3-206ENST00000487062 TSPOAP1O95153 1857 aa10.13□□□□□ -0.79
SF3A3-206ENST00000487062 MAGI2Q86UL8 1455 aa10.13□□□□□ -0.79
SF3A3-206ENST00000487062 TEX14Q8IWB6 1497 aa10.13□□□□□ -0.79
SF3A3-206ENST00000487062 KIF13AQ9H1H9 1805 aa10.13□□□□□ -0.79
SF3A3-206ENST00000487062 CACNB1Q02641 598 aaPredicted RBP10.13□□□□□ -0.79
SF3A3-206ENST00000487062 FAM69CQ0P6D2 419 aa10.13□□□□□ -0.79
SF3A3-206ENST00000487062 PKD2Q13563 968 aa10.13□□□□□ -0.79
SF3A3-206ENST00000487062 DMRT2Q9Y5R5 561 aa10.13□□□□□ -0.79
SF3A3-206ENST00000487062 RPRD2Q5VT52 1461 aaKnown RBP10.12□□□□□ -0.79
SF3A3-206ENST00000487062 MLH3Q9UHC1 1453 aa10.12□□□□□ -0.79
SF3A3-206ENST00000487062 DEPDC5O75140 1603 aa10.12□□□□□ -0.79
SF3A3-206ENST00000487062 RICTORQ6R327 1708 aa10.12□□□□□ -0.79
SF3A3-206ENST00000487062 PPP1R15AO75807 674 aaPredicted RBP10.11□□□□□ -0.79
SF3A3-206ENST00000487062 DHX29Q7Z478 1369 aaKnown RBP10.11□□□□□ -0.79
SF3A3-206ENST00000487062 PPRC1Q5VV67 1664 aaKnown RBP10.1□□□□□ -0.79
SF3A3-206ENST00000487062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.1□□□□□ -0.792e-6■■□□□ 11.5
SF3A3-206ENST00000487062 KANK1Q14678 1352 aa10.1□□□□□ -0.79
SF3A3-206ENST00000487062 A2MP01023 1474 aa10.09□□□□□ -0.79
SF3A3-206ENST00000487062 ABCA6Q8N139 1617 aa10.08□□□□□ -0.8
SF3A3-206ENST00000487062 BCORL1Q5H9F3 1711 aa10.08□□□□□ -0.8
SF3A3-206ENST00000487062 TET3O43151 1660 aa10.08□□□□□ -0.8
SF3A3-206ENST00000487062 RNF17Q9BXT8 1623 aaKnown RBP10.07□□□□□ -0.8
SF3A3-206ENST00000487062 PRDM15P57071 1507 aaPredicted RBP10.07□□□□□ -0.8
SF3A3-206ENST00000487062 ZMYM4Q5VZL5 1548 aa10.07□□□□□ -0.8
SF3A3-206ENST00000487062 KIF3BO15066 747 aa10.06□□□□□ -0.8
SF3A3-206ENST00000487062 VWDEQ8N2E2 1590 aa10.05□□□□□ -0.8
SF3A3-206ENST00000487062 DIP2CQ9Y2E4 1556 aa10.05□□□□□ -0.8
SF3A3-206ENST00000487062 RAPGEF3O95398 923 aa10.05□□□□□ -0.8
SF3A3-206ENST00000487062 E9PCH4 1651 aa10.05□□□□□ -0.8
SF3A3-206ENST00000487062 FRMPD1Q5SYB0 1578 aa10.05□□□□□ -0.8
SF3A3-206ENST00000487062 SPHKAPQ2M3C7 1700 aa10.04□□□□□ -0.8
SF3A3-206ENST00000487062 L3MBTL2Q969R5 705 aa10.04□□□□□ -0.8
SF3A3-206ENST00000487062 CCDC144AA2RUR9 1427 aa10.04□□□□□ -0.8
SF3A3-206ENST00000487062 ATP10AO60312 1499 aa10.04□□□□□ -0.8
SF3A3-206ENST00000487062 MROH1Q8NDA8 1641 aa10.04□□□□□ -0.8
SF3A3-206ENST00000487062 CEP152O94986 1710 aa10.03□□□□□ -0.8
SF3A3-206ENST00000487062 DIEXFQ68CQ4 756 aaKnown RBP10.02□□□□□ -0.81
SF3A3-206ENST00000487062 LMTK2Q8IWU2 1503 aa10.02□□□□□ -0.81
SF3A3-206ENST00000487062 ZC3H13Q5T200 1668 aaKnown RBP10.01□□□□□ -0.81
SF3A3-206ENST00000487062 TRPM2O94759 1503 aa10□□□□□ -0.81
SF3A3-206ENST00000487062 EFCAB6Q5THR3 1501 aa10□□□□□ -0.81
SF3A3-206ENST00000487062 REREQ9P2R6 1566 aa10□□□□□ -0.81
SF3A3-206ENST00000487062 YEATS2Q9ULM3 1422 aa9.99□□□□□ -0.81
SF3A3-206ENST00000487062 PLA2R1Q13018 1463 aa9.98□□□□□ -0.81
SF3A3-206ENST00000487062 KIF1BO60333 1816 aa9.98□□□□□ -0.81
SF3A3-206ENST00000487062 PTPRTO14522 1441 aa9.98□□□□□ -0.81
SF3A3-206ENST00000487062 CAMSAP1Q5T5Y3 1602 aa9.97□□□□□ -0.81
SF3A3-206ENST00000487062 GGT6Q6P531 493 aa9.97□□□□□ -0.81
SF3A3-206ENST00000487062 UHRF1BP1Q6BDS2 1440 aa9.97□□□□□ -0.81
SF3A3-206ENST00000487062 AGLP35573 1532 aa9.97□□□□□ -0.81
SF3A3-206ENST00000487062 WASHC2CQ9Y4E1 1318 aa9.96□□□□□ -0.82
SF3A3-206ENST00000487062 ABCC3O15438 1527 aa9.96□□□□□ -0.82
SF3A3-206ENST00000487062 ARHGEF40Q8TER5 1519 aa9.96□□□□□ -0.82
SF3A3-206ENST00000487062 CLTCL1P53675 1640 aa9.96□□□□□ -0.82
SF3A3-206ENST00000487062 EIF4G2P78344 907 aaKnown RBP eCLIP9.95□□□□□ -0.82
SF3A3-206ENST00000487062 NBPF8Q3BBV2 869 aa9.95□□□□□ -0.82
SF3A3-206ENST00000487062 NEURL4Q96JN8 1562 aa9.95□□□□□ -0.82
SF3A3-206ENST00000487062 CFAP65Q6ZU64 1925 aaKnown RBP9.94□□□□□ -0.82
SF3A3-206ENST00000487062 DCAF11Q8TEB1 546 aa9.94□□□□□ -0.82
SF3A3-206ENST00000487062 STAC3Q96MF2 364 aa9.94□□□□□ -0.82
SF3A3-206ENST00000487062 RALGAPBQ86X10 1494 aa9.93□□□□□ -0.82
SF3A3-206ENST00000487062 CNTLNQ9NXG0 1405 aa9.93□□□□□ -0.82
SF3A3-206ENST00000487062 RGL3Q3MIN7 710 aa9.93□□□□□ -0.82
SF3A3-206ENST00000487062 ZNF326Q5BKZ1 582 aaKnown RBP9.93□□□□□ -0.82
SF3A3-206ENST00000487062 DNAJC5Q9H3Z4 198 aa9.93□□□□□ -0.82
SF3A3-206ENST00000487062 COL17A1Q9UMD9 1497 aaPredicted RBP9.92□□□□□ -0.82
SF3A3-206ENST00000487062 ARHGAP31Q2M1Z3 1444 aa9.92□□□□□ -0.82
SF3A3-206ENST00000487062 SPATA31E1Q6ZUB1 1445 aa9.92□□□□□ -0.82
SF3A3-206ENST00000487062 TRHP20396 242 aaPredicted RBP9.92□□□□□ -0.82
SF3A3-206ENST00000487062 ATF5Q9Y2D1 282 aaPredicted RBP9.92□□□□□ -0.82
SF3A3-206ENST00000487062 KDM2AQ9Y2K7 1162 aa9.92□□□□□ -0.82
SF3A3-206ENST00000487062 POLR1AO95602 1720 aaPredicted RBP9.92□□□□□ -0.82
SF3A3-206ENST00000487062 TRPM1Q7Z4N2 1603 aa9.92□□□□□ -0.82
SF3A3-206ENST00000487062 NPATQ14207 1427 aa9.91□□□□□ -0.82
SF3A3-206ENST00000487062 HSPA5P11021 654 aaKnown RBP9.91□□□□□ -0.82
SF3A3-206ENST00000487062 PLCB2Q00722 1185 aa9.91□□□□□ -0.82
SF3A3-206ENST00000487062 LAMC1P11047 1609 aa9.9□□□□□ -0.82
SF3A3-206ENST00000487062 PRAG1Q86YV5 1406 aa9.9□□□□□ -0.83
SF3A3-206ENST00000487062 PREX1Q8TCU6 1659 aa9.9□□□□□ -0.83
SF3A3-206ENST00000487062 HIRIP3Q9BW71 556 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms