RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 NCOA1Q15788 1441 aa19.32■□□□□ 0.68
HDAC6-229ENST00000486665 LTBP4Q8N2S1 1624 aa19.31■□□□□ 0.68
HDAC6-229ENST00000486665 PCGF6Q9BYE7 350 aa19.29■□□□□ 0.68
HDAC6-229ENST00000486665 ZMYM3Q14202 1370 aa19.29■□□□□ 0.68
HDAC6-229ENST00000486665 CAMSAP1Q5T5Y3 1602 aa19.29■□□□□ 0.68
HDAC6-229ENST00000486665 A2MP01023 1474 aa19.28■□□□□ 0.68
HDAC6-229ENST00000486665 SHANK2Q9UPX8 1470 aa19.28■□□□□ 0.68
HDAC6-229ENST00000486665 NPATQ14207 1427 aa19.27■□□□□ 0.68
HDAC6-229ENST00000486665 RRP7BPQ9NSQ0 103 aa19.27■□□□□ 0.68
HDAC6-229ENST00000486665 CROCC2H7BZ55 1655 aa19.27■□□□□ 0.67
HDAC6-229ENST00000486665 RTEL1-TNFRSF6BF6WH68 1400 aa19.26■□□□□ 0.67
HDAC6-229ENST00000486665 MYO3AQ8NEV4 1616 aa19.26■□□□□ 0.67
HDAC6-229ENST00000486665 MAST1Q9Y2H9 1570 aa19.26■□□□□ 0.67
HDAC6-229ENST00000486665 ADGBQ8N7X0 1667 aa19.25■□□□□ 0.67
HDAC6-229ENST00000486665 ZNF142P52746 1687 aaPredicted RBP19.24■□□□□ 0.67
HDAC6-229ENST00000486665 ADGRL2O95490 1459 aa19.23■□□□□ 0.67
HDAC6-229ENST00000486665 ROCK1Q13464 1354 aa19.23■□□□□ 0.67
HDAC6-229ENST00000486665 ANKRD30AQ9BXX3 1397 aa19.23■□□□□ 0.67
HDAC6-229ENST00000486665 NCKAP5LQ9HCH0 1330 aa19.22■□□□□ 0.67
HDAC6-229ENST00000486665 GGT6Q6P531 493 aa19.21■□□□□ 0.67
HDAC6-229ENST00000486665 CEP170BQ9Y4F5 1589 aaPredicted RBP19.2■□□□□ 0.66
HDAC6-229ENST00000486665 KIF15Q9NS87 1388 aa19.19■□□□□ 0.66
HDAC6-229ENST00000486665 NAIPQ13075 1403 aa19.17■□□□□ 0.66
HDAC6-229ENST00000486665 ILDR2Q71H61 639 aa19.17■□□□□ 0.66
HDAC6-229ENST00000486665 ZNF335Q9H4Z2 1342 aaPredicted RBP19.16■□□□□ 0.66
HDAC6-229ENST00000486665 DISP3Q9P2K9 1392 aa19.16■□□□□ 0.66
HDAC6-229ENST00000486665 HFM1A2PYH4 1435 aa19.16■□□□□ 0.66
HDAC6-229ENST00000486665 DHX29Q7Z478 1369 aaKnown RBP19.15■□□□□ 0.66
HDAC6-229ENST00000486665 PLA2R1Q13018 1463 aa19.15■□□□□ 0.66
HDAC6-229ENST00000486665 IQSEC2Q5JU85 1478 aa19.15■□□□□ 0.66
HDAC6-229ENST00000486665 SETD5Q9C0A6 1442 aa19.13■□□□□ 0.65
HDAC6-229ENST00000486665 DUOX2Q9NRD8 1548 aa19.12■□□□□ 0.65
HDAC6-229ENST00000486665 ANKRD50Q9ULJ7 1429 aa19.11■□□□□ 0.65
HDAC6-229ENST00000486665 SPATA31D1Q6ZQQ2 1576 aa19.1■□□□□ 0.65
HDAC6-229ENST00000486665 A2ML1A8K2U0 1454 aa19.09■□□□□ 0.65
HDAC6-229ENST00000486665 FBXO31Q5XUX0 539 aaPredicted RBP19.09■□□□□ 0.65
HDAC6-229ENST00000486665 RAB3GAP2Q9H2M9 1393 aa19.08■□□□□ 0.65
HDAC6-229ENST00000486665 PKD2Q13563 968 aa19.08■□□□□ 0.64
HDAC6-229ENST00000486665 PPP6R1Q9UPN7 881 aa19.08■□□□□ 0.64
HDAC6-229ENST00000486665 NEURL4Q96JN8 1562 aa19.07■□□□□ 0.64
HDAC6-229ENST00000486665 KIF3BO15066 747 aa19.07■□□□□ 0.64
HDAC6-229ENST00000486665 GCC2Q8IWJ2 1684 aa19.07■□□□□ 0.64
HDAC6-229ENST00000486665 ERBINQ96RT1 1412 aa19.07■□□□□ 0.64
HDAC6-229ENST00000486665 POLR1AO95602 1720 aaPredicted RBP19.06■□□□□ 0.64
HDAC6-229ENST00000486665 KDM5DQ9BY66 1539 aa19.05■□□□□ 0.64
HDAC6-229ENST00000486665 PZPP20742 1482 aa19.04■□□□□ 0.64
HDAC6-229ENST00000486665 TNRQ92752 1358 aa19.04■□□□□ 0.64
HDAC6-229ENST00000486665 HRCP23327 699 aa19.03■□□□□ 0.64
HDAC6-229ENST00000486665 UBAP1LF5GYI3 381 aa19.02■□□□□ 0.64
HDAC6-229ENST00000486665 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.01■□□□□ 0.63
HDAC6-229ENST00000486665 TRIM52Q96A61 297 aa19■□□□□ 0.63
HDAC6-229ENST00000486665 FAM135AQ9P2D6 1515 aa19■□□□□ 0.63
HDAC6-229ENST00000486665 WASHC2CQ9Y4E1 1318 aa18.99■□□□□ 0.63
HDAC6-229ENST00000486665 RNF17Q9BXT8 1623 aaKnown RBP18.98■□□□□ 0.63
HDAC6-229ENST00000486665 EIF2AK4Q9P2K8 1649 aaKnown RBP18.98■□□□□ 0.63
HDAC6-229ENST00000486665 SOCS7O14512 581 aa18.97■□□□□ 0.63
HDAC6-229ENST00000486665 NUP155O75694 1391 aa18.96■□□□□ 0.63
HDAC6-229ENST00000486665 VWDEQ8N2E2 1590 aa18.96■□□□□ 0.63
HDAC6-229ENST00000486665 MROH1Q8NDA8 1641 aa18.96■□□□□ 0.63
HDAC6-229ENST00000486665 ABCC3O15438 1527 aa18.95■□□□□ 0.62
HDAC6-229ENST00000486665 UGGT1Q9NYU2 1555 aa18.93■□□□□ 0.62
HDAC6-229ENST00000486665 UNC13BO14795 1591 aa18.93■□□□□ 0.62
HDAC6-229ENST00000486665 DEPDC5O75140 1603 aa18.92■□□□□ 0.62
HDAC6-229ENST00000486665 NLRP1Q9C000 1473 aa18.92■□□□□ 0.62
HDAC6-229ENST00000486665 CEP152O94986 1710 aa18.92■□□□□ 0.62
HDAC6-229ENST00000486665 STRCP1A6NGW2 1772 aa18.91■□□□□ 0.62
HDAC6-229ENST00000486665 CPS1P31327 1500 aa18.91■□□□□ 0.62
HDAC6-229ENST00000486665 CFAP65Q6ZU64 1925 aaKnown RBP18.91■□□□□ 0.62
HDAC6-229ENST00000486665 ALKQ9UM73 1620 aa18.91■□□□□ 0.62
HDAC6-229ENST00000486665 ACIN1Q9UKV3 1341 aaKnown RBP18.91■□□□□ 0.62
HDAC6-229ENST00000486665 ZC3H13Q5T200 1668 aaKnown RBP18.91■□□□□ 0.62
HDAC6-229ENST00000486665 MPHOSPH9Q99550 1183 aa18.9■□□□□ 0.62
HDAC6-229ENST00000486665 KANK1Q14678 1352 aa18.9■□□□□ 0.62
HDAC6-229ENST00000486665 MED14O60244 1454 aa18.9■□□□□ 0.62
HDAC6-229ENST00000486665 NPHP4O75161 1426 aaPredicted RBP18.89■□□□□ 0.61
HDAC6-229ENST00000486665 ERVK-7P63135 1459 aa18.89■□□□□ 0.61
HDAC6-229ENST00000486665 PRDM15P57071 1507 aaPredicted RBP18.89■□□□□ 0.61
HDAC6-229ENST00000486665 IQGAP1P46940 1657 aa18.89■□□□□ 0.61
HDAC6-229ENST00000486665 ANKLE2Q86XL3 938 aa18.88■□□□□ 0.61
HDAC6-229ENST00000486665 SLC4A1APQ9BWU0 796 aaKnown RBP18.88■□□□□ 0.61
HDAC6-229ENST00000486665 HSPA1LP34931 641 aa18.87■□□□□ 0.61
HDAC6-229ENST00000486665 PIP4K2BP78356 416 aa18.87■□□□□ 0.61
HDAC6-229ENST00000486665 THEMISQ8N1K5 641 aaPredicted RBP18.87■□□□□ 0.61
HDAC6-229ENST00000486665 UBR1Q8IWV7 1749 aa18.86■□□□□ 0.61
HDAC6-229ENST00000486665 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
HDAC6-229ENST00000486665 IQGAP3Q86VI3 1631 aa18.85■□□□□ 0.61
HDAC6-229ENST00000486665 DHX57Q6P158 1386 aaKnown RBP18.84■□□□□ 0.61
HDAC6-229ENST00000486665 FOXD1Q16676 465 aa18.84■□□□□ 0.61
HDAC6-229ENST00000486665 LMTK2Q8IWU2 1503 aa18.83■□□□□ 0.6
HDAC6-229ENST00000486665 MED1Q15648 1581 aaPredicted RBP18.82■□□□□ 0.6
HDAC6-229ENST00000486665 LRRC7Q96NW7 1537 aa18.8■□□□□ 0.6
HDAC6-229ENST00000486665 TOM1O60784 492 aa18.8■□□□□ 0.6
HDAC6-229ENST00000486665 TET3O43151 1660 aa18.77■□□□□ 0.6
HDAC6-229ENST00000486665 EFCAB6Q5THR3 1501 aa18.76■□□□□ 0.59
HDAC6-229ENST00000486665 LTKP29376 864 aa18.76■□□□□ 0.59
HDAC6-229ENST00000486665 XIRP1Q702N8 1843 aaKnown RBP18.76■□□□□ 0.59
HDAC6-229ENST00000486665 ARHGAP23Q9P227 1491 aa18.76■□□□□ 0.59
HDAC6-229ENST00000486665 SYNMO15061 1565 aa18.76■□□□□ 0.59
HDAC6-229ENST00000486665 ARHGAP31Q2M1Z3 1444 aa18.75■□□□□ 0.59
HDAC6-229ENST00000486665 PIK3C2BO00750 1634 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms