RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 ATP7AQ04656 1500 aa28.59■■■□□ 2.17
HPS3-206ENST00000486530 SPATA31E1Q6ZUB1 1445 aa28.59■■■□□ 2.17
HPS3-206ENST00000486530 WASHC2AQ641Q2 1341 aa28.56■■■□□ 2.16
HPS3-206ENST00000486530 NEO1Q92859 1461 aa28.56■■■□□ 2.16
HPS3-206ENST00000486530 ANP32CO43423 234 aa28.56■■■□□ 2.16
HPS3-206ENST00000486530 ZNF518AQ6AHZ1 1483 aa28.56■■■□□ 2.16
HPS3-206ENST00000486530 MAP3K4Q9Y6R4 1608 aa28.56■■■□□ 2.16
HPS3-206ENST00000486530 CCDC144AA2RUR9 1427 aa28.55■■■□□ 2.16
HPS3-206ENST00000486530 DEPDC5O75140 1603 aa28.55■■■□□ 2.16
HPS3-206ENST00000486530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.55■■■□□ 2.16
HPS3-206ENST00000486530 RALGAPBQ86X10 1494 aa28.54■■■□□ 2.16
HPS3-206ENST00000486530 DNAJC5Q9H3Z4 198 aa28.53■■■□□ 2.16
HPS3-206ENST00000486530 ATP10AO60312 1499 aa28.53■■■□□ 2.16
HPS3-206ENST00000486530 POGZQ7Z3K3 1410 aa28.52■■■□□ 2.16
HPS3-206ENST00000486530 PLA2R1Q13018 1463 aa28.51■■■□□ 2.15
HPS3-206ENST00000486530 EIF2AK4Q9P2K8 1649 aaKnown RBP28.51■■■□□ 2.15
HPS3-206ENST00000486530 CCER2I3L3R5 266 aa28.51■■■□□ 2.15
HPS3-206ENST00000486530 KDM5CP41229 1560 aa28.5■■■□□ 2.15
HPS3-206ENST00000486530 FAM69CQ0P6D2 419 aa28.49■■■□□ 2.15
HPS3-206ENST00000486530 MYT1LQ9UL68 1186 aa28.49■■■□□ 2.15
HPS3-206ENST00000486530 KIDINS220Q9ULH0 1771 aa28.49■■■□□ 2.15
HPS3-206ENST00000486530 DHX29Q7Z478 1369 aaKnown RBP28.49■■■□□ 2.15
HPS3-206ENST00000486530 CCDC7Q96M83 1385 aa28.49■■■□□ 2.15
HPS3-206ENST00000486530 GTF3C3Q9Y5Q9 886 aa28.48■■■□□ 2.15
HPS3-206ENST00000486530 DIP2BQ9P265 1576 aa28.47■■■□□ 2.15
HPS3-206ENST00000486530 CNTLNQ9NXG0 1405 aa28.46■■■□□ 2.15
HPS3-206ENST00000486530 MLH3Q9UHC1 1453 aa28.46■■■□□ 2.15
HPS3-206ENST00000486530 ZNF326Q5BKZ1 582 aaKnown RBP28.45■■■□□ 2.15
HPS3-206ENST00000486530 USP47Q96K76 1375 aa28.44■■■□□ 2.14
HPS3-206ENST00000486530 E9PCH4 1651 aa28.44■■■□□ 2.14
HPS3-206ENST00000486530 TET3O43151 1660 aa28.42■■■□□ 2.14
HPS3-206ENST00000486530 RAPGEF3O95398 923 aa28.41■■■□□ 2.14
HPS3-206ENST00000486530 VWDEQ8N2E2 1590 aa28.4■■■□□ 2.14
HPS3-206ENST00000486530 DCAF11Q8TEB1 546 aa28.4■■■□□ 2.14
HPS3-206ENST00000486530 C11orf95C9JLR9 678 aaPredicted RBP28.39■■■□□ 2.14
HPS3-206ENST00000486530 TRPM1Q7Z4N2 1603 aa28.39■■■□□ 2.14
HPS3-206ENST00000486530 PRDM15P57071 1507 aaPredicted RBP28.39■■■□□ 2.13
HPS3-206ENST00000486530 KIF3BO15066 747 aa28.38■■■□□ 2.13
HPS3-206ENST00000486530 SPHKAPQ2M3C7 1700 aa28.38■■■□□ 2.13
HPS3-206ENST00000486530 BCORL1Q5H9F3 1711 aa28.37■■■□□ 2.13
HPS3-206ENST00000486530 HECW2Q9P2P5 1572 aa28.37■■■□□ 2.13
HPS3-206ENST00000486530 A2MP01023 1474 aa28.36■■■□□ 2.13
HPS3-206ENST00000486530 PRAG1Q86YV5 1406 aa28.36■■■□□ 2.13
HPS3-206ENST00000486530 TRPM2O94759 1503 aa28.36■■■□□ 2.13
HPS3-206ENST00000486530 KIF7Q2M1P5 1343 aa28.35■■■□□ 2.13
HPS3-206ENST00000486530 KANK1Q14678 1352 aa28.35■■■□□ 2.13
HPS3-206ENST00000486530 KDM2AQ9Y2K7 1162 aa28.35■■■□□ 2.13
HPS3-206ENST00000486530 MROH1Q8NDA8 1641 aa28.34■■■□□ 2.13
HPS3-206ENST00000486530 CEP152O94986 1710 aa28.33■■■□□ 2.13
HPS3-206ENST00000486530 RICTORQ6R327 1708 aa28.32■■■□□ 2.12
HPS3-206ENST00000486530 CARD11Q9BXL7 1154 aa28.32■■■□□ 2.12
HPS3-206ENST00000486530 LAMC1P11047 1609 aa28.31■■■□□ 2.12
HPS3-206ENST00000486530 ARID4BQ4LE39 1312 aaPredicted RBP28.31■■■□□ 2.12
HPS3-206ENST00000486530 PPRC1Q5VV67 1664 aaKnown RBP28.3■■■□□ 2.12
HPS3-206ENST00000486530 FRMPD1Q5SYB0 1578 aa28.29■■■□□ 2.12
HPS3-206ENST00000486530 PTPRTO14522 1441 aa28.29■■■□□ 2.12
HPS3-206ENST00000486530 RNF17Q9BXT8 1623 aaKnown RBP28.28■■■□□ 2.12
HPS3-206ENST00000486530 ROCK2O75116 1388 aaKnown RBP28.28■■■□□ 2.12
HPS3-206ENST00000486530 ABCA6Q8N139 1617 aa28.28■■■□□ 2.12
HPS3-206ENST00000486530 RGL3Q3MIN7 710 aa28.25■■■□□ 2.11
HPS3-206ENST00000486530 TSPOAP1O95153 1857 aa28.24■■■□□ 2.11
HPS3-206ENST00000486530 CLTCL1P53675 1640 aa28.24■■■□□ 2.11
HPS3-206ENST00000486530 GPRASP1Q5JY77 1395 aa28.24■■■□□ 2.11
HPS3-206ENST00000486530 EFCAB6Q5THR3 1501 aa28.22■■■□□ 2.11
HPS3-206ENST00000486530 DIP2CQ9Y2E4 1556 aa28.21■■■□□ 2.11
HPS3-206ENST00000486530 LMTK2Q8IWU2 1503 aa28.21■■■□□ 2.11
HPS3-206ENST00000486530 KIF13AQ9H1H9 1805 aa28.21■■■□□ 2.11
HPS3-206ENST00000486530 NEURL4Q96JN8 1562 aa28.2■■■□□ 2.11
HPS3-206ENST00000486530 YEATS2Q9ULM3 1422 aa28.18■■■□□ 2.1
HPS3-206ENST00000486530 ZMYM4Q5VZL5 1548 aa28.16■■■□□ 2.1
HPS3-206ENST00000486530 MADDQ8WXG6 1647 aa28.16■■■□□ 2.1
HPS3-206ENST00000486530 TRHP20396 242 aaPredicted RBP28.16■■■□□ 2.1
HPS3-206ENST00000486530 PRKRIP1Q9H875 184 aaPredicted RBP28.15■■■□□ 2.1
HPS3-206ENST00000486530 ST20-MTHFSA0A0A6YYL1 179 aa28.14■■■□□ 2.1
HPS3-206ENST00000486530 GGT6Q6P531 493 aa28.13■■■□□ 2.09
HPS3-206ENST00000486530 STAC3Q96MF2 364 aa28.12■■■□□ 2.09
HPS3-206ENST00000486530 KIF1BO60333 1816 aa28.11■■■□□ 2.09
HPS3-206ENST00000486530 NBPF1Q3BBV0 1214 aa28.08■■■□□ 2.09
HPS3-206ENST00000486530 COL17A1Q9UMD9 1497 aaPredicted RBP28.06■■■□□ 2.08
HPS3-206ENST00000486530 POLR3GLQ9BT43 218 aa28.05■■■□□ 2.08
HPS3-206ENST00000486530 KIAA1210Q9ULL0 1709 aa28.04■■■□□ 2.08
HPS3-206ENST00000486530 ABCC3O15438 1527 aa28.04■■■□□ 2.08
HPS3-206ENST00000486530 WASHC2CQ9Y4E1 1318 aa28.04■■■□□ 2.08
HPS3-206ENST00000486530 IQGAP1P46940 1657 aa28.03■■■□□ 2.08
HPS3-206ENST00000486530 IFT172Q9UG01 1749 aa28.02■■■□□ 2.08
HPS3-206ENST00000486530 UGGT1Q9NYU2 1555 aa28.01■■■□□ 2.08
HPS3-206ENST00000486530 NPATQ14207 1427 aa28■■■□□ 2.07
HPS3-206ENST00000486530 MYOM2P54296 1465 aa27.99■■■□□ 2.07
HPS3-206ENST00000486530 MROH2AA6NES4 1674 aa27.99■■■□□ 2.07
HPS3-206ENST00000486530 CAMSAP1Q5T5Y3 1602 aa27.98■■■□□ 2.07
HPS3-206ENST00000486530 ZC3H13Q5T200 1668 aaKnown RBP27.97■■■□□ 2.07
HPS3-206ENST00000486530 REREQ9P2R6 1566 aa27.96■■■□□ 2.07
HPS3-206ENST00000486530 ADGRB3O60242 1522 aa27.95■■■□□ 2.06
HPS3-206ENST00000486530 MRS2Q9HD23 443 aa27.93■■■□□ 2.06
HPS3-206ENST00000486530 CCDC184Q52MB2 194 aa27.92■■■□□ 2.06
HPS3-206ENST00000486530 TESK2Q96S53 571 aa27.92■■■□□ 2.06
HPS3-206ENST00000486530 AGLP35573 1532 aa27.91■■■□□ 2.06
HPS3-206ENST00000486530 ARHGAP31Q2M1Z3 1444 aa27.9■■■□□ 2.06
HPS3-206ENST00000486530 CFAP65Q6ZU64 1925 aaKnown RBP27.9■■■□□ 2.06
HPS3-206ENST00000486530 SCAF11Q99590 1463 aaKnown RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms