RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 EIF2AK4Q9P2K8 1649 aaKnown RBP28.45■■■□□ 2.14
CLDN11-206ENST00000486429 RNF17Q9BXT8 1623 aaKnown RBP28.43■■■□□ 2.14
CLDN11-206ENST00000486429 DUOX2Q9NRD8 1548 aa28.41■■■□□ 2.14
CLDN11-206ENST00000486429 KIF15Q9NS87 1388 aa28.38■■■□□ 2.13
CLDN11-206ENST00000486429 PTPRKQ15262 1439 aa28.38■■■□□ 2.13
CLDN11-206ENST00000486429 MYO3AQ8NEV4 1616 aa28.37■■■□□ 2.13
CLDN11-206ENST00000486429 ZC3H13Q5T200 1668 aaKnown RBP28.34■■■□□ 2.13
CLDN11-206ENST00000486429 ERBINQ96RT1 1412 aa28.33■■■□□ 2.13
CLDN11-206ENST00000486429 MROH1Q8NDA8 1641 aa28.32■■■□□ 2.12
CLDN11-206ENST00000486429 ZNF142P52746 1687 aaPredicted RBP28.32■■■□□ 2.12
CLDN11-206ENST00000486429 WASHC2CQ9Y4E1 1318 aa28.32■■■□□ 2.12
CLDN11-206ENST00000486429 PZPP20742 1482 aa28.32■■■□□ 2.12
CLDN11-206ENST00000486429 FAM50AQ14320 339 aaKnown RBP28.31■■■□□ 2.12
CLDN11-206ENST00000486429 ABCC3O15438 1527 aa28.3■■■□□ 2.12
CLDN11-206ENST00000486429 ANKRD30AQ9BXX3 1397 aa28.3■■■□□ 2.12
CLDN11-206ENST00000486429 RRP7BPQ9NSQ0 103 aa28.28■■■□□ 2.12
CLDN11-206ENST00000486429 CEP170BQ9Y4F5 1589 aaPredicted RBP28.28■■■□□ 2.12
CLDN11-206ENST00000486429 STRCQ7RTU9 1775 aa28.27■■■□□ 2.12
CLDN11-206ENST00000486429 PRDM15P57071 1507 aaPredicted RBP28.27■■■□□ 2.12
CLDN11-206ENST00000486429 ADGRL2O95490 1459 aa28.27■■■□□ 2.12
CLDN11-206ENST00000486429 CHIC2Q9UKJ5 165 aa28.25■■■□□ 2.11
CLDN11-206ENST00000486429 CEP152O94986 1710 aa28.23■■■□□ 2.11
CLDN11-206ENST00000486429 DEPDC5O75140 1603 aa28.23■■■□□ 2.11
CLDN11-206ENST00000486429 NCOA1Q15788 1441 aa28.23■■■□□ 2.11
CLDN11-206ENST00000486429 TNRQ92752 1358 aa28.23■■■□□ 2.11
CLDN11-206ENST00000486429 CAMSAP1Q5T5Y3 1602 aa28.22■■■□□ 2.11
CLDN11-206ENST00000486429 A2ML1A8K2U0 1454 aa28.19■■■□□ 2.1
CLDN11-206ENST00000486429 FBXO31Q5XUX0 539 aaPredicted RBP28.18■■■□□ 2.1
CLDN11-206ENST00000486429 PPARGC1BQ86YN6 1023 aaKnown RBP28.18■■■□□ 2.1
CLDN11-206ENST00000486429 DMRT2Q9Y5R5 561 aa28.17■■■□□ 2.1
CLDN11-206ENST00000486429 PLA2R1Q13018 1463 aa28.16■■■□□ 2.1
CLDN11-206ENST00000486429 SPATA31D1Q6ZQQ2 1576 aa28.14■■■□□ 2.1
CLDN11-206ENST00000486429 PTPRTO14522 1441 aa28.13■■■□□ 2.09
CLDN11-206ENST00000486429 ERVK-7P63135 1459 aa28.13■■■□□ 2.09
CLDN11-206ENST00000486429 NLRP1Q9C000 1473 aa28.13■■■□□ 2.09
CLDN11-206ENST00000486429 KANK1Q14678 1352 aa28.12■■■□□ 2.09
CLDN11-206ENST00000486429 ANKRD50Q9ULJ7 1429 aa28.1■■■□□ 2.09
CLDN11-206ENST00000486429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.1■■■□□ 2.09
CLDN11-206ENST00000486429 VWDEQ8N2E2 1590 aa28.09■■■□□ 2.09
CLDN11-206ENST00000486429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.09■■■□□ 2.09
CLDN11-206ENST00000486429 ARHGAP31Q2M1Z3 1444 aa28.08■■■□□ 2.09
CLDN11-206ENST00000486429 LMTK2Q8IWU2 1503 aa28.08■■■□□ 2.08
CLDN11-206ENST00000486429 ILDR1Q86SU0 546 aaPredicted RBP28.07■■■□□ 2.08
CLDN11-206ENST00000486429 ROCK1Q13464 1354 aa28.06■■■□□ 2.08
CLDN11-206ENST00000486429 UGGT1Q9NYU2 1555 aa28.04■■■□□ 2.08
CLDN11-206ENST00000486429 NCKAP5LQ9HCH0 1330 aa28.02■■■□□ 2.08
CLDN11-206ENST00000486429 PKD2Q13563 968 aa28.02■■■□□ 2.08
CLDN11-206ENST00000486429 RRBP1Q9P2E9 1410 aaKnown RBP28.01■■■□□ 2.08
CLDN11-206ENST00000486429 POLR1AO95602 1720 aaPredicted RBP28.01■■■□□ 2.07
CLDN11-206ENST00000486429 EFCAB6Q5THR3 1501 aa28.01■■■□□ 2.07
CLDN11-206ENST00000486429 UNC13BO14795 1591 aa27.99■■■□□ 2.07
CLDN11-206ENST00000486429 ITGAEP38570 1179 aa27.99■■■□□ 2.07
CLDN11-206ENST00000486429 CFAP65Q6ZU64 1925 aaKnown RBP27.98■■■□□ 2.07
CLDN11-206ENST00000486429 FBXO41Q8TF61 875 aa27.96■■■□□ 2.07
CLDN11-206ENST00000486429 NEURL4Q96JN8 1562 aa27.95■■■□□ 2.07
CLDN11-206ENST00000486429 THEMISQ8N1K5 641 aaPredicted RBP27.95■■■□□ 2.06
CLDN11-206ENST00000486429 CERKQ8TCT0 537 aa27.95■■■□□ 2.06
CLDN11-206ENST00000486429 UBR1Q8IWV7 1749 aa27.93■■■□□ 2.06
CLDN11-206ENST00000486429 TET3O43151 1660 aa27.93■■■□□ 2.06
CLDN11-206ENST00000486429 LTBP4Q8N2S1 1624 aa27.9■■■□□ 2.06
CLDN11-206ENST00000486429 GCC2Q8IWJ2 1684 aa27.89■■■□□ 2.06
CLDN11-206ENST00000486429 RPRD2Q5VT52 1461 aaKnown RBP27.89■■■□□ 2.05
CLDN11-206ENST00000486429 SYNMO15061 1565 aa27.88■■■□□ 2.05
CLDN11-206ENST00000486429 PIK3C2BO00750 1634 aa27.88■■■□□ 2.05
CLDN11-206ENST00000486429 ANKLE2Q86XL3 938 aa27.87■■■□□ 2.05
CLDN11-206ENST00000486429 IQGAP3Q86VI3 1631 aa27.87■■■□□ 2.05
CLDN11-206ENST00000486429 NOS1P29475 1434 aa27.86■■■□□ 2.05
CLDN11-206ENST00000486429 MED14O60244 1454 aa27.83■■■□□ 2.05
CLDN11-206ENST00000486429 KDM5AP29375 1690 aaKnown RBP27.83■■■□□ 2.05
CLDN11-206ENST00000486429 NPHP4O75161 1426 aaPredicted RBP27.83■■■□□ 2.05
CLDN11-206ENST00000486429 IQGAP1P46940 1657 aa27.82■■■□□ 2.04
CLDN11-206ENST00000486429 ZNF335Q9H4Z2 1342 aaPredicted RBP27.82■■■□□ 2.04
CLDN11-206ENST00000486429 SLIT1O75093 1534 aa27.81■■■□□ 2.04
CLDN11-206ENST00000486429 ARHGAP23Q9P227 1491 aa27.8■■■□□ 2.04
CLDN11-206ENST00000486429 ADGRB3O60242 1522 aa27.79■■■□□ 2.04
CLDN11-206ENST00000486429 IQSEC2Q5JU85 1478 aa27.79■■■□□ 2.04
CLDN11-206ENST00000486429 E9PCH4 1651 aa27.78■■■□□ 2.04
CLDN11-206ENST00000486429 SCAF11Q99590 1463 aaKnown RBP27.78■■■□□ 2.04
CLDN11-206ENST00000486429 NUP155O75694 1391 aa27.78■■■□□ 2.04
CLDN11-206ENST00000486429 STAG3Q9UJ98 1225 aa27.76■■■□□ 2.03
CLDN11-206ENST00000486429 NAIPQ13075 1403 aa27.75■■■□□ 2.03
CLDN11-206ENST00000486429 IDI1Q13907 227 aa27.74■■■□□ 2.03
CLDN11-206ENST00000486429 SLC52A1Q9NWF4 448 aa27.73■■■□□ 2.03
CLDN11-206ENST00000486429 TMEM2Q9UHN6 1383 aa27.73■■■□□ 2.03
CLDN11-206ENST00000486429 HFM1A2PYH4 1435 aa27.71■■■□□ 2.03
CLDN11-206ENST00000486429 CPS1P31327 1500 aa27.7■■■□□ 2.02
CLDN11-206ENST00000486429 TXNDC2Q86VQ3 553 aa27.68■■■□□ 2.02
CLDN11-206ENST00000486429 EID1Q9Y6B2 187 aa27.68■■■□□ 2.02
CLDN11-206ENST00000486429 LTKP29376 864 aa27.66■■■□□ 2.02
CLDN11-206ENST00000486429 TMEM131LA2VDJ0 1609 aa27.63■■■□□ 2.01
CLDN11-206ENST00000486429 MYO5BQ9ULV0 1848 aa27.62■■■□□ 2.01
CLDN11-206ENST00000486429 SPHKAPQ2M3C7 1700 aa27.61■■■□□ 2.01
CLDN11-206ENST00000486429 ZFYVE9O95405 1425 aa27.57■■■□□ 2
CLDN11-206ENST00000486429 STRCP1A6NGW2 1772 aa27.56■■■□□ 2
CLDN11-206ENST00000486429 RIMS2Q9UQ26 1411 aa27.55■■■□□ 2
CLDN11-206ENST00000486429 CHGAP10645 457 aaKnown RBP27.53■■■□□ 2
CLDN11-206ENST00000486429 TRIM52Q96A61 297 aa27.52■■■□□ 2
CLDN11-206ENST00000486429 TRPM2O94759 1503 aa27.51■■■□□ 2
CLDN11-206ENST00000486429 UBAP1LF5GYI3 381 aa27.51■■□□□ 1.99
CLDN11-206ENST00000486429 PPP1R15AO75807 674 aaPredicted RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms