RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 DUOX2Q9NRD8 1548 aa19.1■□□□□ 0.65
PTCD1-205ENST00000485746 C3P01024 1663 aa19.08■□□□□ 0.65
PTCD1-205ENST00000485746 CLTCQ00610 1675 aaKnown RBP19.08■□□□□ 0.65
PTCD1-205ENST00000485746 NPATQ14207 1427 aa19.07■□□□□ 0.64
PTCD1-205ENST00000485746 CROCC2H7BZ55 1655 aa19.05■□□□□ 0.64
PTCD1-205ENST00000485746 NCOA1Q15788 1441 aa19.05■□□□□ 0.64
PTCD1-205ENST00000485746 ERBINQ96RT1 1412 aa19.05■□□□□ 0.64
PTCD1-205ENST00000485746 KANK1Q14678 1352 aa19.05■□□□□ 0.64
PTCD1-205ENST00000485746 KDM5DQ9BY66 1539 aa19.05■□□□□ 0.64
PTCD1-205ENST00000485746 MROH2AA6NES4 1674 aa19.05■□□□□ 0.64
PTCD1-205ENST00000485746 FBXO31Q5XUX0 539 aaPredicted RBP19.04■□□□□ 0.64
PTCD1-205ENST00000485746 PTPRKQ15262 1439 aa19.03■□□□□ 0.64
PTCD1-205ENST00000485746 PREX1Q8TCU6 1659 aa19.02■□□□□ 0.64
PTCD1-205ENST00000485746 FAM135AQ9P2D6 1515 aa19.01■□□□□ 0.63
PTCD1-205ENST00000485746 EIF2AK4Q9P2K8 1649 aaKnown RBP19■□□□□ 0.63
PTCD1-205ENST00000485746 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19■□□□□ 0.63
PTCD1-205ENST00000485746 ADGRL2O95490 1459 aa19■□□□□ 0.63
PTCD1-205ENST00000485746 SETD1BQ9UPS6 1966 aaKnown RBP18.99■□□□□ 0.63
PTCD1-205ENST00000485746 TNRQ92752 1358 aa18.99■□□□□ 0.63
PTCD1-205ENST00000485746 DMRT2Q9Y5R5 561 aa18.98■□□□□ 0.63
PTCD1-205ENST00000485746 RNF17Q9BXT8 1623 aaKnown RBP18.98■□□□□ 0.63
PTCD1-205ENST00000485746 ANKRD50Q9ULJ7 1429 aa18.98■□□□□ 0.63
PTCD1-205ENST00000485746 PZPP20742 1482 aa18.97■□□□□ 0.63
PTCD1-205ENST00000485746 ABCC3O15438 1527 aa18.95■□□□□ 0.62
PTCD1-205ENST00000485746 ROCK1Q13464 1354 aa18.95■□□□□ 0.62
PTCD1-205ENST00000485746 RRBP1Q9P2E9 1410 aaKnown RBP18.94■□□□□ 0.62
PTCD1-205ENST00000485746 MROH1Q8NDA8 1641 aa18.9■□□□□ 0.62
PTCD1-205ENST00000485746 ZC3H13Q5T200 1668 aaKnown RBP18.9■□□□□ 0.62
PTCD1-205ENST00000485746 NCKAP5LQ9HCH0 1330 aa18.9■□□□□ 0.62
PTCD1-205ENST00000485746 A2ML1A8K2U0 1454 aa18.9■□□□□ 0.62
PTCD1-205ENST00000485746 PRDM15P57071 1507 aaPredicted RBP18.9■□□□□ 0.62
PTCD1-205ENST00000485746 THEMISQ8N1K5 641 aaPredicted RBP18.89■□□□□ 0.61
PTCD1-205ENST00000485746 PKD2Q13563 968 aa18.88■□□□□ 0.61
PTCD1-205ENST00000485746 CEP170BQ9Y4F5 1589 aaPredicted RBP18.88■□□□□ 0.61
PTCD1-205ENST00000485746 MYO3AQ8NEV4 1616 aa18.88■□□□□ 0.61
PTCD1-205ENST00000485746 CEP152O94986 1710 aa18.87■□□□□ 0.61
PTCD1-205ENST00000485746 CAMSAP1Q5T5Y3 1602 aa18.87■□□□□ 0.61
PTCD1-205ENST00000485746 STAG3Q9UJ98 1225 aa18.87■□□□□ 0.61
PTCD1-205ENST00000485746 ERVK-7P63135 1459 aa18.86■□□□□ 0.61
PTCD1-205ENST00000485746 NLRP1Q9C000 1473 aa18.86■□□□□ 0.61
PTCD1-205ENST00000485746 ARHGAP31Q2M1Z3 1444 aa18.86■□□□□ 0.61
PTCD1-205ENST00000485746 ANKLE2Q86XL3 938 aa18.84■□□□□ 0.61
PTCD1-205ENST00000485746 DEPDC5O75140 1603 aa18.84■□□□□ 0.61
PTCD1-205ENST00000485746 NUP155O75694 1391 aa18.83■□□□□ 0.61
PTCD1-205ENST00000485746 PTPRTO14522 1441 aa18.83■□□□□ 0.6
PTCD1-205ENST00000485746 SPATA31D1Q6ZQQ2 1576 aa18.81■□□□□ 0.6
PTCD1-205ENST00000485746 LMTK2Q8IWU2 1503 aa18.81■□□□□ 0.6
PTCD1-205ENST00000485746 PLA2R1Q13018 1463 aa18.81■□□□□ 0.6
PTCD1-205ENST00000485746 ZNF142P52746 1687 aaPredicted RBP18.81■□□□□ 0.6
PTCD1-205ENST00000485746 UGGT1Q9NYU2 1555 aa18.81■□□□□ 0.6
PTCD1-205ENST00000485746 TRIM52Q96A61 297 aa18.8■□□□□ 0.6
PTCD1-205ENST00000485746 VWDEQ8N2E2 1590 aa18.79■□□□□ 0.6
PTCD1-205ENST00000485746 STRCQ7RTU9 1775 aa18.78■□□□□ 0.6
PTCD1-205ENST00000485746 IDI1Q13907 227 aa18.77■□□□□ 0.6
PTCD1-205ENST00000485746 SLC52A1Q9NWF4 448 aa18.77■□□□□ 0.6
PTCD1-205ENST00000485746 CERKQ8TCT0 537 aa18.76■□□□□ 0.59
PTCD1-205ENST00000485746 EID1Q9Y6B2 187 aa18.76■□□□□ 0.59
PTCD1-205ENST00000485746 CFAP65Q6ZU64 1925 aaKnown RBP18.76■□□□□ 0.59
PTCD1-205ENST00000485746 NAIPQ13075 1403 aa18.75■□□□□ 0.59
PTCD1-205ENST00000485746 EFCAB6Q5THR3 1501 aa18.75■□□□□ 0.59
PTCD1-205ENST00000485746 CHGAP10645 457 aaKnown RBP18.75■□□□□ 0.59
PTCD1-205ENST00000485746 UNC13BO14795 1591 aa18.74■□□□□ 0.59
PTCD1-205ENST00000485746 ILDR1Q86SU0 546 aaPredicted RBP18.74■□□□□ 0.59
PTCD1-205ENST00000485746 TXNDC2Q86VQ3 553 aa18.74■□□□□ 0.59
PTCD1-205ENST00000485746 RPRD2Q5VT52 1461 aaKnown RBP18.73■□□□□ 0.59
PTCD1-205ENST00000485746 HFM1A2PYH4 1435 aa18.72■□□□□ 0.59
PTCD1-205ENST00000485746 NOS1P29475 1434 aa18.72■□□□□ 0.59
PTCD1-205ENST00000485746 FBXO41Q8TF61 875 aa18.7■□□□□ 0.58
PTCD1-205ENST00000485746 TET3O43151 1660 aa18.69■□□□□ 0.58
PTCD1-205ENST00000485746 ZNF335Q9H4Z2 1342 aaPredicted RBP18.69■□□□□ 0.58
PTCD1-205ENST00000485746 NPHP4O75161 1426 aaPredicted RBP18.68■□□□□ 0.58
PTCD1-205ENST00000485746 BCANQ96GW7 911 aa18.68■□□□□ 0.58
PTCD1-205ENST00000485746 IQGAP3Q86VI3 1631 aa18.67■□□□□ 0.58
PTCD1-205ENST00000485746 LTKP29376 864 aa18.67■□□□□ 0.58
PTCD1-205ENST00000485746 HDGFP51858 240 aaKnown RBP18.67■□□□□ 0.58
PTCD1-205ENST00000485746 SLC4A1APQ9BWU0 796 aaKnown RBP18.67■□□□□ 0.58
PTCD1-205ENST00000485746 TMEM2Q9UHN6 1383 aa18.66■□□□□ 0.58
PTCD1-205ENST00000485746 SYNMO15061 1565 aa18.65■□□□□ 0.58
PTCD1-205ENST00000485746 PIK3C2BO00750 1634 aa18.65■□□□□ 0.58
PTCD1-205ENST00000485746 PPP1R15AO75807 674 aaPredicted RBP18.65■□□□□ 0.58
PTCD1-205ENST00000485746 SCAF11Q99590 1463 aaKnown RBP18.65■□□□□ 0.58
PTCD1-205ENST00000485746 GCC2Q8IWJ2 1684 aa18.64■□□□□ 0.57
PTCD1-205ENST00000485746 UBR1Q8IWV7 1749 aa18.63■□□□□ 0.57
PTCD1-205ENST00000485746 SENP3Q9H4L4 574 aaPredicted RBP18.62■□□□□ 0.57
PTCD1-205ENST00000485746 MED14O60244 1454 aa18.62■□□□□ 0.57
PTCD1-205ENST00000485746 E9PCH4 1651 aa18.61■□□□□ 0.57
PTCD1-205ENST00000485746 SLIT1O75093 1534 aa18.61■□□□□ 0.57
PTCD1-205ENST00000485746 POLR1AO95602 1720 aaPredicted RBP18.6■□□□□ 0.57
PTCD1-205ENST00000485746 NEURL4Q96JN8 1562 aa18.6■□□□□ 0.57
PTCD1-205ENST00000485746 ADGRB3O60242 1522 aa18.6■□□□□ 0.57
PTCD1-205ENST00000485746 ARHGAP23Q9P227 1491 aa18.6■□□□□ 0.57
PTCD1-205ENST00000485746 ACIN1Q9UKV3 1341 aaKnown RBP18.6■□□□□ 0.57
PTCD1-205ENST00000485746 ZNF326Q5BKZ1 582 aaKnown RBP18.6■□□□□ 0.57
PTCD1-205ENST00000485746 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.6■□□□□ 0.57
PTCD1-205ENST00000485746 SETD5Q9C0A6 1442 aa18.59■□□□□ 0.57
PTCD1-205ENST00000485746 LTBP4Q8N2S1 1624 aa18.57■□□□□ 0.56
PTCD1-205ENST00000485746 NUTM2DQ5VT03 806 aaPredicted RBP18.57■□□□□ 0.56
PTCD1-205ENST00000485746 RIMS2Q9UQ26 1411 aa18.57■□□□□ 0.56
PTCD1-205ENST00000485746 SLC26A8Q96RN1 970 aa18.56■□□□□ 0.56
PTCD1-205ENST00000485746 MPHOSPH9Q99550 1183 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms