RNA–Protein interactions for RNA: ENST00000485565.6

SPIN1-205, Transcript of spindlin 1, humanhuman

TSL 3

Gene SPIN1, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-205ENST00000485565 PTPN23Q9H3S7 1636 aa28.18■■■□□ 2.1
SPIN1-205ENST00000485565 CROCC2H7BZ55 1655 aa28.17■■■□□ 2.1
SPIN1-205ENST00000485565 KDM5DQ9BY66 1539 aa28.16■■■□□ 2.1
SPIN1-205ENST00000485565 CAMSAP1Q5T5Y3 1602 aa28.14■■■□□ 2.1
SPIN1-205ENST00000485565 CEP170BQ9Y4F5 1589 aaPredicted RBP28.13■■■□□ 2.09
SPIN1-205ENST00000485565 FAM135AQ9P2D6 1515 aa28.13■■■□□ 2.09
SPIN1-205ENST00000485565 RNF17Q9BXT8 1623 aaKnown RBP28.12■■■□□ 2.09
SPIN1-205ENST00000485565 EIF2AK4Q9P2K8 1649 aaKnown RBP28.1■■■□□ 2.09
SPIN1-205ENST00000485565 NCKAP5LQ9HCH0 1330 aa28.08■■■□□ 2.09
SPIN1-205ENST00000485565 FGD6Q6ZV73 1430 aa28.08■■■□□ 2.09
SPIN1-205ENST00000485565 WASHC2CQ9Y4E1 1318 aa28.07■■■□□ 2.08
SPIN1-205ENST00000485565 DNMT1P26358 1616 aaKnown RBP28.07■■■□□ 2.08
SPIN1-205ENST00000485565 PZPP20742 1482 aa28.06■■■□□ 2.08
SPIN1-205ENST00000485565 LTBP4Q8N2S1 1624 aa28.06■■■□□ 2.08
SPIN1-205ENST00000485565 ABCC5O15440 1437 aa28.05■■■□□ 2.08
SPIN1-205ENST00000485565 ZC3H13Q5T200 1668 aaKnown RBP28.04■■■□□ 2.08
SPIN1-205ENST00000485565 MROH1Q8NDA8 1641 aa28.04■■■□□ 2.08
SPIN1-205ENST00000485565 PLA2R1Q13018 1463 aa28.04■■■□□ 2.08
SPIN1-205ENST00000485565 TCOF1Q13428 1488 aaKnown RBP28.04■■■□□ 2.08
SPIN1-205ENST00000485565 SHANK2Q9UPX8 1470 aa28.04■■■□□ 2.08
SPIN1-205ENST00000485565 CEP152O94986 1710 aa28.04■■■□□ 2.08
SPIN1-205ENST00000485565 DUOX2Q9NRD8 1548 aa28.03■■■□□ 2.08
SPIN1-205ENST00000485565 FBXO31Q5XUX0 539 aaPredicted RBP28.03■■■□□ 2.08
SPIN1-205ENST00000485565 PKD2Q13563 968 aa28.02■■■□□ 2.08
SPIN1-205ENST00000485565 DAPK1P53355 1430 aa28.01■■■□□ 2.08
SPIN1-205ENST00000485565 A2ML1A8K2U0 1454 aa28.01■■■□□ 2.07
SPIN1-205ENST00000485565 ABCC3O15438 1527 aa28■■■□□ 2.07
SPIN1-205ENST00000485565 TNRQ92752 1358 aa27.99■■■□□ 2.07
SPIN1-205ENST00000485565 CFAP65Q6ZU64 1925 aaKnown RBP27.98■■■□□ 2.07
SPIN1-205ENST00000485565 KIF15Q9NS87 1388 aa27.98■■■□□ 2.07
SPIN1-205ENST00000485565 ZNF335Q9H4Z2 1342 aaPredicted RBP27.95■■■□□ 2.07
SPIN1-205ENST00000485565 IQSEC2Q5JU85 1478 aa27.95■■■□□ 2.06
SPIN1-205ENST00000485565 RRP7BPQ9NSQ0 103 aa27.94■■■□□ 2.06
SPIN1-205ENST00000485565 POLR1AO95602 1720 aaPredicted RBP27.94■■■□□ 2.06
SPIN1-205ENST00000485565 ERBINQ96RT1 1412 aa27.92■■■□□ 2.06
SPIN1-205ENST00000485565 PRDM15P57071 1507 aaPredicted RBP27.91■■■□□ 2.06
SPIN1-205ENST00000485565 DEPDC5O75140 1603 aa27.9■■■□□ 2.06
SPIN1-205ENST00000485565 CHIC2Q9UKJ5 165 aa27.9■■■□□ 2.06
SPIN1-205ENST00000485565 SPATA31D1Q6ZQQ2 1576 aa27.89■■■□□ 2.05
SPIN1-205ENST00000485565 NLRP1Q9C000 1473 aa27.88■■■□□ 2.05
SPIN1-205ENST00000485565 ERVK-7P63135 1459 aa27.86■■■□□ 2.05
SPIN1-205ENST00000485565 UGGT1Q9NYU2 1555 aa27.86■■■□□ 2.05
SPIN1-205ENST00000485565 ANKRD30AQ9BXX3 1397 aa27.86■■■□□ 2.05
SPIN1-205ENST00000485565 FAM50AQ14320 339 aaKnown RBP27.85■■■□□ 2.05
SPIN1-205ENST00000485565 NEURL4Q96JN8 1562 aa27.85■■■□□ 2.05
SPIN1-205ENST00000485565 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.81■■■□□ 2.04
SPIN1-205ENST00000485565 ADGRL2O95490 1459 aa27.81■■■□□ 2.04
SPIN1-205ENST00000485565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.8■■■□□ 2.049e-10■■■■■ 31.1
SPIN1-205ENST00000485565 THEMISQ8N1K5 641 aaPredicted RBP27.79■■■□□ 2.04
SPIN1-205ENST00000485565 ANKLE2Q86XL3 938 aa27.78■■■□□ 2.04
SPIN1-205ENST00000485565 UBAP1LF5GYI3 381 aa27.77■■■□□ 2.04
SPIN1-205ENST00000485565 UBR1Q8IWV7 1749 aa27.77■■■□□ 2.04
SPIN1-205ENST00000485565 ARHGAP31Q2M1Z3 1444 aa27.75■■■□□ 2.03
SPIN1-205ENST00000485565 DISP3Q9P2K9 1392 aa27.75■■■□□ 2.03
SPIN1-205ENST00000485565 KANK1Q14678 1352 aa27.74■■■□□ 2.03
SPIN1-205ENST00000485565 VWDEQ8N2E2 1590 aa27.74■■■□□ 2.03
SPIN1-205ENST00000485565 PPARGC1BQ86YN6 1023 aaKnown RBP27.7■■■□□ 2.02
SPIN1-205ENST00000485565 IQGAP1P46940 1657 aa27.7■■■□□ 2.02
SPIN1-205ENST00000485565 LMTK2Q8IWU2 1503 aa27.7■■■□□ 2.02
SPIN1-205ENST00000485565 NPHP4O75161 1426 aaPredicted RBP27.68■■■□□ 2.02
SPIN1-205ENST00000485565 MED14O60244 1454 aa27.68■■■□□ 2.02
SPIN1-205ENST00000485565 ANKRD50Q9ULJ7 1429 aa27.67■■■□□ 2.02
SPIN1-205ENST00000485565 PIK3C2BO00750 1634 aa27.67■■■□□ 2.02
SPIN1-205ENST00000485565 CPS1P31327 1500 aa27.67■■■□□ 2.02
SPIN1-205ENST00000485565 EFCAB6Q5THR3 1501 aa27.66■■■□□ 2.02
SPIN1-205ENST00000485565 SYNMO15061 1565 aa27.62■■■□□ 2.01
SPIN1-205ENST00000485565 ILDR2Q71H61 639 aa27.62■■■□□ 2.01
SPIN1-205ENST00000485565 UNC13BO14795 1591 aa27.6■■■□□ 2.01
SPIN1-205ENST00000485565 SLIT1O75093 1534 aa27.58■■■□□ 2.01
SPIN1-205ENST00000485565 TET3O43151 1660 aa27.58■■■□□ 2.01
SPIN1-205ENST00000485565 KDM5AP29375 1690 aaKnown RBP27.58■■■□□ 2.01
SPIN1-205ENST00000485565 STRCP1A6NGW2 1772 aa27.58■■■□□ 2
SPIN1-205ENST00000485565 ARHGAP23Q9P227 1491 aa27.57■■■□□ 2
SPIN1-205ENST00000485565 SCAF11Q99590 1463 aaKnown RBP27.57■■■□□ 2
SPIN1-205ENST00000485565 GCC2Q8IWJ2 1684 aa27.56■■■□□ 2
SPIN1-205ENST00000485565 TOM1O60784 492 aa27.56■■■□□ 2
SPIN1-205ENST00000485565 ROCK1Q13464 1354 aa27.55■■■□□ 2
SPIN1-205ENST00000485565 NOS1P29475 1434 aa27.55■■■□□ 2
SPIN1-205ENST00000485565 ITGAEP38570 1179 aa27.54■■■□□ 2
SPIN1-205ENST00000485565 PIP4K2BP78356 416 aa27.54■■■□□ 2
SPIN1-205ENST00000485565 SCAF1Q9H7N4 1312 aaKnown RBP27.54■■■□□ 2
SPIN1-205ENST00000485565 LTKP29376 864 aa27.52■■■□□ 2
SPIN1-205ENST00000485565 IDI1Q13907 227 aa27.52■■■□□ 2
SPIN1-205ENST00000485565 RPRD2Q5VT52 1461 aaKnown RBP27.51■■□□□ 1.99
SPIN1-205ENST00000485565 MYO5BQ9ULV0 1848 aa27.51■■□□□ 1.99
SPIN1-205ENST00000485565 TXNDC2Q86VQ3 553 aa27.5■■□□□ 1.99
SPIN1-205ENST00000485565 STAG3Q9UJ98 1225 aa27.5■■□□□ 1.99
SPIN1-205ENST00000485565 ADGRB3O60242 1522 aa27.49■■□□□ 1.99
SPIN1-205ENST00000485565 E9PCH4 1651 aa27.49■■□□□ 1.99
SPIN1-205ENST00000485565 IQGAP3Q86VI3 1631 aa27.49■■□□□ 1.99
SPIN1-205ENST00000485565 TMEM2Q9UHN6 1383 aa27.48■■□□□ 1.99
SPIN1-205ENST00000485565 HSPA1LP34931 641 aa27.48■■□□□ 1.99
SPIN1-205ENST00000485565 EID1Q9Y6B2 187 aa27.45■■□□□ 1.98
SPIN1-205ENST00000485565 LRRC7Q96NW7 1537 aa27.45■■□□□ 1.98
SPIN1-205ENST00000485565 SOCS7O14512 581 aa27.44■■□□□ 1.98
SPIN1-205ENST00000485565 RRBP1Q9P2E9 1410 aaKnown RBP27.41■■□□□ 1.98
SPIN1-205ENST00000485565 ALKQ9UM73 1620 aa27.41■■□□□ 1.98
SPIN1-205ENST00000485565 SLC52A1Q9NWF4 448 aa27.41■■□□□ 1.98
SPIN1-205ENST00000485565 TMEM131LA2VDJ0 1609 aa27.38■■□□□ 1.97
SPIN1-205ENST00000485565 XIRP1Q702N8 1843 aaKnown RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms