RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 ZNF142P52746 1687 aaPredicted RBP24.81■■□□□ 1.56
SIK3-211ENST00000485363 NCOA1Q15788 1441 aa24.81■■□□□ 1.56
SIK3-211ENST00000485363 PTPRTO14522 1441 aa24.8■■□□□ 1.56
SIK3-211ENST00000485363 CAMSAP1Q5T5Y3 1602 aa24.8■■□□□ 1.56
SIK3-211ENST00000485363 CERKQ8TCT0 537 aa24.79■■□□□ 1.56
SIK3-211ENST00000485363 CEP170BQ9Y4F5 1589 aaPredicted RBP24.79■■□□□ 1.56
SIK3-211ENST00000485363 EIF2AK4Q9P2K8 1649 aaKnown RBP24.78■■□□□ 1.56
SIK3-211ENST00000485363 RNF17Q9BXT8 1623 aaKnown RBP24.77■■□□□ 1.56
SIK3-211ENST00000485363 CROCC2H7BZ55 1655 aa24.77■■□□□ 1.56
SIK3-211ENST00000485363 FGD6Q6ZV73 1430 aa24.77■■□□□ 1.56
SIK3-211ENST00000485363 PZPP20742 1482 aa24.76■■□□□ 1.55
SIK3-211ENST00000485363 SHANK2Q9UPX8 1470 aa24.76■■□□□ 1.55
SIK3-211ENST00000485363 ABCC5O15440 1437 aa24.75■■□□□ 1.55
SIK3-211ENST00000485363 TCOF1Q13428 1488 aaKnown RBP24.75■■□□□ 1.55
SIK3-211ENST00000485363 DUOX2Q9NRD8 1548 aa24.75■■□□□ 1.55
SIK3-211ENST00000485363 FBXO31Q5XUX0 539 aaPredicted RBP24.73■■□□□ 1.55
SIK3-211ENST00000485363 DNMT1P26358 1616 aaKnown RBP24.72■■□□□ 1.55
SIK3-211ENST00000485363 PLA2R1Q13018 1463 aa24.72■■□□□ 1.55
SIK3-211ENST00000485363 TNRQ92752 1358 aa24.72■■□□□ 1.55
SIK3-211ENST00000485363 ZC3H13Q5T200 1668 aaKnown RBP24.72■■□□□ 1.55
SIK3-211ENST00000485363 A2ML1A8K2U0 1454 aa24.71■■□□□ 1.55
SIK3-211ENST00000485363 DAPK1P53355 1430 aa24.71■■□□□ 1.55
SIK3-211ENST00000485363 KIF15Q9NS87 1388 aa24.7■■□□□ 1.55
SIK3-211ENST00000485363 NCKAP5LQ9HCH0 1330 aa24.69■■□□□ 1.54
SIK3-211ENST00000485363 ABCC3O15438 1527 aa24.68■■□□□ 1.54
SIK3-211ENST00000485363 PKD2Q13563 968 aa24.68■■□□□ 1.54
SIK3-211ENST00000485363 MROH1Q8NDA8 1641 aa24.68■■□□□ 1.54
SIK3-211ENST00000485363 RRP7BPQ9NSQ0 103 aa24.67■■□□□ 1.54
SIK3-211ENST00000485363 ERBINQ96RT1 1412 aa24.67■■□□□ 1.54
SIK3-211ENST00000485363 ANKRD30AQ9BXX3 1397 aa24.63■■□□□ 1.53
SIK3-211ENST00000485363 CEP152O94986 1710 aa24.63■■□□□ 1.53
SIK3-211ENST00000485363 NLRP1Q9C000 1473 aa24.63■■□□□ 1.53
SIK3-211ENST00000485363 CHIC2Q9UKJ5 165 aa24.61■■□□□ 1.53
SIK3-211ENST00000485363 LTBP4Q8N2S1 1624 aa24.61■■□□□ 1.53
SIK3-211ENST00000485363 PRDM15P57071 1507 aaPredicted RBP24.61■■□□□ 1.53
SIK3-211ENST00000485363 SPATA31D1Q6ZQQ2 1576 aa24.59■■□□□ 1.53
SIK3-211ENST00000485363 FAM50AQ14320 339 aaKnown RBP24.58■■□□□ 1.53
SIK3-211ENST00000485363 THEMISQ8N1K5 641 aaPredicted RBP24.57■■□□□ 1.52
SIK3-211ENST00000485363 UGGT1Q9NYU2 1555 aa24.57■■□□□ 1.52
SIK3-211ENST00000485363 POLR1AO95602 1720 aaPredicted RBP24.57■■□□□ 1.52
SIK3-211ENST00000485363 ERVK-7P63135 1459 aa24.57■■□□□ 1.52
SIK3-211ENST00000485363 DEPDC5O75140 1603 aa24.57■■□□□ 1.52
SIK3-211ENST00000485363 CFAP65Q6ZU64 1925 aaKnown RBP24.56■■□□□ 1.52
SIK3-211ENST00000485363 ADGRL2O95490 1459 aa24.54■■□□□ 1.52
SIK3-211ENST00000485363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.54■■□□□ 1.525e-8■■□□□ 12.1
SIK3-211ENST00000485363 KANK1Q14678 1352 aa24.54■■□□□ 1.52
SIK3-211ENST00000485363 ZNF335Q9H4Z2 1342 aaPredicted RBP24.53■■□□□ 1.52
SIK3-211ENST00000485363 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.53■■□□□ 1.529e-14■■■■□ 20.6
SIK3-211ENST00000485363 ARHGAP31Q2M1Z3 1444 aa24.52■■□□□ 1.52
SIK3-211ENST00000485363 IQSEC2Q5JU85 1478 aa24.52■■□□□ 1.52
SIK3-211ENST00000485363 ANKLE2Q86XL3 938 aa24.52■■□□□ 1.52
SIK3-211ENST00000485363 NEURL4Q96JN8 1562 aa24.5■■□□□ 1.51
SIK3-211ENST00000485363 LMTK2Q8IWU2 1503 aa24.46■■□□□ 1.51
SIK3-211ENST00000485363 VWDEQ8N2E2 1590 aa24.46■■□□□ 1.51
SIK3-211ENST00000485363 UBR1Q8IWV7 1749 aa24.44■■□□□ 1.5
SIK3-211ENST00000485363 ANKRD50Q9ULJ7 1429 aa24.44■■□□□ 1.5
SIK3-211ENST00000485363 MED14O60244 1454 aa24.43■■□□□ 1.5
SIK3-211ENST00000485363 NPHP4O75161 1426 aaPredicted RBP24.43■■□□□ 1.5
SIK3-211ENST00000485363 IQGAP1P46940 1657 aa24.39■■□□□ 1.49
SIK3-211ENST00000485363 PPARGC1BQ86YN6 1023 aaKnown RBP24.38■■□□□ 1.49
SIK3-211ENST00000485363 EFCAB6Q5THR3 1501 aa24.37■■□□□ 1.49
SIK3-211ENST00000485363 CPS1P31327 1500 aa24.36■■□□□ 1.49
SIK3-211ENST00000485363 ROCK1Q13464 1354 aa24.36■■□□□ 1.49
SIK3-211ENST00000485363 PIK3C2BO00750 1634 aa24.35■■□□□ 1.49
SIK3-211ENST00000485363 SLIT1O75093 1534 aa24.34■■□□□ 1.49
SIK3-211ENST00000485363 SCAF11Q99590 1463 aaKnown RBP24.33■■□□□ 1.49
SIK3-211ENST00000485363 STAG3Q9UJ98 1225 aa24.33■■□□□ 1.49
SIK3-211ENST00000485363 ARHGAP23Q9P227 1491 aa24.32■■□□□ 1.48
SIK3-211ENST00000485363 UBAP1LF5GYI3 381 aa24.32■■□□□ 1.48
SIK3-211ENST00000485363 KDM5AP29375 1690 aaKnown RBP24.31■■□□□ 1.48
SIK3-211ENST00000485363 SYNMO15061 1565 aa24.31■■□□□ 1.48
SIK3-211ENST00000485363 NOS1P29475 1434 aa24.31■■□□□ 1.48
SIK3-211ENST00000485363 RPRD2Q5VT52 1461 aaKnown RBP24.31■■□□□ 1.48
SIK3-211ENST00000485363 UNC13BO14795 1591 aa24.3■■□□□ 1.48
SIK3-211ENST00000485363 ITGAEP38570 1179 aa24.3■■□□□ 1.48
SIK3-211ENST00000485363 IDI1Q13907 227 aa24.3■■□□□ 1.48
SIK3-211ENST00000485363 TXNDC2Q86VQ3 553 aa24.3■■□□□ 1.48
SIK3-211ENST00000485363 EID1Q9Y6B2 187 aa24.3■■□□□ 1.48
SIK3-211ENST00000485363 TET3O43151 1660 aa24.3■■□□□ 1.48
SIK3-211ENST00000485363 LTKP29376 864 aa24.28■■□□□ 1.48
SIK3-211ENST00000485363 TMEM2Q9UHN6 1383 aa24.28■■□□□ 1.48
SIK3-211ENST00000485363 GCC2Q8IWJ2 1684 aa24.27■■□□□ 1.48
SIK3-211ENST00000485363 SLC52A1Q9NWF4 448 aa24.26■■□□□ 1.47
SIK3-211ENST00000485363 ADGRB3O60242 1522 aa24.23■■□□□ 1.47
SIK3-211ENST00000485363 STRCP1A6NGW2 1772 aa24.22■■□□□ 1.47
SIK3-211ENST00000485363 IQGAP3Q86VI3 1631 aa24.21■■□□□ 1.47
SIK3-211ENST00000485363 TOM1O60784 492 aa24.21■■□□□ 1.47
SIK3-211ENST00000485363 RRBP1Q9P2E9 1410 aaKnown RBP24.19■■□□□ 1.46
SIK3-211ENST00000485363 E9PCH4 1651 aa24.18■■□□□ 1.46
SIK3-211ENST00000485363 NUP155O75694 1391 aa24.17■■□□□ 1.46
SIK3-211ENST00000485363 LRRC7Q96NW7 1537 aa24.16■■□□□ 1.46
SIK3-211ENST00000485363 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.46
SIK3-211ENST00000485363 PIP4K2BP78356 416 aa24.14■■□□□ 1.45
SIK3-211ENST00000485363 MYO5BQ9ULV0 1848 aa24.14■■□□□ 1.45
SIK3-211ENST00000485363 TMEM131LA2VDJ0 1609 aa24.11■■□□□ 1.45
SIK3-211ENST00000485363 HDGFP51858 240 aaKnown RBP24.1■■□□□ 1.45
SIK3-211ENST00000485363 DISP3Q9P2K9 1392 aa24.08■■□□□ 1.45
SIK3-211ENST00000485363 CHGAP10645 457 aaKnown RBP24.08■■□□□ 1.45
SIK3-211ENST00000485363 BCANQ96GW7 911 aa24.08■■□□□ 1.45
SIK3-211ENST00000485363 SLC26A8Q96RN1 970 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms