RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 SLC4A10Q6U841 1118 aa20.06■□□□□ 0.8
PCDH17-202ENST00000484979 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.05■□□□□ 0.8
PCDH17-202ENST00000484979 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
PCDH17-202ENST00000484979 MYOM3Q5VTT5 1437 aa20.04■□□□□ 0.8
PCDH17-202ENST00000484979 PANK3Q9H999 370 aa20.04■□□□□ 0.8
PCDH17-202ENST00000484979 GNL2Q13823 731 aaKnown RBP20.04■□□□□ 0.8
PCDH17-202ENST00000484979 CENPJQ9HC77 1338 aaPredicted RBP20.03■□□□□ 0.8
PCDH17-202ENST00000484979 NOP58Q9Y2X3 529 aaKnown RBP20.03■□□□□ 0.8
PCDH17-202ENST00000484979 MINK1Q8N4C8 1332 aaPredicted RBP20.03■□□□□ 0.8
PCDH17-202ENST00000484979 TEFQ10587 303 aa20.02■□□□□ 0.8
PCDH17-202ENST00000484979 KIF15Q9NS87 1388 aa20.02■□□□□ 0.8
PCDH17-202ENST00000484979 EVA1CP58658 441 aa20.02■□□□□ 0.8
PCDH17-202ENST00000484979 CLUAP1Q96AJ1 413 aa20.02■□□□□ 0.8
PCDH17-202ENST00000484979 CCDC146Q8IYE0 955 aa20.02■□□□□ 0.79
PCDH17-202ENST00000484979 RUSC2Q8N2Y8 1516 aa20.01■□□□□ 0.79
PCDH17-202ENST00000484979 C1orf141Q5JVX7 400 aa20■□□□□ 0.79
PCDH17-202ENST00000484979 G3V3G9 751 aa20■□□□□ 0.79
PCDH17-202ENST00000484979 DCAF8Q5TAQ9 597 aa20■□□□□ 0.79
PCDH17-202ENST00000484979 MYBBP1AQ9BQG0 1328 aaKnown RBP19.99■□□□□ 0.79
PCDH17-202ENST00000484979 RAD54L2Q9Y4B4 1467 aa19.98■□□□□ 0.79
PCDH17-202ENST00000484979 TCERG1O14776 1098 aaKnown RBP19.97■□□□□ 0.79
PCDH17-202ENST00000484979 FRAT2O75474 233 aaPredicted RBP19.96■□□□□ 0.79
PCDH17-202ENST00000484979 PSME1Q06323 249 aa19.96■□□□□ 0.79
PCDH17-202ENST00000484979 HTATSF1O43719 755 aaKnown RBP19.95■□□□□ 0.78
PCDH17-202ENST00000484979 TRIM6-TRIM34B2RNG4 842 aa19.95■□□□□ 0.78
PCDH17-202ENST00000484979 AQRO60306 1485 aaKnown RBP eCLIP19.94■□□□□ 0.78
PCDH17-202ENST00000484979 NGEFQ8N5V2 710 aa19.93■□□□□ 0.78
PCDH17-202ENST00000484979 DHX57Q6P158 1386 aaKnown RBP19.92■□□□□ 0.78
PCDH17-202ENST00000484979 USP47Q96K76 1375 aa19.92■□□□□ 0.78
PCDH17-202ENST00000484979 CCDC34Q96HJ3 373 aa19.91■□□□□ 0.78
PCDH17-202ENST00000484979 RRP7AQ9Y3A4 280 aaKnown RBP19.91■□□□□ 0.78
PCDH17-202ENST00000484979 TTC5Q8N0Z6 440 aa19.91■□□□□ 0.78
PCDH17-202ENST00000484979 ELL2O00472 640 aaPredicted RBP19.9■□□□□ 0.78
PCDH17-202ENST00000484979 AEBP2Q6ZN18 517 aaPredicted RBP19.9■□□□□ 0.78
PCDH17-202ENST00000484979 NEXNQ0ZGT2 675 aa19.89■□□□□ 0.78
PCDH17-202ENST00000484979 ATF3P18847 181 aa19.89■□□□□ 0.77
PCDH17-202ENST00000484979 GBP4Q96PP9 640 aa19.89■□□□□ 0.77
PCDH17-202ENST00000484979 ZNF644Q9H582 1327 aaPredicted RBP19.89■□□□□ 0.77
PCDH17-202ENST00000484979 CLSTN1O94985 981 aa19.88■□□□□ 0.77
PCDH17-202ENST00000484979 GRIN2BQ13224 1484 aa19.88■□□□□ 0.77
PCDH17-202ENST00000484979 DIAPH1O60610 1272 aaKnown RBP19.88■□□□□ 0.77
PCDH17-202ENST00000484979 PRKRIP1Q9H875 184 aaPredicted RBP19.88■□□□□ 0.77
PCDH17-202ENST00000484979 SPRYD3Q8NCJ5 442 aa19.88■□□□□ 0.77
PCDH17-202ENST00000484979 E9PSI1 815 aa19.87■□□□□ 0.77
PCDH17-202ENST00000484979 AFAP1Q8N556 730 aa19.86■□□□□ 0.77
PCDH17-202ENST00000484979 PTMSP20962 102 aa19.84■□□□□ 0.77
PCDH17-202ENST00000484979 FGD6Q6ZV73 1430 aa19.84■□□□□ 0.77
PCDH17-202ENST00000484979 ANKRD50Q9ULJ7 1429 aa19.84■□□□□ 0.77
PCDH17-202ENST00000484979 KIF3AQ9Y496 699 aa19.84■□□□□ 0.77
PCDH17-202ENST00000484979 ZKSCAN2Q63HK3 967 aa19.83■□□□□ 0.77
PCDH17-202ENST00000484979 TOMM22Q9NS69 142 aa19.83■□□□□ 0.77
PCDH17-202ENST00000484979 RAPGEF4Q8WZA2 1011 aa19.82■□□□□ 0.76
PCDH17-202ENST00000484979 MFAP1P55081 439 aaKnown RBP19.82■□□□□ 0.76
PCDH17-202ENST00000484979 APAF1O14727 1248 aa19.82■□□□□ 0.76
PCDH17-202ENST00000484979 L1TD1Q5T7N2 865 aaKnown RBP19.81■□□□□ 0.76
PCDH17-202ENST00000484979 LRRFIP1Q32MZ4 808 aaKnown RBP19.8■□□□□ 0.76
PCDH17-202ENST00000484979 MSH5O43196 834 aa19.8■□□□□ 0.76
PCDH17-202ENST00000484979 DDX58O95786 925 aaKnown RBP19.8■□□□□ 0.76
PCDH17-202ENST00000484979 CHAF1AQ13111 956 aaPredicted RBP19.8■□□□□ 0.76
PCDH17-202ENST00000484979 DRC7Q8IY82 874 aa19.8■□□□□ 0.76
PCDH17-202ENST00000484979 HSP90B1P14625 803 aaKnown RBP19.79■□□□□ 0.76
PCDH17-202ENST00000484979 C9orf78Q9NZ63 289 aaPredicted RBP19.79■□□□□ 0.76
PCDH17-202ENST00000484979 SYAP1Q96A49 352 aaPredicted RBP19.79■□□□□ 0.76
PCDH17-202ENST00000484979 BCL2L13Q9BXK5 485 aa19.78■□□□□ 0.76
PCDH17-202ENST00000484979 SYNJ2O15056 1496 aa19.78■□□□□ 0.76
PCDH17-202ENST00000484979 EIF2S2P20042 333 aaKnown RBP19.78■□□□□ 0.76
PCDH17-202ENST00000484979 SYTL4Q96C24 671 aaPredicted RBP19.78■□□□□ 0.76
PCDH17-202ENST00000484979 CHMP4CQ96CF2 233 aa19.78■□□□□ 0.76
PCDH17-202ENST00000484979 SLKQ9H2G2 1235 aaPredicted RBP19.77■□□□□ 0.76
PCDH17-202ENST00000484979 API5Q9BZZ5 524 aaKnown RBP19.77■□□□□ 0.76
PCDH17-202ENST00000484979 PRG4Q92954 1404 aaPredicted RBP19.76■□□□□ 0.75
PCDH17-202ENST00000484979 TXNDC2Q86VQ3 553 aa19.76■□□□□ 0.75
PCDH17-202ENST00000484979 CUX1P39880 1505 aa19.76■□□□□ 0.75
PCDH17-202ENST00000484979 RIPK4P57078 832 aa19.76■□□□□ 0.75
PCDH17-202ENST00000484979 ST18O60284 1047 aa19.75■□□□□ 0.75
PCDH17-202ENST00000484979 MEX3CQ5U5Q3 659 aaKnown RBP19.75■□□□□ 0.75
PCDH17-202ENST00000484979 NLRP6P59044 892 aa19.75■□□□□ 0.75
PCDH17-202ENST00000484979 RBM19Q9Y4C8 960 aaKnown RBP19.75■□□□□ 0.75
PCDH17-202ENST00000484979 MIA2Q96PC5 1412 aa19.75■□□□□ 0.75
PCDH17-202ENST00000484979 NLRP2Q9NX02 1062 aa19.73■□□□□ 0.75
PCDH17-202ENST00000484979 CASKIN1Q8WXD9 1431 aa19.73■□□□□ 0.75
PCDH17-202ENST00000484979 CSPP1Q1MSJ5 1256 aa19.73■□□□□ 0.75
PCDH17-202ENST00000484979 THEMISQ8N1K5 641 aaPredicted RBP19.73■□□□□ 0.75
PCDH17-202ENST00000484979 RASSF8Q8NHQ8 419 aa19.73■□□□□ 0.75
PCDH17-202ENST00000484979 CFTRP13569 1480 aa19.73■□□□□ 0.75
PCDH17-202ENST00000484979 KIF16BQ96L93 1317 aa19.73■□□□□ 0.75
PCDH17-202ENST00000484979 MSNP26038 577 aaKnown RBP19.72■□□□□ 0.75
PCDH17-202ENST00000484979 ANKRD45Q5TZF3 282 aa19.72■□□□□ 0.75
PCDH17-202ENST00000484979 TMEM132EQ6IEE7 984 aa19.71■□□□□ 0.75
PCDH17-202ENST00000484979 GNAI1P63096 354 aa19.71■□□□□ 0.75
PCDH17-202ENST00000484979 FYCO1Q9BQS8 1478 aa19.71■□□□□ 0.75
PCDH17-202ENST00000484979 DDX19BQ9UMR2 479 aa19.7■□□□□ 0.74
PCDH17-202ENST00000484979 CENPQQ7L2Z9 268 aaPredicted RBP19.7■□□□□ 0.74
PCDH17-202ENST00000484979 RUNDC1Q96C34 613 aa19.7■□□□□ 0.74
PCDH17-202ENST00000484979 KIAA2012Q0VF49 1180 aa19.7■□□□□ 0.74
PCDH17-202ENST00000484979 FKBP5Q13451 457 aaPredicted RBP19.7■□□□□ 0.74
PCDH17-202ENST00000484979 PROSER2Q86WR7 435 aaPredicted RBP19.7■□□□□ 0.74
PCDH17-202ENST00000484979 RILPL2Q969X0 211 aa19.7■□□□□ 0.74
PCDH17-202ENST00000484979 CPLX2Q6PUV4 134 aaKnown RBP19.69■□□□□ 0.74
PCDH17-202ENST00000484979 GGNBP2Q9H3C7 697 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms