RNA–Protein interactions for RNA: ENST00000484404.1

ITGA4-210, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-210ENST00000484404 PTPRKQ15262 1439 aa21.53■■□□□ 1.04
ITGA4-210ENST00000484404 CEP170BQ9Y4F5 1589 aaPredicted RBP21.53■■□□□ 1.04
ITGA4-210ENST00000484404 EIF2AK4Q9P2K8 1649 aaKnown RBP21.52■■□□□ 1.04
ITGA4-210ENST00000484404 CFAP65Q6ZU64 1925 aaKnown RBP21.52■■□□□ 1.04
ITGA4-210ENST00000484404 FGD6Q6ZV73 1430 aa21.5■■□□□ 1.03
ITGA4-210ENST00000484404 MROH1Q8NDA8 1641 aa21.48■■□□□ 1.03
ITGA4-210ENST00000484404 ZC3H13Q5T200 1668 aaKnown RBP21.48■■□□□ 1.03
ITGA4-210ENST00000484404 ABCC5O15440 1437 aa21.46■■□□□ 1.03
ITGA4-210ENST00000484404 DAPK1P53355 1430 aa21.46■■□□□ 1.03
ITGA4-210ENST00000484404 NCOA1Q15788 1441 aa21.46■■□□□ 1.03
ITGA4-210ENST00000484404 TCOF1Q13428 1488 aaKnown RBP21.45■■□□□ 1.03
ITGA4-210ENST00000484404 SHANK2Q9UPX8 1470 aa21.45■■□□□ 1.02
ITGA4-210ENST00000484404 DUOX2Q9NRD8 1548 aa21.45■■□□□ 1.02
ITGA4-210ENST00000484404 FAM135AQ9P2D6 1515 aa21.45■■□□□ 1.02
ITGA4-210ENST00000484404 ABCC3O15438 1527 aa21.44■■□□□ 1.02
ITGA4-210ENST00000484404 FBXO31Q5XUX0 539 aaPredicted RBP21.43■■□□□ 1.02
ITGA4-210ENST00000484404 WASHC2CQ9Y4E1 1318 aa21.43■■□□□ 1.02
ITGA4-210ENST00000484404 PZPP20742 1482 aa21.43■■□□□ 1.02
ITGA4-210ENST00000484404 POLR1AO95602 1720 aaPredicted RBP21.43■■□□□ 1.02
ITGA4-210ENST00000484404 PPP6R1Q9UPN7 881 aa21.42■■□□□ 1.02
ITGA4-210ENST00000484404 KIF15Q9NS87 1388 aa21.41■■□□□ 1.02
ITGA4-210ENST00000484404 FBXO41Q8TF61 875 aa21.41■■□□□ 1.02
ITGA4-210ENST00000484404 A2ML1A8K2U0 1454 aa21.39■■□□□ 1.02
ITGA4-210ENST00000484404 TNRQ92752 1358 aa21.39■■□□□ 1.02
ITGA4-210ENST00000484404 NCKAP5LQ9HCH0 1330 aa21.39■■□□□ 1.01
ITGA4-210ENST00000484404 RRP7BPQ9NSQ0 103 aa21.39■■□□□ 1.01
ITGA4-210ENST00000484404 CHIC2Q9UKJ5 165 aa21.39■■□□□ 1.01
ITGA4-210ENST00000484404 PTPRTO14522 1441 aa21.38■■□□□ 1.01
ITGA4-210ENST00000484404 CERKQ8TCT0 537 aa21.37■■□□□ 1.01
ITGA4-210ENST00000484404 DMRT2Q9Y5R5 561 aa21.37■■□□□ 1.01
ITGA4-210ENST00000484404 DEPDC5O75140 1603 aa21.37■■□□□ 1.01
ITGA4-210ENST00000484404 PRDM15P57071 1507 aaPredicted RBP21.36■■□□□ 1.01
ITGA4-210ENST00000484404 FAM50AQ14320 339 aaKnown RBP21.36■■□□□ 1.01
ITGA4-210ENST00000484404 PPARGC1BQ86YN6 1023 aaKnown RBP21.35■■□□□ 1.01
ITGA4-210ENST00000484404 ERBINQ96RT1 1412 aa21.34■■□□□ 1.01
ITGA4-210ENST00000484404 PLA2R1Q13018 1463 aa21.33■■□□□ 1.01
ITGA4-210ENST00000484404 SPATA31D1Q6ZQQ2 1576 aa21.32■■□□□ 1
ITGA4-210ENST00000484404 LTBP4Q8N2S1 1624 aa21.31■■□□□ 1
ITGA4-210ENST00000484404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.31■■□□□ 1
ITGA4-210ENST00000484404 ERVK-7P63135 1459 aa21.31■■□□□ 1
ITGA4-210ENST00000484404 NEURL4Q96JN8 1562 aa21.31■■□□□ 1
ITGA4-210ENST00000484404 UGGT1Q9NYU2 1555 aa21.3■■□□□ 1
ITGA4-210ENST00000484404 ANKRD30AQ9BXX3 1397 aa21.29■■□□□ 1
ITGA4-210ENST00000484404 UBR1Q8IWV7 1749 aa21.28■■□□□ 1
ITGA4-210ENST00000484404 ADGRL2O95490 1459 aa21.26■□□□□ 0.99
ITGA4-210ENST00000484404 NLRP1Q9C000 1473 aa21.26■□□□□ 0.99
ITGA4-210ENST00000484404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.25■□□□□ 0.99
ITGA4-210ENST00000484404 ZNF335Q9H4Z2 1342 aaPredicted RBP21.25■□□□□ 0.99
ITGA4-210ENST00000484404 PKD2Q13563 968 aa21.23■□□□□ 0.99
ITGA4-210ENST00000484404 PIK3C2BO00750 1634 aa21.22■□□□□ 0.99
ITGA4-210ENST00000484404 IQGAP1P46940 1657 aa21.22■□□□□ 0.99
ITGA4-210ENST00000484404 VWDEQ8N2E2 1590 aa21.22■□□□□ 0.99
ITGA4-210ENST00000484404 KANK1Q14678 1352 aa21.21■□□□□ 0.99
ITGA4-210ENST00000484404 EFCAB6Q5THR3 1501 aa21.19■□□□□ 0.98
ITGA4-210ENST00000484404 ITGAEP38570 1179 aa21.17■□□□□ 0.98
ITGA4-210ENST00000484404 SYNMO15061 1565 aa21.17■□□□□ 0.98
ITGA4-210ENST00000484404 MYO5BQ9ULV0 1848 aa21.17■□□□□ 0.98
ITGA4-210ENST00000484404 GCC2Q8IWJ2 1684 aa21.16■□□□□ 0.98
ITGA4-210ENST00000484404 LMTK2Q8IWU2 1503 aa21.16■□□□□ 0.98
ITGA4-210ENST00000484404 ARHGAP31Q2M1Z3 1444 aa21.16■□□□□ 0.98
ITGA4-210ENST00000484404 ANKRD50Q9ULJ7 1429 aa21.16■□□□□ 0.98
ITGA4-210ENST00000484404 UNC13BO14795 1591 aa21.15■□□□□ 0.98
ITGA4-210ENST00000484404 THEMISQ8N1K5 641 aaPredicted RBP21.15■□□□□ 0.98
ITGA4-210ENST00000484404 TET3O43151 1660 aa21.15■□□□□ 0.98
ITGA4-210ENST00000484404 STRCP1A6NGW2 1772 aa21.14■□□□□ 0.97
ITGA4-210ENST00000484404 NPHP4O75161 1426 aaPredicted RBP21.13■□□□□ 0.97
ITGA4-210ENST00000484404 ANKLE2Q86XL3 938 aa21.12■□□□□ 0.97
ITGA4-210ENST00000484404 E9PCH4 1651 aa21.1■□□□□ 0.97
ITGA4-210ENST00000484404 IQSEC2Q5JU85 1478 aa21.1■□□□□ 0.97
ITGA4-210ENST00000484404 MED14O60244 1454 aa21.09■□□□□ 0.97
ITGA4-210ENST00000484404 IQGAP3Q86VI3 1631 aa21.07■□□□□ 0.96
ITGA4-210ENST00000484404 KDM5AP29375 1690 aaKnown RBP21.07■□□□□ 0.96
ITGA4-210ENST00000484404 SCAF11Q99590 1463 aaKnown RBP21.07■□□□□ 0.96
ITGA4-210ENST00000484404 ADGRB3O60242 1522 aa21.06■□□□□ 0.96
ITGA4-210ENST00000484404 SLIT1O75093 1534 aa21.06■□□□□ 0.96
ITGA4-210ENST00000484404 ARHGAP23Q9P227 1491 aa21.05■□□□□ 0.96
ITGA4-210ENST00000484404 CPS1P31327 1500 aa21.04■□□□□ 0.96
ITGA4-210ENST00000484404 ROCK1Q13464 1354 aa21.04■□□□□ 0.96
ITGA4-210ENST00000484404 STAG3Q9UJ98 1225 aa21.03■□□□□ 0.96
ITGA4-210ENST00000484404 NOS1P29475 1434 aa21.03■□□□□ 0.96
ITGA4-210ENST00000484404 UBAP1LF5GYI3 381 aa21.01■□□□□ 0.95
ITGA4-210ENST00000484404 LTKP29376 864 aa21.01■□□□□ 0.95
ITGA4-210ENST00000484404 IDI1Q13907 227 aa21■□□□□ 0.95
ITGA4-210ENST00000484404 XIRP1Q702N8 1843 aaKnown RBP20.99■□□□□ 0.95
ITGA4-210ENST00000484404 TXNDC2Q86VQ3 553 aa20.99■□□□□ 0.95
ITGA4-210ENST00000484404 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
ITGA4-210ENST00000484404 RPRD2Q5VT52 1461 aaKnown RBP20.99■□□□□ 0.95
ITGA4-210ENST00000484404 RRBP1Q9P2E9 1410 aaKnown RBP20.98■□□□□ 0.95
ITGA4-210ENST00000484404 TMEM2Q9UHN6 1383 aa20.97■□□□□ 0.95
ITGA4-210ENST00000484404 TMEM131LA2VDJ0 1609 aa20.96■□□□□ 0.95
ITGA4-210ENST00000484404 SPHKAPQ2M3C7 1700 aa20.96■□□□□ 0.95
ITGA4-210ENST00000484404 SCAF1Q9H7N4 1312 aaKnown RBP20.95■□□□□ 0.94
ITGA4-210ENST00000484404 NUP155O75694 1391 aa20.95■□□□□ 0.94
ITGA4-210ENST00000484404 EID1Q9Y6B2 187 aa20.94■□□□□ 0.94
ITGA4-210ENST00000484404 LRRC7Q96NW7 1537 aa20.93■□□□□ 0.94
ITGA4-210ENST00000484404 PIP4K2BP78356 416 aa20.92■□□□□ 0.94
ITGA4-210ENST00000484404 ALKQ9UM73 1620 aa20.92■□□□□ 0.94
ITGA4-210ENST00000484404 CHGAP10645 457 aaKnown RBP20.9■□□□□ 0.94
ITGA4-210ENST00000484404 SLC52A1Q9NWF4 448 aa20.88■□□□□ 0.93
ITGA4-210ENST00000484404 SLC26A8Q96RN1 970 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms