RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 CAMSAP1Q5T5Y3 1602 aa44.57■■■■■ 4.72
HLA-C-207ENST00000484378 CERKQ8TCT0 537 aa44.56■■■■■ 4.72
HLA-C-207ENST00000484378 PTPRTO14522 1441 aa44.56■■■■■ 4.72
HLA-C-207ENST00000484378 CEP170BQ9Y4F5 1589 aaPredicted RBP44.52■■■■■ 4.72
HLA-C-207ENST00000484378 WASHC2CQ9Y4E1 1318 aa44.48■■■■■ 4.71
HLA-C-207ENST00000484378 PTPN23Q9H3S7 1636 aa44.45■■■■■ 4.71
HLA-C-207ENST00000484378 PZPP20742 1482 aa44.44■■■■■ 4.7
HLA-C-207ENST00000484378 RNF17Q9BXT8 1623 aaKnown RBP44.43■■■■■ 4.7
HLA-C-207ENST00000484378 EIF2AK4Q9P2K8 1649 aaKnown RBP44.42■■■■■ 4.7
HLA-C-207ENST00000484378 PLA2R1Q13018 1463 aa44.4■■■■■ 4.7
HLA-C-207ENST00000484378 CROCC2H7BZ55 1655 aa44.39■■■■■ 4.7
HLA-C-207ENST00000484378 A2ML1A8K2U0 1454 aa44.38■■■■■ 4.69
HLA-C-207ENST00000484378 TNRQ92752 1358 aa44.37■■■■■ 4.69
HLA-C-207ENST00000484378 SHANK2Q9UPX8 1470 aa44.36■■■■■ 4.69
HLA-C-207ENST00000484378 FGD6Q6ZV73 1430 aa44.36■■■■■ 4.69
HLA-C-207ENST00000484378 FBXO31Q5XUX0 539 aaPredicted RBP44.35■■■■■ 4.69
HLA-C-207ENST00000484378 NCKAP5LQ9HCH0 1330 aa44.34■■■■■ 4.69
HLA-C-207ENST00000484378 DUOX2Q9NRD8 1548 aa44.34■■■■■ 4.69
HLA-C-207ENST00000484378 ABCC5O15440 1437 aa44.33■■■■■ 4.69
HLA-C-207ENST00000484378 ZC3H13Q5T200 1668 aaKnown RBP44.32■■■■■ 4.69
HLA-C-207ENST00000484378 DNMT1P26358 1616 aaKnown RBP44.31■■■■■ 4.68
HLA-C-207ENST00000484378 ABCC3O15438 1527 aa44.3■■■■■ 4.68
HLA-C-207ENST00000484378 TCOF1Q13428 1488 aaKnown RBP44.29■■■■■ 4.68
HLA-C-207ENST00000484378 PKD2Q13563 968 aa44.29■■■■■ 4.68
HLA-C-207ENST00000484378 KIF15Q9NS87 1388 aa44.28■■■■■ 4.68
HLA-C-207ENST00000484378 DAPK1P53355 1430 aa44.27■■■■■ 4.68
HLA-C-207ENST00000484378 MROH1Q8NDA8 1641 aa44.27■■■■■ 4.68
HLA-C-207ENST00000484378 LTBP4Q8N2S1 1624 aa44.24■■■■■ 4.67
HLA-C-207ENST00000484378 ERBINQ96RT1 1412 aa44.19■■■■■ 4.66
HLA-C-207ENST00000484378 RRP7BPQ9NSQ0 103 aa44.19■■■■■ 4.66
HLA-C-207ENST00000484378 NLRP1Q9C000 1473 aa44.18■■■■■ 4.66
HLA-C-207ENST00000484378 CEP152O94986 1710 aa44.18■■■■■ 4.66
HLA-C-207ENST00000484378 PRDM15P57071 1507 aaPredicted RBP44.13■■■■■ 4.65
HLA-C-207ENST00000484378 SPATA31D1Q6ZQQ2 1576 aa44.12■■■■■ 4.65
HLA-C-207ENST00000484378 POLR1AO95602 1720 aaPredicted RBP44.12■■■■■ 4.65
HLA-C-207ENST00000484378 UGGT1Q9NYU2 1555 aa44.09■■■■■ 4.65
HLA-C-207ENST00000484378 ERVK-7P63135 1459 aa44.09■■■■■ 4.65
HLA-C-207ENST00000484378 ZNF335Q9H4Z2 1342 aaPredicted RBP44.09■■■■■ 4.65
HLA-C-207ENST00000484378 ANKRD30AQ9BXX3 1397 aa44.08■■■■■ 4.65
HLA-C-207ENST00000484378 CHIC2Q9UKJ5 165 aa44.07■■■■■ 4.65
HLA-C-207ENST00000484378 IQSEC2Q5JU85 1478 aa44.07■■■■■ 4.65
HLA-C-207ENST00000484378 THEMISQ8N1K5 641 aaPredicted RBP44.04■■■■■ 4.64
HLA-C-207ENST00000484378 NEURL4Q96JN8 1562 aa44.04■■■■■ 4.64
HLA-C-207ENST00000484378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP44.04■■■■■ 4.64
HLA-C-207ENST00000484378 DEPDC5O75140 1603 aa44.03■■■■■ 4.64
HLA-C-207ENST00000484378 FAM50AQ14320 339 aaKnown RBP44.01■■■■■ 4.64
HLA-C-207ENST00000484378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP43.99■■■■■ 4.63
HLA-C-207ENST00000484378 ANKLE2Q86XL3 938 aa43.97■■■■■ 4.63
HLA-C-207ENST00000484378 KANK1Q14678 1352 aa43.96■■■■■ 4.63
HLA-C-207ENST00000484378 CFAP65Q6ZU64 1925 aaKnown RBP43.96■■■■■ 4.63
HLA-C-207ENST00000484378 ARHGAP31Q2M1Z3 1444 aa43.95■■■■■ 4.63
HLA-C-207ENST00000484378 ADGRL2O95490 1459 aa43.95■■■■■ 4.63
HLA-C-207ENST00000484378 NPHP4O75161 1426 aaPredicted RBP43.85■■■■■ 4.61
HLA-C-207ENST00000484378 MED14O60244 1454 aa43.84■■■■■ 4.61
HLA-C-207ENST00000484378 UBR1Q8IWV7 1749 aa43.84■■■■■ 4.61
HLA-C-207ENST00000484378 VWDEQ8N2E2 1590 aa43.83■■■■■ 4.61
HLA-C-207ENST00000484378 LMTK2Q8IWU2 1503 aa43.83■■■■■ 4.61
HLA-C-207ENST00000484378 IQGAP1P46940 1657 aa43.8■■■■■ 4.6
HLA-C-207ENST00000484378 ANKRD50Q9ULJ7 1429 aa43.76■■■■■ 4.6
HLA-C-207ENST00000484378 CPS1P31327 1500 aa43.76■■■■■ 4.6
HLA-C-207ENST00000484378 EFCAB6Q5THR3 1501 aa43.73■■■■■ 4.59
HLA-C-207ENST00000484378 UBAP1LF5GYI3 381 aa43.72■■■■■ 4.59
HLA-C-207ENST00000484378 PIK3C2BO00750 1634 aa43.7■■■■■ 4.59
HLA-C-207ENST00000484378 SCAF11Q99590 1463 aaKnown RBP43.68■■■■■ 4.58
HLA-C-207ENST00000484378 SLIT1O75093 1534 aa43.66■■■■■ 4.58
HLA-C-207ENST00000484378 ARHGAP23Q9P227 1491 aa43.65■■■■■ 4.58
HLA-C-207ENST00000484378 SYNMO15061 1565 aa43.63■■■■■ 4.57
HLA-C-207ENST00000484378 PPARGC1BQ86YN6 1023 aaKnown RBP43.62■■■■■ 4.57
HLA-C-207ENST00000484378 STAG3Q9UJ98 1225 aa43.61■■■■■ 4.57
HLA-C-207ENST00000484378 NOS1P29475 1434 aa43.58■■■■■ 4.57
HLA-C-207ENST00000484378 ROCK1Q13464 1354 aa43.58■■■■■ 4.57
HLA-C-207ENST00000484378 TXNDC2Q86VQ3 553 aa43.58■■■■■ 4.57
HLA-C-207ENST00000484378 KDM5AP29375 1690 aaKnown RBP43.58■■■■■ 4.57
HLA-C-207ENST00000484378 LTKP29376 864 aa43.56■■■■■ 4.56
HLA-C-207ENST00000484378 UNC13BO14795 1591 aa43.55■■■■■ 4.56
HLA-C-207ENST00000484378 EID1Q9Y6B2 187 aa43.55■■■■■ 4.56
HLA-C-207ENST00000484378 RPRD2Q5VT52 1461 aaKnown RBP43.55■■■■■ 4.56
HLA-C-207ENST00000484378 TET3O43151 1660 aa43.54■■■■■ 4.56
HLA-C-207ENST00000484378 IDI1Q13907 227 aa43.54■■■■■ 4.56
HLA-C-207ENST00000484378 TMEM2Q9UHN6 1383 aa43.54■■■■■ 4.56
HLA-C-207ENST00000484378 ITGAEP38570 1179 aa43.5■■■■■ 4.55
HLA-C-207ENST00000484378 STRCP1A6NGW2 1772 aa43.49■■■■■ 4.55
HLA-C-207ENST00000484378 ADGRB3O60242 1522 aa43.49■■■■■ 4.55
HLA-C-207ENST00000484378 GCC2Q8IWJ2 1684 aa43.47■■■■■ 4.55
HLA-C-207ENST00000484378 TOM1O60784 492 aa43.45■■■■■ 4.55
HLA-C-207ENST00000484378 SLC52A1Q9NWF4 448 aa43.45■■■■■ 4.55
HLA-C-207ENST00000484378 SCAF1Q9H7N4 1312 aaKnown RBP43.44■■■■■ 4.54
HLA-C-207ENST00000484378 LRRC7Q96NW7 1537 aa43.41■■■■■ 4.54
HLA-C-207ENST00000484378 DISP3Q9P2K9 1392 aa43.41■■■■■ 4.54
HLA-C-207ENST00000484378 PIP4K2BP78356 416 aa43.39■■■■■ 4.54
HLA-C-207ENST00000484378 IQGAP3Q86VI3 1631 aa43.38■■■■■ 4.54
HLA-C-207ENST00000484378 E9PCH4 1651 aa43.33■■■■■ 4.53
HLA-C-207ENST00000484378 NUP155O75694 1391 aa43.29■■■■■ 4.52
HLA-C-207ENST00000484378 ALKQ9UM73 1620 aa43.28■■■■■ 4.52
HLA-C-207ENST00000484378 RRBP1Q9P2E9 1410 aaKnown RBP43.26■■■■■ 4.52
HLA-C-207ENST00000484378 MYO5BQ9ULV0 1848 aa43.26■■■■■ 4.52
HLA-C-207ENST00000484378 TMEM131LA2VDJ0 1609 aa43.24■■■■■ 4.51
HLA-C-207ENST00000484378 HSPA1LP34931 641 aa43.21■■■■■ 4.51
HLA-C-207ENST00000484378 SLC26A8Q96RN1 970 aa43.21■■■■■ 4.51
HLA-C-207ENST00000484378 ZFYVE9O95405 1425 aa43.2■■■■■ 4.51
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms