RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 PKD2Q13563 968 aa18.64■□□□□ 0.57
SNRNP200-206ENST00000484372 KDM5DQ9BY66 1539 aa18.64■□□□□ 0.57
SNRNP200-206ENST00000484372 MAST1Q9Y2H9 1570 aa18.62■□□□□ 0.57
SNRNP200-206ENST00000484372 MYO3AQ8NEV4 1616 aa18.62■□□□□ 0.57
SNRNP200-206ENST00000484372 CEP170BQ9Y4F5 1589 aaPredicted RBP18.61■□□□□ 0.57
SNRNP200-206ENST00000484372 PLA2R1Q13018 1463 aa18.6■□□□□ 0.57
SNRNP200-206ENST00000484372 TNRQ92752 1358 aa18.6■□□□□ 0.57
SNRNP200-206ENST00000484372 NCKAP5LQ9HCH0 1330 aa18.6■□□□□ 0.57
SNRNP200-206ENST00000484372 ZNF142P52746 1687 aaPredicted RBP18.6■□□□□ 0.57
SNRNP200-206ENST00000484372 PZPP20742 1482 aa18.59■□□□□ 0.57
SNRNP200-206ENST00000484372 A2ML1A8K2U0 1454 aa18.58■□□□□ 0.57
SNRNP200-206ENST00000484372 FBXO31Q5XUX0 539 aaPredicted RBP18.58■□□□□ 0.56
SNRNP200-206ENST00000484372 DUOX2Q9NRD8 1548 aa18.55■□□□□ 0.56
SNRNP200-206ENST00000484372 EIF2AK4Q9P2K8 1649 aaKnown RBP18.55■□□□□ 0.56
SNRNP200-206ENST00000484372 PTPN23Q9H3S7 1636 aa18.54■□□□□ 0.56
SNRNP200-206ENST00000484372 THEMISQ8N1K5 641 aaPredicted RBP18.54■□□□□ 0.56
SNRNP200-206ENST00000484372 FGD6Q6ZV73 1430 aa18.54■□□□□ 0.56
SNRNP200-206ENST00000484372 TCOF1Q13428 1488 aaKnown RBP18.53■□□□□ 0.56
SNRNP200-206ENST00000484372 SHANK2Q9UPX8 1470 aa18.53■□□□□ 0.56
SNRNP200-206ENST00000484372 RNF17Q9BXT8 1623 aaKnown RBP18.53■□□□□ 0.56
SNRNP200-206ENST00000484372 ABCC5O15440 1437 aa18.53■□□□□ 0.56
SNRNP200-206ENST00000484372 RRP7BPQ9NSQ0 103 aa18.53■□□□□ 0.56
SNRNP200-206ENST00000484372 KIF15Q9NS87 1388 aa18.53■□□□□ 0.56
SNRNP200-206ENST00000484372 NLRP1Q9C000 1473 aa18.52■□□□□ 0.56
SNRNP200-206ENST00000484372 DNMT1P26358 1616 aaKnown RBP18.52■□□□□ 0.55
SNRNP200-206ENST00000484372 ZC3H13Q5T200 1668 aaKnown RBP18.51■□□□□ 0.55
SNRNP200-206ENST00000484372 ANKLE2Q86XL3 938 aa18.51■□□□□ 0.55
SNRNP200-206ENST00000484372 DAPK1P53355 1430 aa18.5■□□□□ 0.55
SNRNP200-206ENST00000484372 ERBINQ96RT1 1412 aa18.5■□□□□ 0.55
SNRNP200-206ENST00000484372 IQSEC2Q5JU85 1478 aa18.5■□□□□ 0.55
SNRNP200-206ENST00000484372 ABCC3O15438 1527 aa18.49■□□□□ 0.55
SNRNP200-206ENST00000484372 LTBP4Q8N2S1 1624 aa18.49■□□□□ 0.55
SNRNP200-206ENST00000484372 ANKRD30AQ9BXX3 1397 aa18.49■□□□□ 0.55
SNRNP200-206ENST00000484372 ZNF335Q9H4Z2 1342 aaPredicted RBP18.48■□□□□ 0.55
SNRNP200-206ENST00000484372 KANK1Q14678 1352 aa18.47■□□□□ 0.55
SNRNP200-206ENST00000484372 CHIC2Q9UKJ5 165 aa18.47■□□□□ 0.55
SNRNP200-206ENST00000484372 CROCC2H7BZ55 1655 aa18.47■□□□□ 0.55
SNRNP200-206ENST00000484372 UGGT1Q9NYU2 1555 aa18.47■□□□□ 0.55
SNRNP200-206ENST00000484372 FAM50AQ14320 339 aaKnown RBP18.46■□□□□ 0.55
SNRNP200-206ENST00000484372 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.46■□□□□ 0.552e-16■□□□□ 9.3
SNRNP200-206ENST00000484372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.45■□□□□ 0.54
SNRNP200-206ENST00000484372 ERVK-7P63135 1459 aa18.44■□□□□ 0.54
SNRNP200-206ENST00000484372 SPATA31D1Q6ZQQ2 1576 aa18.43■□□□□ 0.54
SNRNP200-206ENST00000484372 MROH1Q8NDA8 1641 aa18.42■□□□□ 0.54
SNRNP200-206ENST00000484372 POLR1AO95602 1720 aaPredicted RBP18.41■□□□□ 0.54
SNRNP200-206ENST00000484372 PRDM15P57071 1507 aaPredicted RBP18.41■□□□□ 0.54
SNRNP200-206ENST00000484372 ARHGAP31Q2M1Z3 1444 aa18.4■□□□□ 0.54
SNRNP200-206ENST00000484372 CEP152O94986 1710 aa18.4■□□□□ 0.54
SNRNP200-206ENST00000484372 UBAP1LF5GYI3 381 aa18.39■□□□□ 0.53
SNRNP200-206ENST00000484372 NPHP4O75161 1426 aaPredicted RBP18.38■□□□□ 0.53
SNRNP200-206ENST00000484372 STAG3Q9UJ98 1225 aa18.37■□□□□ 0.53
SNRNP200-206ENST00000484372 CFAP65Q6ZU64 1925 aaKnown RBP18.37■□□□□ 0.53
SNRNP200-206ENST00000484372 MED14O60244 1454 aa18.36■□□□□ 0.53
SNRNP200-206ENST00000484372 DEPDC5O75140 1603 aa18.36■□□□□ 0.53
SNRNP200-206ENST00000484372 ADGRL2O95490 1459 aa18.36■□□□□ 0.53
SNRNP200-206ENST00000484372 NEURL4Q96JN8 1562 aa18.36■□□□□ 0.53
SNRNP200-206ENST00000484372 CPS1P31327 1500 aa18.35■□□□□ 0.53
SNRNP200-206ENST00000484372 EID1Q9Y6B2 187 aa18.34■□□□□ 0.53
SNRNP200-206ENST00000484372 ANKRD50Q9ULJ7 1429 aa18.32■□□□□ 0.52
SNRNP200-206ENST00000484372 TOM1O60784 492 aa18.32■□□□□ 0.52
SNRNP200-206ENST00000484372 TXNDC2Q86VQ3 553 aa18.32■□□□□ 0.52
SNRNP200-206ENST00000484372 LMTK2Q8IWU2 1503 aa18.32■□□□□ 0.52
SNRNP200-206ENST00000484372 IQGAP1P46940 1657 aa18.3■□□□□ 0.52
SNRNP200-206ENST00000484372 UBR1Q8IWV7 1749 aa18.29■□□□□ 0.52
SNRNP200-206ENST00000484372 SCAF11Q99590 1463 aaKnown RBP18.29■□□□□ 0.52
SNRNP200-206ENST00000484372 VWDEQ8N2E2 1590 aa18.28■□□□□ 0.52
SNRNP200-206ENST00000484372 SCAF1Q9H7N4 1312 aaKnown RBP18.27■□□□□ 0.52
SNRNP200-206ENST00000484372 IDI1Q13907 227 aa18.27■□□□□ 0.52
SNRNP200-206ENST00000484372 SLC52A1Q9NWF4 448 aa18.27■□□□□ 0.52
SNRNP200-206ENST00000484372 DISP3Q9P2K9 1392 aa18.27■□□□□ 0.51
SNRNP200-206ENST00000484372 SLIT1O75093 1534 aa18.26■□□□□ 0.51
SNRNP200-206ENST00000484372 ARHGAP23Q9P227 1491 aa18.26■□□□□ 0.51
SNRNP200-206ENST00000484372 LTKP29376 864 aa18.25■□□□□ 0.51
SNRNP200-206ENST00000484372 ROCK1Q13464 1354 aa18.25■□□□□ 0.51
SNRNP200-206ENST00000484372 TMEM2Q9UHN6 1383 aa18.25■□□□□ 0.51
SNRNP200-206ENST00000484372 EFCAB6Q5THR3 1501 aa18.24■□□□□ 0.51
SNRNP200-206ENST00000484372 PIP4K2BP78356 416 aa18.24■□□□□ 0.51
SNRNP200-206ENST00000484372 RPRD2Q5VT52 1461 aaKnown RBP18.24■□□□□ 0.51
SNRNP200-206ENST00000484372 PIK3C2BO00750 1634 aa18.23■□□□□ 0.51
SNRNP200-206ENST00000484372 ITGAEP38570 1179 aa18.23■□□□□ 0.51
SNRNP200-206ENST00000484372 NOS1P29475 1434 aa18.23■□□□□ 0.51
SNRNP200-206ENST00000484372 HDGFP51858 240 aaKnown RBP18.21■□□□□ 0.51
SNRNP200-206ENST00000484372 PPARGC1BQ86YN6 1023 aaKnown RBP18.21■□□□□ 0.51
SNRNP200-206ENST00000484372 KDM5AP29375 1690 aaKnown RBP18.21■□□□□ 0.51
SNRNP200-206ENST00000484372 BCANQ96GW7 911 aa18.19■□□□□ 0.5
SNRNP200-206ENST00000484372 SYNMO15061 1565 aa18.18■□□□□ 0.5
SNRNP200-206ENST00000484372 TET3O43151 1660 aa18.18■□□□□ 0.5
SNRNP200-206ENST00000484372 LRRC7Q96NW7 1537 aa18.17■□□□□ 0.5
SNRNP200-206ENST00000484372 ADGRB3O60242 1522 aa18.16■□□□□ 0.5
SNRNP200-206ENST00000484372 UNC13BO14795 1591 aa18.16■□□□□ 0.5
SNRNP200-206ENST00000484372 NUP155O75694 1391 aa18.16■□□□□ 0.5
SNRNP200-206ENST00000484372 PPP1R15AO75807 674 aaPredicted RBP18.15■□□□□ 0.5
SNRNP200-206ENST00000484372 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
SNRNP200-206ENST00000484372 HSPA1LP34931 641 aa18.14■□□□□ 0.49
SNRNP200-206ENST00000484372 GCC2Q8IWJ2 1684 aa18.13■□□□□ 0.49
SNRNP200-206ENST00000484372 KCNA6P17658 529 aa18.12■□□□□ 0.49
SNRNP200-206ENST00000484372 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.12■□□□□ 0.49
SNRNP200-206ENST00000484372 SLC26A8Q96RN1 970 aa18.12■□□□□ 0.49
SNRNP200-206ENST00000484372 STRCP1A6NGW2 1772 aa18.12■□□□□ 0.49
SNRNP200-206ENST00000484372 IQGAP3Q86VI3 1631 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms