RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 PLA2R1Q13018 1463 aa26.26■■□□□ 1.79
PCGF3-211ENST00000484141 MYO3AQ8NEV4 1616 aa26.24■■□□□ 1.79
PCGF3-211ENST00000484141 KIF3BO15066 747 aa26.23■■□□□ 1.79
PCGF3-211ENST00000484141 APLP2Q06481 763 aa26.23■■□□□ 1.79
PCGF3-211ENST00000484141 RSPH4AQ5TD94 716 aa26.23■■□□□ 1.79
PCGF3-211ENST00000484141 CEP170BQ9Y4F5 1589 aaPredicted RBP26.23■■□□□ 1.79
PCGF3-211ENST00000484141 PTPRKQ15262 1439 aa26.22■■□□□ 1.79
PCGF3-211ENST00000484141 ZNF142P52746 1687 aaPredicted RBP26.22■■□□□ 1.79
PCGF3-211ENST00000484141 TSPY4P0CV99 314 aa26.21■■□□□ 1.79
PCGF3-211ENST00000484141 TSPY10P0CW01 314 aa26.21■■□□□ 1.79
PCGF3-211ENST00000484141 TCOF1Q13428 1488 aaKnown RBP26.21■■□□□ 1.79
PCGF3-211ENST00000484141 MIA2Q96PC5 1412 aa26.21■■□□□ 1.79
PCGF3-211ENST00000484141 PPP6R1Q9UPN7 881 aa26.19■■□□□ 1.78
PCGF3-211ENST00000484141 MAST1Q9Y2H9 1570 aa26.16■■□□□ 1.78
PCGF3-211ENST00000484141 PTPN23Q9H3S7 1636 aa26.16■■□□□ 1.78
PCGF3-211ENST00000484141 SCAF1Q9H7N4 1312 aaKnown RBP26.12■■□□□ 1.77
PCGF3-211ENST00000484141 FBXO31Q5XUX0 539 aaPredicted RBP26.11■■□□□ 1.77
PCGF3-211ENST00000484141 ABCC5O15440 1437 aa26.11■■□□□ 1.77
PCGF3-211ENST00000484141 FGD6Q6ZV73 1430 aa26.1■■□□□ 1.77
PCGF3-211ENST00000484141 A2ML1A8K2U0 1454 aa26.1■■□□□ 1.77
PCGF3-211ENST00000484141 PIP4K2BP78356 416 aa26.08■■□□□ 1.77
PCGF3-211ENST00000484141 CROCC2H7BZ55 1655 aa26.08■■□□□ 1.77
PCGF3-211ENST00000484141 HSPA1LP34931 641 aa26.07■■□□□ 1.76
PCGF3-211ENST00000484141 KDM5DQ9BY66 1539 aa26.07■■□□□ 1.76
PCGF3-211ENST00000484141 WASHC2CQ9Y4E1 1318 aa26.06■■□□□ 1.76
PCGF3-211ENST00000484141 DNMT1P26358 1616 aaKnown RBP26.05■■□□□ 1.76
PCGF3-211ENST00000484141 TOM1O60784 492 aa26.04■■□□□ 1.76
PCGF3-211ENST00000484141 DAPK1P53355 1430 aa26.04■■□□□ 1.76
PCGF3-211ENST00000484141 RNF17Q9BXT8 1623 aaKnown RBP26.03■■□□□ 1.76
PCGF3-211ENST00000484141 RRP7BPQ9NSQ0 103 aa26.03■■□□□ 1.76
PCGF3-211ENST00000484141 MROH1Q8NDA8 1641 aa26.03■■□□□ 1.76
PCGF3-211ENST00000484141 CHIC2Q9UKJ5 165 aa26.02■■□□□ 1.76
PCGF3-211ENST00000484141 CPS1P31327 1500 aa26.01■■□□□ 1.75
PCGF3-211ENST00000484141 MED1Q15648 1581 aaPredicted RBP26.01■■□□□ 1.75
PCGF3-211ENST00000484141 TNRQ92752 1358 aa26■■□□□ 1.75
PCGF3-211ENST00000484141 EIF2AK4Q9P2K8 1649 aaKnown RBP25.99■■□□□ 1.75
PCGF3-211ENST00000484141 PZPP20742 1482 aa25.99■■□□□ 1.75
PCGF3-211ENST00000484141 SHANK2Q9UPX8 1470 aa25.99■■□□□ 1.75
PCGF3-211ENST00000484141 KIF15Q9NS87 1388 aa25.99■■□□□ 1.75
PCGF3-211ENST00000484141 DUOX2Q9NRD8 1548 aa25.98■■□□□ 1.75
PCGF3-211ENST00000484141 CEP152O94986 1710 aa25.98■■□□□ 1.75
PCGF3-211ENST00000484141 PPARGC1BQ86YN6 1023 aaKnown RBP25.98■■□□□ 1.75
PCGF3-211ENST00000484141 ABCC3O15438 1527 aa25.98■■□□□ 1.75
PCGF3-211ENST00000484141 NEURL4Q96JN8 1562 aa25.97■■□□□ 1.75
PCGF3-211ENST00000484141 FAM135AQ9P2D6 1515 aa25.95■■□□□ 1.74
PCGF3-211ENST00000484141 POLR1AO95602 1720 aaPredicted RBP25.95■■□□□ 1.74
PCGF3-211ENST00000484141 CFAP65Q6ZU64 1925 aaKnown RBP25.95■■□□□ 1.74
PCGF3-211ENST00000484141 FAM50AQ14320 339 aaKnown RBP25.94■■□□□ 1.74
PCGF3-211ENST00000484141 ANKLE2Q86XL3 938 aa25.94■■□□□ 1.74
PCGF3-211ENST00000484141 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.93■■□□□ 1.746e-7■■■■■ 74.7
PCGF3-211ENST00000484141 ZC3H13Q5T200 1668 aaKnown RBP25.9■■□□□ 1.74
PCGF3-211ENST00000484141 THEMISQ8N1K5 641 aaPredicted RBP25.9■■□□□ 1.74
PCGF3-211ENST00000484141 PHF23Q9BUL5 403 aaPredicted RBP25.9■■□□□ 1.74
PCGF3-211ENST00000484141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.89■■□□□ 1.742e-7■■□□□ 14
PCGF3-211ENST00000484141 ERBINQ96RT1 1412 aa25.88■■□□□ 1.73
PCGF3-211ENST00000484141 VWDEQ8N2E2 1590 aa25.87■■□□□ 1.73
PCGF3-211ENST00000484141 NPHP4O75161 1426 aaPredicted RBP25.86■■□□□ 1.73
PCGF3-211ENST00000484141 NLRP1Q9C000 1473 aa25.85■■□□□ 1.73
PCGF3-211ENST00000484141 ANKRD30AQ9BXX3 1397 aa25.85■■□□□ 1.73
PCGF3-211ENST00000484141 PRDM15P57071 1507 aaPredicted RBP25.85■■□□□ 1.73
PCGF3-211ENST00000484141 UGGT1Q9NYU2 1555 aa25.85■■□□□ 1.73
PCGF3-211ENST00000484141 DEPDC5O75140 1603 aa25.84■■□□□ 1.73
PCGF3-211ENST00000484141 ERVK-7P63135 1459 aa25.84■■□□□ 1.73
PCGF3-211ENST00000484141 MED14O60244 1454 aa25.83■■□□□ 1.73
PCGF3-211ENST00000484141 ADGRL2O95490 1459 aa25.81■■□□□ 1.72
PCGF3-211ENST00000484141 ALKQ9UM73 1620 aa25.81■■□□□ 1.72
PCGF3-211ENST00000484141 SENP3Q9H4L4 574 aaPredicted RBP25.8■■□□□ 1.72
PCGF3-211ENST00000484141 IQGAP1P46940 1657 aa25.75■■□□□ 1.71
PCGF3-211ENST00000484141 LRRC7Q96NW7 1537 aa25.73■■□□□ 1.71
PCGF3-211ENST00000484141 ARHGAP31Q2M1Z3 1444 aa25.72■■□□□ 1.71
PCGF3-211ENST00000484141 ITGAEP38570 1179 aa25.72■■□□□ 1.71
PCGF3-211ENST00000484141 UBR1Q8IWV7 1749 aa25.71■■□□□ 1.71
PCGF3-211ENST00000484141 ANKRD50Q9ULJ7 1429 aa25.71■■□□□ 1.71
PCGF3-211ENST00000484141 KANK1Q14678 1352 aa25.7■■□□□ 1.71
PCGF3-211ENST00000484141 LMTK2Q8IWU2 1503 aa25.68■■□□□ 1.7
PCGF3-211ENST00000484141 SYNMO15061 1565 aa25.68■■□□□ 1.7
PCGF3-211ENST00000484141 STRCP1A6NGW2 1772 aa25.67■■□□□ 1.7
PCGF3-211ENST00000484141 PIK3C2BO00750 1634 aa25.66■■□□□ 1.7
PCGF3-211ENST00000484141 EFCAB6Q5THR3 1501 aa25.63■■□□□ 1.69
PCGF3-211ENST00000484141 LTKP29376 864 aa25.61■■□□□ 1.69
PCGF3-211ENST00000484141 IDI1Q13907 227 aa25.61■■□□□ 1.69
PCGF3-211ENST00000484141 SCAF11Q99590 1463 aaKnown RBP25.6■■□□□ 1.69
PCGF3-211ENST00000484141 ROCK1Q13464 1354 aa25.58■■□□□ 1.69
PCGF3-211ENST00000484141 NOS1P29475 1434 aa25.58■■□□□ 1.69
PCGF3-211ENST00000484141 RGS17Q9UGC6 210 aaPredicted RBP25.58■■□□□ 1.69
PCGF3-211ENST00000484141 UNC13BO14795 1591 aa25.57■■□□□ 1.68
PCGF3-211ENST00000484141 ARHGAP23Q9P227 1491 aa25.57■■□□□ 1.68
PCGF3-211ENST00000484141 TXNDC2Q86VQ3 553 aa25.56■■□□□ 1.68
PCGF3-211ENST00000484141 SLIT1O75093 1534 aa25.55■■□□□ 1.68
PCGF3-211ENST00000484141 TET3O43151 1660 aa25.55■■□□□ 1.68
PCGF3-211ENST00000484141 STAG3Q9UJ98 1225 aa25.52■■□□□ 1.68
PCGF3-211ENST00000484141 EID1Q9Y6B2 187 aa25.51■■□□□ 1.67
PCGF3-211ENST00000484141 RRBP1Q9P2E9 1410 aaKnown RBP25.51■■□□□ 1.67
PCGF3-211ENST00000484141 E9PCH4 1651 aa25.51■■□□□ 1.67
PCGF3-211ENST00000484141 GCC2Q8IWJ2 1684 aa25.51■■□□□ 1.67
PCGF3-211ENST00000484141 TMEM2Q9UHN6 1383 aa25.5■■□□□ 1.67
PCGF3-211ENST00000484141 MYO5BQ9ULV0 1848 aa25.5■■□□□ 1.67
PCGF3-211ENST00000484141 IQGAP3Q86VI3 1631 aa25.48■■□□□ 1.67
PCGF3-211ENST00000484141 ADGRB3O60242 1522 aa25.47■■□□□ 1.67
PCGF3-211ENST00000484141 RPRD2Q5VT52 1461 aaKnown RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms