RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 MIA2Q96PC5 1412 aa30.1■■■□□ 2.41
NDUFA3-213ENST00000484103 KDM5DQ9BY66 1539 aa30.09■■■□□ 2.41
NDUFA3-213ENST00000484103 CEP170BQ9Y4F5 1589 aaPredicted RBP30.09■■■□□ 2.41
NDUFA3-213ENST00000484103 PTPRTO14522 1441 aa30.06■■■□□ 2.4
NDUFA3-213ENST00000484103 MAST1Q9Y2H9 1570 aa30.06■■■□□ 2.4
NDUFA3-213ENST00000484103 ZNF142P52746 1687 aaPredicted RBP30.05■■■□□ 2.4
NDUFA3-213ENST00000484103 PTPN23Q9H3S7 1636 aa30.03■■■□□ 2.4
NDUFA3-213ENST00000484103 TNRQ92752 1358 aa30.02■■■□□ 2.4
NDUFA3-213ENST00000484103 PZPP20742 1482 aa29.99■■■□□ 2.39
NDUFA3-213ENST00000484103 RRP7BPQ9NSQ0 103 aa29.98■■■□□ 2.39
NDUFA3-213ENST00000484103 A2ML1A8K2U0 1454 aa29.97■■■□□ 2.39
NDUFA3-213ENST00000484103 ABCC5O15440 1437 aa29.96■■■□□ 2.39
NDUFA3-213ENST00000484103 DNMT1P26358 1616 aaKnown RBP29.95■■■□□ 2.38
NDUFA3-213ENST00000484103 RNF17Q9BXT8 1623 aaKnown RBP29.95■■■□□ 2.38
NDUFA3-213ENST00000484103 FGD6Q6ZV73 1430 aa29.95■■■□□ 2.38
NDUFA3-213ENST00000484103 CROCC2H7BZ55 1655 aa29.95■■■□□ 2.38
NDUFA3-213ENST00000484103 CHIC2Q9UKJ5 165 aa29.94■■■□□ 2.38
NDUFA3-213ENST00000484103 KIF15Q9NS87 1388 aa29.93■■■□□ 2.38
NDUFA3-213ENST00000484103 FAM135AQ9P2D6 1515 aa29.93■■■□□ 2.38
NDUFA3-213ENST00000484103 PLA2R1Q13018 1463 aa29.93■■■□□ 2.38
NDUFA3-213ENST00000484103 ABCC3O15438 1527 aa29.92■■■□□ 2.38
NDUFA3-213ENST00000484103 EIF2AK4Q9P2K8 1649 aaKnown RBP29.92■■■□□ 2.38
NDUFA3-213ENST00000484103 ZNF335Q9H4Z2 1342 aaPredicted RBP29.92■■■□□ 2.38
NDUFA3-213ENST00000484103 DUOX2Q9NRD8 1548 aa29.91■■■□□ 2.38
NDUFA3-213ENST00000484103 DAPK1P53355 1430 aa29.91■■■□□ 2.38
NDUFA3-213ENST00000484103 PKD2Q13563 968 aa29.91■■■□□ 2.38
NDUFA3-213ENST00000484103 LTBP4Q8N2S1 1624 aa29.9■■■□□ 2.38
NDUFA3-213ENST00000484103 CEP152O94986 1710 aa29.9■■■□□ 2.38
NDUFA3-213ENST00000484103 TCOF1Q13428 1488 aaKnown RBP29.89■■■□□ 2.38
NDUFA3-213ENST00000484103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.89■■■□□ 2.383e-6■■□□□ 11.7
NDUFA3-213ENST00000484103 MROH1Q8NDA8 1641 aa29.88■■■□□ 2.37
NDUFA3-213ENST00000484103 SHANK2Q9UPX8 1470 aa29.87■■■□□ 2.37
NDUFA3-213ENST00000484103 ZC3H13Q5T200 1668 aaKnown RBP29.86■■■□□ 2.37
NDUFA3-213ENST00000484103 FAM50AQ14320 339 aaKnown RBP29.86■■■□□ 2.37
NDUFA3-213ENST00000484103 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.85■■■□□ 2.372e-6■■■■□ 19.8
NDUFA3-213ENST00000484103 CFAP65Q6ZU64 1925 aaKnown RBP29.81■■■□□ 2.36
NDUFA3-213ENST00000484103 UGGT1Q9NYU2 1555 aa29.81■■■□□ 2.36
NDUFA3-213ENST00000484103 NLRP1Q9C000 1473 aa29.8■■■□□ 2.36
NDUFA3-213ENST00000484103 ERBINQ96RT1 1412 aa29.79■■■□□ 2.36
NDUFA3-213ENST00000484103 POLR1AO95602 1720 aaPredicted RBP29.79■■■□□ 2.36
NDUFA3-213ENST00000484103 ERVK-7P63135 1459 aa29.79■■■□□ 2.36
NDUFA3-213ENST00000484103 PPARGC1BQ86YN6 1023 aaKnown RBP29.77■■■□□ 2.36
NDUFA3-213ENST00000484103 THEMISQ8N1K5 641 aaPredicted RBP29.77■■■□□ 2.36
NDUFA3-213ENST00000484103 NEURL4Q96JN8 1562 aa29.77■■■□□ 2.36
NDUFA3-213ENST00000484103 ANKRD30AQ9BXX3 1397 aa29.77■■■□□ 2.36
NDUFA3-213ENST00000484103 SPATA31D1Q6ZQQ2 1576 aa29.76■■■□□ 2.35
NDUFA3-213ENST00000484103 ANKLE2Q86XL3 938 aa29.75■■■□□ 2.35
NDUFA3-213ENST00000484103 PRDM15P57071 1507 aaPredicted RBP29.75■■■□□ 2.35
NDUFA3-213ENST00000484103 KANK1Q14678 1352 aa29.7■■■□□ 2.35
NDUFA3-213ENST00000484103 UBAP1LF5GYI3 381 aa29.68■■■□□ 2.34
NDUFA3-213ENST00000484103 DEPDC5O75140 1603 aa29.67■■■□□ 2.34
NDUFA3-213ENST00000484103 NPHP4O75161 1426 aaPredicted RBP29.66■■■□□ 2.34
NDUFA3-213ENST00000484103 IQSEC2Q5JU85 1478 aa29.66■■■□□ 2.34
NDUFA3-213ENST00000484103 UBR1Q8IWV7 1749 aa29.62■■■□□ 2.33
NDUFA3-213ENST00000484103 ITGAEP38570 1179 aa29.61■■■□□ 2.33
NDUFA3-213ENST00000484103 ADGRL2O95490 1459 aa29.61■■■□□ 2.33
NDUFA3-213ENST00000484103 IQGAP1P46940 1657 aa29.6■■■□□ 2.33
NDUFA3-213ENST00000484103 SCAF1Q9H7N4 1312 aaKnown RBP29.6■■■□□ 2.33
NDUFA3-213ENST00000484103 ARHGAP31Q2M1Z3 1444 aa29.6■■■□□ 2.33
NDUFA3-213ENST00000484103 STAG3Q9UJ98 1225 aa29.58■■■□□ 2.33
NDUFA3-213ENST00000484103 VWDEQ8N2E2 1590 aa29.56■■■□□ 2.32
NDUFA3-213ENST00000484103 PIK3C2BO00750 1634 aa29.56■■■□□ 2.32
NDUFA3-213ENST00000484103 MED14O60244 1454 aa29.55■■■□□ 2.32
NDUFA3-213ENST00000484103 ANKRD50Q9ULJ7 1429 aa29.55■■■□□ 2.32
NDUFA3-213ENST00000484103 PIP4K2BP78356 416 aa29.54■■■□□ 2.32
NDUFA3-213ENST00000484103 CPS1P31327 1500 aa29.53■■■□□ 2.32
NDUFA3-213ENST00000484103 LMTK2Q8IWU2 1503 aa29.52■■■□□ 2.32
NDUFA3-213ENST00000484103 TXNDC2Q86VQ3 553 aa29.52■■■□□ 2.32
NDUFA3-213ENST00000484103 SCAF11Q99590 1463 aaKnown RBP29.51■■■□□ 2.31
NDUFA3-213ENST00000484103 LTKP29376 864 aa29.51■■■□□ 2.31
NDUFA3-213ENST00000484103 DISP3Q9P2K9 1392 aa29.51■■■□□ 2.31
NDUFA3-213ENST00000484103 EFCAB6Q5THR3 1501 aa29.5■■■□□ 2.31
NDUFA3-213ENST00000484103 SYNMO15061 1565 aa29.48■■■□□ 2.31
NDUFA3-213ENST00000484103 IDI1Q13907 227 aa29.48■■■□□ 2.31
NDUFA3-213ENST00000484103 SENP3Q9H4L4 574 aaPredicted RBP29.48■■■□□ 2.31
NDUFA3-213ENST00000484103 EID1Q9Y6B2 187 aa29.47■■■□□ 2.31
NDUFA3-213ENST00000484103 STRCP1A6NGW2 1772 aa29.45■■■□□ 2.31
NDUFA3-213ENST00000484103 SLIT1O75093 1534 aa29.45■■■□□ 2.3
NDUFA3-213ENST00000484103 ARHGAP23Q9P227 1491 aa29.44■■■□□ 2.3
NDUFA3-213ENST00000484103 TMEM2Q9UHN6 1383 aa29.42■■■□□ 2.3
NDUFA3-213ENST00000484103 NOS1P29475 1434 aa29.4■■■□□ 2.3
NDUFA3-213ENST00000484103 TOM1O60784 492 aa29.4■■■□□ 2.3
NDUFA3-213ENST00000484103 TET3O43151 1660 aa29.37■■■□□ 2.29
NDUFA3-213ENST00000484103 ADGRB3O60242 1522 aa29.36■■■□□ 2.29
NDUFA3-213ENST00000484103 LRRC7Q96NW7 1537 aa29.36■■■□□ 2.29
NDUFA3-213ENST00000484103 UNC13BO14795 1591 aa29.36■■■□□ 2.29
NDUFA3-213ENST00000484103 BCANQ96GW7 911 aa29.36■■■□□ 2.29
NDUFA3-213ENST00000484103 ROCK1Q13464 1354 aa29.35■■■□□ 2.29
NDUFA3-213ENST00000484103 CHGAP10645 457 aaKnown RBP29.34■■■□□ 2.29
NDUFA3-213ENST00000484103 HSPA1LP34931 641 aa29.34■■■□□ 2.29
NDUFA3-213ENST00000484103 SLC26A8Q96RN1 970 aa29.34■■■□□ 2.29
NDUFA3-213ENST00000484103 GCC2Q8IWJ2 1684 aa29.32■■■□□ 2.28
NDUFA3-213ENST00000484103 RPRD2Q5VT52 1461 aaKnown RBP29.31■■■□□ 2.28
NDUFA3-213ENST00000484103 SLC52A1Q9NWF4 448 aa29.31■■■□□ 2.28
NDUFA3-213ENST00000484103 KDM5AP29375 1690 aaKnown RBP29.3■■■□□ 2.28
NDUFA3-213ENST00000484103 NUP155O75694 1391 aa29.29■■■□□ 2.28
NDUFA3-213ENST00000484103 ILDR2Q71H61 639 aa29.29■■■□□ 2.28
NDUFA3-213ENST00000484103 MYO5BQ9ULV0 1848 aa29.29■■■□□ 2.28
NDUFA3-213ENST00000484103 E9PCH4 1651 aa29.28■■■□□ 2.28
NDUFA3-213ENST00000484103 ALKQ9UM73 1620 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms