RNA–Protein interactions for RNA: ENST00000484048.1

UBE2E1-209, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3

Gene UBE2E1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-209ENST00000484048 MED1Q15648 1581 aaPredicted RBP24.3■■□□□ 1.48
UBE2E1-209ENST00000484048 INO80Q9ULG1 1556 aaPredicted RBP24.3■■□□□ 1.48
UBE2E1-209ENST00000484048 CAMSAP1Q5T5Y3 1602 aa24.3■■□□□ 1.48
UBE2E1-209ENST00000484048 MYT1LQ9UL68 1186 aa24.29■■□□□ 1.48
UBE2E1-209ENST00000484048 PLXNC1O60486 1568 aa24.29■■□□□ 1.48
UBE2E1-209ENST00000484048 ROCK1Q13464 1354 aa24.29■■□□□ 1.48
UBE2E1-209ENST00000484048 AFAP1Q8N556 730 aa24.28■■□□□ 1.48
UBE2E1-209ENST00000484048 AGLP35573 1532 aa24.27■■□□□ 1.48
UBE2E1-209ENST00000484048 KIDINS220Q9ULH0 1771 aa24.26■■□□□ 1.47
UBE2E1-209ENST00000484048 TSPY4P0CV99 314 aa24.26■■□□□ 1.47
UBE2E1-209ENST00000484048 TSPY10P0CW01 314 aa24.26■■□□□ 1.47
UBE2E1-209ENST00000484048 CHIC2Q9UKJ5 165 aa24.25■■□□□ 1.47
UBE2E1-209ENST00000484048 HFM1A2PYH4 1435 aa24.25■■□□□ 1.47
UBE2E1-209ENST00000484048 CNTLNQ9NXG0 1405 aa24.25■■□□□ 1.47
UBE2E1-209ENST00000484048 ATP7AQ04656 1500 aa24.25■■□□□ 1.47
UBE2E1-209ENST00000484048 ABCA6Q8N139 1617 aa24.24■■□□□ 1.47
UBE2E1-209ENST00000484048 NCKAP5LQ9HCH0 1330 aa24.23■■□□□ 1.47
UBE2E1-209ENST00000484048 RTEL1-TNFRSF6BF6WH68 1400 aa24.23■■□□□ 1.47
UBE2E1-209ENST00000484048 MLH3Q9UHC1 1453 aa24.22■■□□□ 1.47
UBE2E1-209ENST00000484048 NPATQ14207 1427 aa24.22■■□□□ 1.47
UBE2E1-209ENST00000484048 ANKRD30AQ9BXX3 1397 aa24.22■■□□□ 1.47
UBE2E1-209ENST00000484048 NAIPQ13075 1403 aa24.21■■□□□ 1.47
UBE2E1-209ENST00000484048 SPAG9O60271 1321 aaKnown RBP24.2■■□□□ 1.46
UBE2E1-209ENST00000484048 HSPA1LP34931 641 aa24.19■■□□□ 1.46
UBE2E1-209ENST00000484048 SETD5Q9C0A6 1442 aa24.18■■□□□ 1.46
UBE2E1-209ENST00000484048 RRP7BPQ9NSQ0 103 aa24.17■■□□□ 1.46
UBE2E1-209ENST00000484048 PLA2R1Q13018 1463 aa24.16■■□□□ 1.46
UBE2E1-209ENST00000484048 PKD2Q13563 968 aa24.16■■□□□ 1.46
UBE2E1-209ENST00000484048 SCAF1Q9H7N4 1312 aaKnown RBP24.15■■□□□ 1.46
UBE2E1-209ENST00000484048 KIF15Q9NS87 1388 aa24.14■■□□□ 1.45
UBE2E1-209ENST00000484048 PHF23Q9BUL5 403 aaPredicted RBP24.13■■□□□ 1.45
UBE2E1-209ENST00000484048 DUOX2Q9NRD8 1548 aa24.13■■□□□ 1.45
UBE2E1-209ENST00000484048 PIP4K2BP78356 416 aa24.12■■□□□ 1.45
UBE2E1-209ENST00000484048 RAB3GAP2Q9H2M9 1393 aa24.12■■□□□ 1.45
UBE2E1-209ENST00000484048 MROH2AA6NES4 1674 aa24.11■■□□□ 1.45
UBE2E1-209ENST00000484048 ZMYM3Q14202 1370 aa24.09■■□□□ 1.45
UBE2E1-209ENST00000484048 PPP6R1Q9UPN7 881 aa24.09■■□□□ 1.45
UBE2E1-209ENST00000484048 ZNF142P52746 1687 aaPredicted RBP24.08■■□□□ 1.45
UBE2E1-209ENST00000484048 MYO3AQ8NEV4 1616 aa24.07■■□□□ 1.44
UBE2E1-209ENST00000484048 TOM1O60784 492 aa24.07■■□□□ 1.44
UBE2E1-209ENST00000484048 ANKRD50Q9ULJ7 1429 aa24.07■■□□□ 1.44
UBE2E1-209ENST00000484048 EIF2AK4Q9P2K8 1649 aaKnown RBP24.06■■□□□ 1.44
UBE2E1-209ENST00000484048 HRCP23327 699 aa24.06■■□□□ 1.44
UBE2E1-209ENST00000484048 CEP170BQ9Y4F5 1589 aaPredicted RBP24.05■■□□□ 1.44
UBE2E1-209ENST00000484048 ERBINQ96RT1 1412 aa24.05■■□□□ 1.44
UBE2E1-209ENST00000484048 A2MP01023 1474 aa24.02■■□□□ 1.44
UBE2E1-209ENST00000484048 CPS1P31327 1500 aa24.01■■□□□ 1.43
UBE2E1-209ENST00000484048 DHX29Q7Z478 1369 aaKnown RBP24.01■■□□□ 1.43
UBE2E1-209ENST00000484048 UNC13BO14795 1591 aa24■■□□□ 1.43
UBE2E1-209ENST00000484048 DEPDC5O75140 1603 aa23.99■■□□□ 1.43
UBE2E1-209ENST00000484048 RNF17Q9BXT8 1623 aaKnown RBP23.95■■□□□ 1.43
UBE2E1-209ENST00000484048 ACIN1Q9UKV3 1341 aaKnown RBP23.95■■□□□ 1.42
UBE2E1-209ENST00000484048 CLTCQ00610 1675 aaKnown RBP23.95■■□□□ 1.42
UBE2E1-209ENST00000484048 KDM5DQ9BY66 1539 aa23.94■■□□□ 1.42
UBE2E1-209ENST00000484048 MROH1Q8NDA8 1641 aa23.92■■□□□ 1.42
UBE2E1-209ENST00000484048 IQGAP3Q86VI3 1631 aa23.91■■□□□ 1.42
UBE2E1-209ENST00000484048 A2ML1A8K2U0 1454 aa23.9■■□□□ 1.42
UBE2E1-209ENST00000484048 PRDM15P57071 1507 aaPredicted RBP23.89■■□□□ 1.41
UBE2E1-209ENST00000484048 DHX57Q6P158 1386 aaKnown RBP23.88■■□□□ 1.41
UBE2E1-209ENST00000484048 ALKQ9UM73 1620 aa23.88■■□□□ 1.41
UBE2E1-209ENST00000484048 NEURL4Q96JN8 1562 aa23.86■■□□□ 1.41
UBE2E1-209ENST00000484048 PZPP20742 1482 aa23.86■■□□□ 1.41
UBE2E1-209ENST00000484048 VWDEQ8N2E2 1590 aa23.86■■□□□ 1.41
UBE2E1-209ENST00000484048 KIF3BO15066 747 aa23.85■■□□□ 1.41
UBE2E1-209ENST00000484048 TRIM52Q96A61 297 aa23.85■■□□□ 1.41
UBE2E1-209ENST00000484048 CEP152O94986 1710 aa23.84■■□□□ 1.41
UBE2E1-209ENST00000484048 POLR1AO95602 1720 aaPredicted RBP23.83■■□□□ 1.41
UBE2E1-209ENST00000484048 FAM135AQ9P2D6 1515 aa23.83■■□□□ 1.41
UBE2E1-209ENST00000484048 NUP155O75694 1391 aa23.82■■□□□ 1.4
UBE2E1-209ENST00000484048 GGT6Q6P531 493 aa23.82■■□□□ 1.4
UBE2E1-209ENST00000484048 ZC3H13Q5T200 1668 aaKnown RBP23.8■■□□□ 1.4
UBE2E1-209ENST00000484048 TET3O43151 1660 aa23.79■■□□□ 1.4
UBE2E1-209ENST00000484048 SENP3Q9H4L4 574 aaPredicted RBP23.79■■□□□ 1.4
UBE2E1-209ENST00000484048 RGS17Q9UGC6 210 aaPredicted RBP23.79■■□□□ 1.4
UBE2E1-209ENST00000484048 MPHOSPH9Q99550 1183 aa23.76■■□□□ 1.39
UBE2E1-209ENST00000484048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.76■■□□□ 1.391e-7■□□□□ 10.1
UBE2E1-209ENST00000484048 KANK1Q14678 1352 aa23.76■■□□□ 1.39
UBE2E1-209ENST00000484048 CCER1Q8TC90 406 aaPredicted RBP23.75■■□□□ 1.39
UBE2E1-209ENST00000484048 E9PCH4 1651 aa23.75■■□□□ 1.39
UBE2E1-209ENST00000484048 LMTK2Q8IWU2 1503 aa23.74■■□□□ 1.39
UBE2E1-209ENST00000484048 ANKLE2Q86XL3 938 aa23.73■■□□□ 1.39
UBE2E1-209ENST00000484048 SLC4A1APQ9BWU0 796 aaKnown RBP23.73■■□□□ 1.39
UBE2E1-209ENST00000484048 TNRQ92752 1358 aa23.73■■□□□ 1.39
UBE2E1-209ENST00000484048 ABCC3O15438 1527 aa23.73■■□□□ 1.39
UBE2E1-209ENST00000484048 EFCAB6Q5THR3 1501 aa23.7■■□□□ 1.38
UBE2E1-209ENST00000484048 NPHP4O75161 1426 aaPredicted RBP23.7■■□□□ 1.38
UBE2E1-209ENST00000484048 CFAP65Q6ZU64 1925 aaKnown RBP23.7■■□□□ 1.38
UBE2E1-209ENST00000484048 MED14O60244 1454 aa23.69■■□□□ 1.38
UBE2E1-209ENST00000484048 CLSPNQ9HAW4 1339 aa23.69■■□□□ 1.38
UBE2E1-209ENST00000484048 LRRC7Q96NW7 1537 aa23.69■■□□□ 1.38
UBE2E1-209ENST00000484048 SPHKAPQ2M3C7 1700 aa23.67■■□□□ 1.38
UBE2E1-209ENST00000484048 FBXO31Q5XUX0 539 aaPredicted RBP23.66■■□□□ 1.38
UBE2E1-209ENST00000484048 SYNMO15061 1565 aa23.65■■□□□ 1.38
UBE2E1-209ENST00000484048 THEMISQ8N1K5 641 aaPredicted RBP23.65■■□□□ 1.38
UBE2E1-209ENST00000484048 WASHC2CQ9Y4E1 1318 aa23.62■■□□□ 1.37
UBE2E1-209ENST00000484048 POTEAQ6S8J7 498 aa23.62■■□□□ 1.37
UBE2E1-209ENST00000484048 IQGAP1P46940 1657 aa23.61■■□□□ 1.37
UBE2E1-209ENST00000484048 FOXD1Q16676 465 aa23.61■■□□□ 1.37
UBE2E1-209ENST00000484048 ANKRD30BQ9BXX2 1392 aa23.61■■□□□ 1.37
UBE2E1-209ENST00000484048 RPRD2Q5VT52 1461 aaKnown RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms