RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 DUOX2Q9NRD8 1548 aa12.58□□□□□ -0.4
CDC42SE1-204ENST00000483763 ZFYVE16Q7Z3T8 1539 aa12.58□□□□□ -0.4
CDC42SE1-204ENST00000483763 DDX10Q13206 875 aaKnown RBP12.57□□□□□ -0.4
CDC42SE1-204ENST00000483763 RTEL1-TNFRSF6BF6WH68 1400 aa12.57□□□□□ -0.4
CDC42SE1-204ENST00000483763 ERBINQ96RT1 1412 aa12.56□□□□□ -0.4
CDC42SE1-204ENST00000483763 UNC13BO14795 1591 aa12.56□□□□□ -0.4
CDC42SE1-204ENST00000483763 PLA2R1Q13018 1463 aa12.55□□□□□ -0.4
CDC42SE1-204ENST00000483763 AEBP2Q6ZN18 517 aaPredicted RBP12.55□□□□□ -0.4
CDC42SE1-204ENST00000483763 KDM4FA0A1W2PPD8 638 aa12.54□□□□□ -0.4
CDC42SE1-204ENST00000483763 CFAP74Q9C0B2 1584 aa12.54□□□□□ -0.4
CDC42SE1-204ENST00000483763 HSPA5P11021 654 aaKnown RBP12.54□□□□□ -0.4
CDC42SE1-204ENST00000483763 MAGI2Q86UL8 1455 aa12.53□□□□□ -0.4
CDC42SE1-204ENST00000483763 ATP7AQ04656 1500 aa12.53□□□□□ -0.4
CDC42SE1-204ENST00000483763 INO80Q9ULG1 1556 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE1-204ENST00000483763 ZNF326Q5BKZ1 582 aaKnown RBP12.51□□□□□ -0.41
CDC42SE1-204ENST00000483763 IQGAP3Q86VI3 1631 aa12.51□□□□□ -0.41
CDC42SE1-204ENST00000483763 YTHDC1Q96MU7 727 aaKnown RBP12.51□□□□□ -0.41
CDC42SE1-204ENST00000483763 KIF3BO15066 747 aa12.5□□□□□ -0.41
CDC42SE1-204ENST00000483763 EIF4G2P78344 907 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDC42SE1-204ENST00000483763 NEO1Q92859 1461 aa12.5□□□□□ -0.41
CDC42SE1-204ENST00000483763 C11orf95C9JLR9 678 aaPredicted RBP12.49□□□□□ -0.41
CDC42SE1-204ENST00000483763 KDM2AQ9Y2K7 1162 aa12.49□□□□□ -0.41
CDC42SE1-204ENST00000483763 ZNF518AQ6AHZ1 1483 aa12.49□□□□□ -0.41
CDC42SE1-204ENST00000483763 DHX29Q7Z478 1369 aaKnown RBP12.48□□□□□ -0.41
CDC42SE1-204ENST00000483763 KIDINS220Q9ULH0 1771 aa12.48□□□□□ -0.41
CDC42SE1-204ENST00000483763 MLECQ14165 292 aa12.48□□□□□ -0.41
CDC42SE1-204ENST00000483763 DCAF11Q8TEB1 546 aa12.48□□□□□ -0.41
CDC42SE1-204ENST00000483763 WASHC2AQ641Q2 1341 aa12.48□□□□□ -0.41
CDC42SE1-204ENST00000483763 CCDC144AA2RUR9 1427 aa12.48□□□□□ -0.41
CDC42SE1-204ENST00000483763 POGZQ7Z3K3 1410 aa12.48□□□□□ -0.41
CDC42SE1-204ENST00000483763 RGL3Q3MIN7 710 aa12.48□□□□□ -0.41
CDC42SE1-204ENST00000483763 SPATA31E1Q6ZUB1 1445 aa12.47□□□□□ -0.41
CDC42SE1-204ENST00000483763 ARID4BQ4LE39 1312 aaPredicted RBP12.47□□□□□ -0.41
CDC42SE1-204ENST00000483763 KDM5CP41229 1560 aa12.45□□□□□ -0.42
CDC42SE1-204ENST00000483763 UHRF1BP1Q6BDS2 1440 aa12.45□□□□□ -0.42
CDC42SE1-204ENST00000483763 DEPDC5O75140 1603 aa12.44□□□□□ -0.42
CDC42SE1-204ENST00000483763 ATP10AO60312 1499 aa12.44□□□□□ -0.42
CDC42SE1-204ENST00000483763 YEATS2Q9ULM3 1422 aa12.44□□□□□ -0.42
CDC42SE1-204ENST00000483763 MLH3Q9UHC1 1453 aa12.43□□□□□ -0.42
CDC42SE1-204ENST00000483763 MROH1Q8NDA8 1641 aa12.43□□□□□ -0.42
CDC42SE1-204ENST00000483763 E9PCH4 1651 aa12.43□□□□□ -0.42
CDC42SE1-204ENST00000483763 VWDEQ8N2E2 1590 aa12.42□□□□□ -0.42
CDC42SE1-204ENST00000483763 HECW2Q9P2P5 1572 aa12.42□□□□□ -0.42
CDC42SE1-204ENST00000483763 A2MP01023 1474 aa12.42□□□□□ -0.42
CDC42SE1-204ENST00000483763 FRMPD1Q5SYB0 1578 aa12.42□□□□□ -0.42
CDC42SE1-204ENST00000483763 DAXXQ9UER7 740 aaPredicted RBP12.41□□□□□ -0.42
CDC42SE1-204ENST00000483763 USP47Q96K76 1375 aa12.41□□□□□ -0.42
CDC42SE1-204ENST00000483763 RICTORQ6R327 1708 aa12.4□□□□□ -0.42
CDC42SE1-204ENST00000483763 PRDM15P57071 1507 aaPredicted RBP12.4□□□□□ -0.42
CDC42SE1-204ENST00000483763 PRKCSHP14314 528 aaPredicted RBP12.4□□□□□ -0.42
CDC42SE1-204ENST00000483763 RALGAPBQ86X10 1494 aa12.39□□□□□ -0.43
CDC42SE1-204ENST00000483763 PTPRTO14522 1441 aa12.39□□□□□ -0.43
CDC42SE1-204ENST00000483763 NBPF1Q3BBV0 1214 aa12.39□□□□□ -0.43
CDC42SE1-204ENST00000483763 GGT6Q6P531 493 aa12.39□□□□□ -0.43
CDC42SE1-204ENST00000483763 CARD11Q9BXL7 1154 aa12.39□□□□□ -0.43
CDC42SE1-204ENST00000483763 KANK1Q14678 1352 aa12.39□□□□□ -0.43
CDC42SE1-204ENST00000483763 EIF2AK4Q9P2K8 1649 aaKnown RBP12.39□□□□□ -0.43
CDC42SE1-204ENST00000483763 PRAG1Q86YV5 1406 aa12.39□□□□□ -0.43
CDC42SE1-204ENST00000483763 KIF7Q2M1P5 1343 aa12.39□□□□□ -0.43
CDC42SE1-204ENST00000483763 CCDC7Q96M83 1385 aa12.39□□□□□ -0.43
CDC42SE1-204ENST00000483763 ABCA6Q8N139 1617 aa12.38□□□□□ -0.43
CDC42SE1-204ENST00000483763 SIGLEC1Q9BZZ2 1709 aa12.38□□□□□ -0.43
CDC42SE1-204ENST00000483763 TET3O43151 1660 aa12.37□□□□□ -0.43
CDC42SE1-204ENST00000483763 CENPBP07199 599 aaPredicted RBP12.37□□□□□ -0.43
CDC42SE1-204ENST00000483763 TRPM2O94759 1503 aa12.37□□□□□ -0.43
CDC42SE1-204ENST00000483763 ROCK2O75116 1388 aaKnown RBP12.36□□□□□ -0.43
CDC42SE1-204ENST00000483763 ST20-MTHFSA0A0A6YYL1 179 aa12.35□□□□□ -0.43
CDC42SE1-204ENST00000483763 ANP32CO43423 234 aa12.35□□□□□ -0.43
CDC42SE1-204ENST00000483763 SCAF1Q9H7N4 1312 aaKnown RBP12.35□□□□□ -0.43
CDC42SE1-204ENST00000483763 UGGT1Q9NYU2 1555 aa12.35□□□□□ -0.43
CDC42SE1-204ENST00000483763 BCORL1Q5H9F3 1711 aa12.35□□□□□ -0.43
CDC42SE1-204ENST00000483763 CEBPAP49715 358 aaPredicted RBP12.35□□□□□ -0.43
CDC42SE1-204ENST00000483763 DIP2CQ9Y2E4 1556 aa12.35□□□□□ -0.43
CDC42SE1-204ENST00000483763 CLTCL1P53675 1640 aa12.34□□□□□ -0.43
CDC42SE1-204ENST00000483763 RNF17Q9BXT8 1623 aaKnown RBP12.34□□□□□ -0.43
CDC42SE1-204ENST00000483763 SPHKAPQ2M3C7 1700 aa12.34□□□□□ -0.43
CDC42SE1-204ENST00000483763 EFCAB6Q5THR3 1501 aa12.33□□□□□ -0.43
CDC42SE1-204ENST00000483763 NPATQ14207 1427 aa12.33□□□□□ -0.44
CDC42SE1-204ENST00000483763 TRPM1Q7Z4N2 1603 aa12.32□□□□□ -0.44
CDC42SE1-204ENST00000483763 LMTK2Q8IWU2 1503 aa12.32□□□□□ -0.44
CDC42SE1-204ENST00000483763 WASHC2CQ9Y4E1 1318 aa12.32□□□□□ -0.44
CDC42SE1-204ENST00000483763 ZMYM4Q5VZL5 1548 aa12.32□□□□□ -0.44
CDC42SE1-204ENST00000483763 CNTLNQ9NXG0 1405 aa12.32□□□□□ -0.44
CDC42SE1-204ENST00000483763 CEP152O94986 1710 aa12.31□□□□□ -0.44
CDC42SE1-204ENST00000483763 GPRASP1Q5JY77 1395 aa12.3□□□□□ -0.44
CDC42SE1-204ENST00000483763 POLR3GLQ9BT43 218 aa12.3□□□□□ -0.44
CDC42SE1-204ENST00000483763 ABCC3O15438 1527 aa12.29□□□□□ -0.44
CDC42SE1-204ENST00000483763 CCER2I3L3R5 266 aa12.29□□□□□ -0.44
CDC42SE1-204ENST00000483763 NCBP3Q53F19 620 aaKnown RBP12.28□□□□□ -0.44
CDC42SE1-204ENST00000483763 CFAP65Q6ZU64 1925 aaKnown RBP12.28□□□□□ -0.44
CDC42SE1-204ENST00000483763 POLR1AO95602 1720 aaPredicted RBP12.27□□□□□ -0.45
CDC42SE1-204ENST00000483763 CCDC184Q52MB2 194 aa12.26□□□□□ -0.45
CDC42SE1-204ENST00000483763 TESK2Q96S53 571 aa12.26□□□□□ -0.45
CDC42SE1-204ENST00000483763 MADDQ8WXG6 1647 aa12.26□□□□□ -0.45
CDC42SE1-204ENST00000483763 PRKRIP1Q9H875 184 aaPredicted RBP12.26□□□□□ -0.45
CDC42SE1-204ENST00000483763 ADGRF5Q8IZF2 1346 aa12.25□□□□□ -0.45
CDC42SE1-204ENST00000483763 ARHGEF40Q8TER5 1519 aa12.25□□□□□ -0.45
CDC42SE1-204ENST00000483763 GTF3C3Q9Y5Q9 886 aa12.25□□□□□ -0.45
CDC42SE1-204ENST00000483763 CHGAP10645 457 aaKnown RBP12.23□□□□□ -0.45
CDC42SE1-204ENST00000483763 HSPA2P54652 639 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms