RNA–Protein interactions for RNA: ENST00000483732.5

TMEM254-212, Transcript of transmembrane protein 254, humanhuman

TSL 4

Gene TMEM254, Length 878 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-212ENST00000483732 TSPY10P0CW01 314 aa13.57□□□□□ -0.24
TMEM254-212ENST00000483732 ATP7AQ04656 1500 aa13.56□□□□□ -0.24
TMEM254-212ENST00000483732 MBD5Q9P267 1494 aa13.55□□□□□ -0.24
TMEM254-212ENST00000483732 CEBPAP49715 358 aaPredicted RBP13.55□□□□□ -0.24
TMEM254-212ENST00000483732 RTEL1-TNFRSF6BF6WH68 1400 aa13.55□□□□□ -0.24
TMEM254-212ENST00000483732 A2MP01023 1474 aa13.54□□□□□ -0.24
TMEM254-212ENST00000483732 CAMSAP2Q08AD1 1489 aa13.54□□□□□ -0.24
TMEM254-212ENST00000483732 CNTLNQ9NXG0 1405 aa13.53□□□□□ -0.24
TMEM254-212ENST00000483732 CCDC141Q6ZP82 1450 aa13.53□□□□□ -0.24
TMEM254-212ENST00000483732 GGT6Q6P531 493 aa13.52□□□□□ -0.25
TMEM254-212ENST00000483732 INO80Q9ULG1 1556 aaPredicted RBP13.52□□□□□ -0.25
TMEM254-212ENST00000483732 MYOM3Q5VTT5 1437 aa13.51□□□□□ -0.25
TMEM254-212ENST00000483732 MIA2Q96PC5 1412 aa13.51□□□□□ -0.25
TMEM254-212ENST00000483732 LMTK3Q96Q04 1460 aa13.5□□□□□ -0.25
TMEM254-212ENST00000483732 DHX29Q7Z478 1369 aaKnown RBP13.5□□□□□ -0.25
TMEM254-212ENST00000483732 HSPA2P54652 639 aa13.5□□□□□ -0.25
TMEM254-212ENST00000483732 ADGBQ8N7X0 1667 aa13.49□□□□□ -0.25
TMEM254-212ENST00000483732 KIF3BO15066 747 aa13.48□□□□□ -0.25
TMEM254-212ENST00000483732 SETD1BQ9UPS6 1966 aaKnown RBP13.48□□□□□ -0.25
TMEM254-212ENST00000483732 ARHGEF5Q12774 1597 aa13.48□□□□□ -0.25
TMEM254-212ENST00000483732 ZMYM3Q14202 1370 aa13.47□□□□□ -0.25
TMEM254-212ENST00000483732 UHRF1BP1Q6BDS2 1440 aa13.47□□□□□ -0.25
TMEM254-212ENST00000483732 ZBTB12Q9Y330 459 aaPredicted RBP13.46□□□□□ -0.25
TMEM254-212ENST00000483732 PLXNC1O60486 1568 aa13.45□□□□□ -0.26
TMEM254-212ENST00000483732 C3P01024 1663 aa13.44□□□□□ -0.26
TMEM254-212ENST00000483732 PREX1Q8TCU6 1659 aa13.44□□□□□ -0.26
TMEM254-212ENST00000483732 NPATQ14207 1427 aa13.43□□□□□ -0.26
TMEM254-212ENST00000483732 WASHC2CQ9Y4E1 1318 aa13.42□□□□□ -0.26
TMEM254-212ENST00000483732 MROH2AA6NES4 1674 aa13.41□□□□□ -0.26
TMEM254-212ENST00000483732 FGD6Q6ZV73 1430 aa13.4□□□□□ -0.26
TMEM254-212ENST00000483732 CLTCQ00610 1675 aaKnown RBP13.4□□□□□ -0.26
TMEM254-212ENST00000483732 MAST1Q9Y2H9 1570 aa13.39□□□□□ -0.27
TMEM254-212ENST00000483732 PTPN23Q9H3S7 1636 aa13.39□□□□□ -0.27
TMEM254-212ENST00000483732 FAM50AQ14320 339 aaKnown RBP13.38□□□□□ -0.27
TMEM254-212ENST00000483732 RRP7BPQ9NSQ0 103 aa13.38□□□□□ -0.27
TMEM254-212ENST00000483732 ILDR1Q86SU0 546 aaPredicted RBP13.37□□□□□ -0.27
TMEM254-212ENST00000483732 ABCC5O15440 1437 aa13.37□□□□□ -0.27
TMEM254-212ENST00000483732 PTPRKQ15262 1439 aa13.37□□□□□ -0.27
TMEM254-212ENST00000483732 FAM135AQ9P2D6 1515 aa13.36□□□□□ -0.27
TMEM254-212ENST00000483732 CHIC2Q9UKJ5 165 aa13.36□□□□□ -0.27
TMEM254-212ENST00000483732 TCOF1Q13428 1488 aaKnown RBP13.36□□□□□ -0.27
TMEM254-212ENST00000483732 SHANK2Q9UPX8 1470 aa13.36□□□□□ -0.27
TMEM254-212ENST00000483732 ANKRD30AQ9BXX3 1397 aa13.35□□□□□ -0.27
TMEM254-212ENST00000483732 KIF15Q9NS87 1388 aa13.35□□□□□ -0.27
TMEM254-212ENST00000483732 DUOX2Q9NRD8 1548 aa13.35□□□□□ -0.27
TMEM254-212ENST00000483732 DAPK1P53355 1430 aa13.35□□□□□ -0.27
TMEM254-212ENST00000483732 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
TMEM254-212ENST00000483732 FBXO31Q5XUX0 539 aaPredicted RBP13.33□□□□□ -0.28
TMEM254-212ENST00000483732 TNRQ92752 1358 aa13.32□□□□□ -0.28
TMEM254-212ENST00000483732 FBXO41Q8TF61 875 aa13.32□□□□□ -0.28
TMEM254-212ENST00000483732 DNMT1P26358 1616 aaKnown RBP13.31□□□□□ -0.28
TMEM254-212ENST00000483732 EIF2AK4Q9P2K8 1649 aaKnown RBP13.31□□□□□ -0.28
TMEM254-212ENST00000483732 PZPP20742 1482 aa13.31□□□□□ -0.28
TMEM254-212ENST00000483732 PKD2Q13563 968 aa13.31□□□□□ -0.28
TMEM254-212ENST00000483732 KANK1Q14678 1352 aa13.31□□□□□ -0.28
TMEM254-212ENST00000483732 PTPRTO14522 1441 aa13.3□□□□□ -0.28
TMEM254-212ENST00000483732 ERBINQ96RT1 1412 aa13.3□□□□□ -0.28
TMEM254-212ENST00000483732 NCOA1Q15788 1441 aa13.3□□□□□ -0.28
TMEM254-212ENST00000483732 RNF17Q9BXT8 1623 aaKnown RBP13.29□□□□□ -0.28
TMEM254-212ENST00000483732 CROCC2H7BZ55 1655 aa13.29□□□□□ -0.28
TMEM254-212ENST00000483732 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
TMEM254-212ENST00000483732 PPARGC1BQ86YN6 1023 aaKnown RBP13.29□□□□□ -0.28
TMEM254-212ENST00000483732 THEMISQ8N1K5 641 aaPredicted RBP13.29□□□□□ -0.28
TMEM254-212ENST00000483732 CERKQ8TCT0 537 aa13.29□□□□□ -0.28
TMEM254-212ENST00000483732 AKT1S1Q96B36 256 aa13.29□□□□□ -0.28
TMEM254-212ENST00000483732 NCKAP5LQ9HCH0 1330 aa13.29□□□□□ -0.28
TMEM254-212ENST00000483732 A2ML1A8K2U0 1454 aa13.29□□□□□ -0.28
TMEM254-212ENST00000483732 CAMSAP1Q5T5Y3 1602 aa13.28□□□□□ -0.28
TMEM254-212ENST00000483732 STRCQ7RTU9 1775 aa13.28□□□□□ -0.28
TMEM254-212ENST00000483732 CEP170BQ9Y4F5 1589 aaPredicted RBP13.28□□□□□ -0.28
TMEM254-212ENST00000483732 MYO3AQ8NEV4 1616 aa13.28□□□□□ -0.28
TMEM254-212ENST00000483732 ABCC3O15438 1527 aa13.27□□□□□ -0.29
TMEM254-212ENST00000483732 ZC3H13Q5T200 1668 aaKnown RBP13.26□□□□□ -0.29
TMEM254-212ENST00000483732 ZNF142P52746 1687 aaPredicted RBP13.25□□□□□ -0.29
TMEM254-212ENST00000483732 PLA2R1Q13018 1463 aa13.25□□□□□ -0.29
TMEM254-212ENST00000483732 NLRP1Q9C000 1473 aa13.25□□□□□ -0.29
TMEM254-212ENST00000483732 ANKLE2Q86XL3 938 aa13.25□□□□□ -0.29
TMEM254-212ENST00000483732 ADGRL2O95490 1459 aa13.24□□□□□ -0.29
TMEM254-212ENST00000483732 ITGAEP38570 1179 aa13.23□□□□□ -0.29
TMEM254-212ENST00000483732 MROH1Q8NDA8 1641 aa13.22□□□□□ -0.29
TMEM254-212ENST00000483732 ARHGAP31Q2M1Z3 1444 aa13.22□□□□□ -0.29
TMEM254-212ENST00000483732 ANKRD50Q9ULJ7 1429 aa13.22□□□□□ -0.29
TMEM254-212ENST00000483732 PRDM15P57071 1507 aaPredicted RBP13.21□□□□□ -0.29
TMEM254-212ENST00000483732 ERVK-7P63135 1459 aa13.21□□□□□ -0.3
TMEM254-212ENST00000483732 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.2□□□□□ -0.3
TMEM254-212ENST00000483732 UGGT1Q9NYU2 1555 aa13.2□□□□□ -0.3
TMEM254-212ENST00000483732 CEP152O94986 1710 aa13.2□□□□□ -0.3
TMEM254-212ENST00000483732 STAG3Q9UJ98 1225 aa13.2□□□□□ -0.3
TMEM254-212ENST00000483732 SPATA31D1Q6ZQQ2 1576 aa13.2□□□□□ -0.3
TMEM254-212ENST00000483732 ROCK1Q13464 1354 aa13.2□□□□□ -0.3
TMEM254-212ENST00000483732 CFAP65Q6ZU64 1925 aaKnown RBP13.19□□□□□ -0.3
TMEM254-212ENST00000483732 DEPDC5O75140 1603 aa13.18□□□□□ -0.3
TMEM254-212ENST00000483732 ZNF335Q9H4Z2 1342 aaPredicted RBP13.16□□□□□ -0.3
TMEM254-212ENST00000483732 EID1Q9Y6B2 187 aa13.16□□□□□ -0.3
TMEM254-212ENST00000483732 LMTK2Q8IWU2 1503 aa13.16□□□□□ -0.3
TMEM254-212ENST00000483732 VWDEQ8N2E2 1590 aa13.15□□□□□ -0.3
TMEM254-212ENST00000483732 TXNDC2Q86VQ3 553 aa13.14□□□□□ -0.31
TMEM254-212ENST00000483732 SLC52A1Q9NWF4 448 aa13.14□□□□□ -0.31
TMEM254-212ENST00000483732 NPHP4O75161 1426 aaPredicted RBP13.13□□□□□ -0.31
TMEM254-212ENST00000483732 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms