RNA–Protein interactions for RNA: ENST00000483579.1

CAPN2-208, Transcript of calpain 2, human

TSL 2

Gene CAPN2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN2-208	ENST00000483579	RNF17	Q9BXT8	1623 aa	Known RBP	33.42	■■■□□ 2.94
CAPN2-208	ENST00000483579	PTPRK	Q15262	1439 aa		33.41	■■■□□ 2.94
CAPN2-208	ENST00000483579	DUOX2	Q9NRD8	1548 aa		33.41	■■■□□ 2.94
CAPN2-208	ENST00000483579	FAM135A	Q9P2D6	1515 aa		33.41	■■■□□ 2.94
CAPN2-208	ENST00000483579	STRC	Q7RTU9	1775 aa		33.41	■■■□□ 2.94
CAPN2-208	ENST00000483579	WASHC2C	Q9Y4E1	1318 aa		33.4	■■■□□ 2.94
CAPN2-208	ENST00000483579	MYO3A	Q8NEV4	1616 aa		33.39	■■■□□ 2.93
CAPN2-208	ENST00000483579	KIF15	Q9NS87	1388 aa		33.37	■■■□□ 2.93
CAPN2-208	ENST00000483579	FAM50A	Q14320	339 aa	Known RBP	33.37	■■■□□ 2.93
CAPN2-208	ENST00000483579	RRP7BP	Q9NSQ0	103 aa		33.36	■■■□□ 2.93
CAPN2-208	ENST00000483579	CHIC2	Q9UKJ5	165 aa		33.34	■■■□□ 2.93
CAPN2-208	ENST00000483579	ZNF142	P52746	1687 aa	Predicted RBP	33.33	■■■□□ 2.93
CAPN2-208	ENST00000483579	ZC3H13	Q5T200	1668 aa	Known RBP	33.32	■■■□□ 2.92
CAPN2-208	ENST00000483579	MROH1	Q8NDA8	1641 aa		33.3	■■■□□ 2.92
CAPN2-208	ENST00000483579	CEP152	O94986	1710 aa		33.3	■■■□□ 2.92
CAPN2-208	ENST00000483579	PZP	P20742	1482 aa		33.3	■■■□□ 2.92
CAPN2-208	ENST00000483579	PPARGC1B	Q86YN6	1023 aa	Known RBP	33.29	■■■□□ 2.92
CAPN2-208	ENST00000483579	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.29	■■■□□ 2.92
CAPN2-208	ENST00000483579	ERBIN	Q96RT1	1412 aa		33.28	■■■□□ 2.92
CAPN2-208	ENST00000483579	ANKRD30A	Q9BXX3	1397 aa		33.28	■■■□□ 2.92
CAPN2-208	ENST00000483579	CFAP65	Q6ZU64	1925 aa	Known RBP	33.28	■■■□□ 2.92
CAPN2-208	ENST00000483579	ABCC3	O15438	1527 aa		33.28	■■■□□ 2.92
CAPN2-208	ENST00000483579	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.27	■■■□□ 2.92
CAPN2-208	ENST00000483579	CAMSAP1	Q5T5Y3	1602 aa		33.27	■■■□□ 2.92
CAPN2-208	ENST00000483579	ILDR1	Q86SU0	546 aa	Predicted RBP	33.24	■■■□□ 2.91
CAPN2-208	ENST00000483579	DMRT2	Q9Y5R5	561 aa		33.24	■■■□□ 2.91
CAPN2-208	ENST00000483579	TNR	Q92752	1358 aa		33.22	■■■□□ 2.91
CAPN2-208	ENST00000483579	NCOA1	Q15788	1441 aa		33.22	■■■□□ 2.91
CAPN2-208	ENST00000483579	PRDM15	P57071	1507 aa	Predicted RBP	33.2	■■■□□ 2.91
CAPN2-208	ENST00000483579	ADGRL2	O95490	1459 aa		33.19	■■■□□ 2.9
CAPN2-208	ENST00000483579	DEPDC5	O75140	1603 aa		33.19	■■■□□ 2.9
CAPN2-208	ENST00000483579	A2ML1	A8K2U0	1454 aa		33.18	■■■□□ 2.9
CAPN2-208	ENST00000483579	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.16	■■■□□ 2.9
CAPN2-208	ENST00000483579	PTPRT	O14522	1441 aa		33.13	■■■□□ 2.89
CAPN2-208	ENST00000483579	PLA2R1	Q13018	1463 aa		33.11	■■■□□ 2.89
CAPN2-208	ENST00000483579	NCKAP5L	Q9HCH0	1330 aa		33.1	■■■□□ 2.89
CAPN2-208	ENST00000483579	KANK1	Q14678	1352 aa		33.09	■■■□□ 2.89
CAPN2-208	ENST00000483579	SPATA31D1	Q6ZQQ2	1576 aa		33.09	■■■□□ 2.89
CAPN2-208	ENST00000483579	ERVK-7	P63135	1459 aa		33.08	■■■□□ 2.89
CAPN2-208	ENST00000483579	NLRP1	Q9C000	1473 aa		33.07	■■■□□ 2.88
CAPN2-208	ENST00000483579	ANKRD50	Q9ULJ7	1429 aa		33.04	■■■□□ 2.88
CAPN2-208	ENST00000483579	POLR1A	O95602	1720 aa	Predicted RBP	33.04	■■■□□ 2.88
CAPN2-208	ENST00000483579	ITGAE	P38570	1179 aa		33.03	■■■□□ 2.88
CAPN2-208	ENST00000483579	FBXO41	Q8TF61	875 aa		33.03	■■■□□ 2.88
CAPN2-208	ENST00000483579	UGGT1	Q9NYU2	1555 aa		33.03	■■■□□ 2.88
CAPN2-208	ENST00000483579	PKD2	Q13563	968 aa		33.02	■■■□□ 2.88
CAPN2-208	ENST00000483579	CERK	Q8TCT0	537 aa		33.01	■■■□□ 2.87
CAPN2-208	ENST00000483579	ARHGAP31	Q2M1Z3	1444 aa		33.01	■■■□□ 2.87
CAPN2-208	ENST00000483579	VWDE	Q8N2E2	1590 aa		33	■■■□□ 2.87
CAPN2-208	ENST00000483579	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.98	■■■□□ 2.87
CAPN2-208	ENST00000483579	LMTK2	Q8IWU2	1503 aa		32.97	■■■□□ 2.87
CAPN2-208	ENST00000483579	ROCK1	Q13464	1354 aa		32.96	■■■□□ 2.87
CAPN2-208	ENST00000483579	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.96	■■■□□ 2.87
CAPN2-208	ENST00000483579	EFCAB6	Q5THR3	1501 aa		32.92	■■■□□ 2.86
CAPN2-208	ENST00000483579	UBR1	Q8IWV7	1749 aa		32.91	■■■□□ 2.86
CAPN2-208	ENST00000483579	NEURL4	Q96JN8	1562 aa		32.9	■■■□□ 2.86
CAPN2-208	ENST00000483579	LTBP4	Q8N2S1	1624 aa		32.89	■■■□□ 2.86
CAPN2-208	ENST00000483579	UNC13B	O14795	1591 aa		32.89	■■■□□ 2.86
CAPN2-208	ENST00000483579	RRBP1	Q9P2E9	1410 aa	Known RBP	32.89	■■■□□ 2.86
CAPN2-208	ENST00000483579	ANKLE2	Q86XL3	938 aa		32.88	■■■□□ 2.85
CAPN2-208	ENST00000483579	TET3	O43151	1660 aa		32.85	■■■□□ 2.85
CAPN2-208	ENST00000483579	PIK3C2B	O00750	1634 aa		32.84	■■■□□ 2.85
CAPN2-208	ENST00000483579	GCC2	Q8IWJ2	1684 aa		32.84	■■■□□ 2.85
CAPN2-208	ENST00000483579	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.83	■■■□□ 2.85
CAPN2-208	ENST00000483579	SYNM	O15061	1565 aa		32.81	■■■□□ 2.84
CAPN2-208	ENST00000483579	IQGAP1	P46940	1657 aa		32.78	■■■□□ 2.84
CAPN2-208	ENST00000483579	RPRD2	Q5VT52	1461 aa	Known RBP	32.77	■■■□□ 2.84
CAPN2-208	ENST00000483579	IQGAP3	Q86VI3	1631 aa		32.77	■■■□□ 2.84
CAPN2-208	ENST00000483579	NPHP4	O75161	1426 aa	Predicted RBP	32.77	■■■□□ 2.84
CAPN2-208	ENST00000483579	NOS1	P29475	1434 aa		32.77	■■■□□ 2.84
CAPN2-208	ENST00000483579	MED14	O60244	1454 aa		32.76	■■■□□ 2.84
CAPN2-208	ENST00000483579	STAG3	Q9UJ98	1225 aa		32.76	■■■□□ 2.83
CAPN2-208	ENST00000483579		E9PCH4	1651 aa		32.73	■■■□□ 2.83
CAPN2-208	ENST00000483579	KDM5A	P29375	1690 aa	Known RBP	32.73	■■■□□ 2.83
CAPN2-208	ENST00000483579	IDI1	Q13907	227 aa		32.73	■■■□□ 2.83
CAPN2-208	ENST00000483579	SLIT1	O75093	1534 aa		32.71	■■■□□ 2.83
CAPN2-208	ENST00000483579	NUP155	O75694	1391 aa		32.7	■■■□□ 2.83
CAPN2-208	ENST00000483579	IQSEC2	Q5JU85	1478 aa		32.69	■■■□□ 2.82
CAPN2-208	ENST00000483579	SCAF11	Q99590	1463 aa	Known RBP	32.69	■■■□□ 2.82
CAPN2-208	ENST00000483579	ARHGAP23	Q9P227	1491 aa		32.69	■■■□□ 2.82
CAPN2-208	ENST00000483579	MYO5B	Q9ULV0	1848 aa		32.67	■■■□□ 2.82
CAPN2-208	ENST00000483579	ADGRB3	O60242	1522 aa		32.67	■■■□□ 2.82
CAPN2-208	ENST00000483579	TXNDC2	Q86VQ3	553 aa		32.66	■■■□□ 2.82
CAPN2-208	ENST00000483579	SLC52A1	Q9NWF4	448 aa		32.66	■■■□□ 2.82
CAPN2-208	ENST00000483579	LTK	P29376	864 aa		32.64	■■■□□ 2.82
CAPN2-208	ENST00000483579	EID1	Q9Y6B2	187 aa		32.64	■■■□□ 2.82
CAPN2-208	ENST00000483579	TMEM2	Q9UHN6	1383 aa		32.63	■■■□□ 2.81
CAPN2-208	ENST00000483579	NAIP	Q13075	1403 aa		32.62	■■■□□ 2.81
CAPN2-208	ENST00000483579	CPS1	P31327	1500 aa		32.6	■■■□□ 2.81
CAPN2-208	ENST00000483579	STRCP1	A6NGW2	1772 aa		32.57	■■■□□ 2.8
CAPN2-208	ENST00000483579	HFM1	A2PYH4	1435 aa		32.54	■■■□□ 2.8
CAPN2-208	ENST00000483579	TMEM131L	A2VDJ0	1609 aa		32.54	■■■□□ 2.8
CAPN2-208	ENST00000483579	SPHKAP	Q2M3C7	1700 aa		32.53	■■■□□ 2.8
CAPN2-208	ENST00000483579	CHGA	P10645	457 aa	Known RBP	32.51	■■■□□ 2.79
CAPN2-208	ENST00000483579	UBAP1L	F5GYI3	381 aa		32.49	■■■□□ 2.79
CAPN2-208	ENST00000483579	TRIM52	Q96A61	297 aa		32.45	■■■□□ 2.79
CAPN2-208	ENST00000483579	ZFYVE9	O95405	1425 aa		32.43	■■■□□ 2.78
CAPN2-208	ENST00000483579	RIMS2	Q9UQ26	1411 aa		32.43	■■■□□ 2.78
CAPN2-208	ENST00000483579	BCAN	Q96GW7	911 aa		32.42	■■■□□ 2.78
CAPN2-208	ENST00000483579	PPP1R15A	O75807	674 aa	Predicted RBP	32.4	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms