RNA–Protein interactions for RNA: ENST00000483563.5

ARRDC1-209, Transcript of arrestin domain containing 1, humanhuman

TSL 3

Gene ARRDC1, Length 704 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1-209ENST00000483563 TCOF1Q13428 1488 aaKnown RBP28.59■■■□□ 2.17
ARRDC1-209ENST00000483563 ARHGEF5Q12774 1597 aa28.58■■■□□ 2.17
ARRDC1-209ENST00000483563 PPP6R1Q9UPN7 881 aa28.57■■■□□ 2.16
ARRDC1-209ENST00000483563 GGT6Q6P531 493 aa28.56■■■□□ 2.16
ARRDC1-209ENST00000483563 RSPH4AQ5TD94 716 aa28.52■■■□□ 2.16
ARRDC1-209ENST00000483563 A2ML1A8K2U0 1454 aa28.49■■■□□ 2.15
ARRDC1-209ENST00000483563 DNMT1P26358 1616 aaKnown RBP28.47■■■□□ 2.15
ARRDC1-209ENST00000483563 POLR1AO95602 1720 aaPredicted RBP28.46■■■□□ 2.15
ARRDC1-209ENST00000483563 KANK4Q5T7N3 995 aaPredicted RBP28.46■■■□□ 2.15
ARRDC1-209ENST00000483563 DHX29Q7Z478 1369 aaKnown RBP28.46■■■□□ 2.15
ARRDC1-209ENST00000483563 MYOM3Q5VTT5 1437 aa28.45■■■□□ 2.15
ARRDC1-209ENST00000483563 MIA2Q96PC5 1412 aa28.44■■■□□ 2.14
ARRDC1-209ENST00000483563 MAST1Q9Y2H9 1570 aa28.44■■■□□ 2.14
ARRDC1-209ENST00000483563 APLP2Q06481 763 aa28.42■■■□□ 2.14
ARRDC1-209ENST00000483563 CPS1P31327 1500 aa28.41■■■□□ 2.14
ARRDC1-209ENST00000483563 FAM135AQ9P2D6 1515 aa28.41■■■□□ 2.14
ARRDC1-209ENST00000483563 TSPY4P0CV99 314 aa28.4■■■□□ 2.14
ARRDC1-209ENST00000483563 TSPY10P0CW01 314 aa28.4■■■□□ 2.14
ARRDC1-209ENST00000483563 KDM5DQ9BY66 1539 aa28.37■■■□□ 2.13
ARRDC1-209ENST00000483563 SCAF1Q9H7N4 1312 aaKnown RBP28.37■■■□□ 2.13
ARRDC1-209ENST00000483563 TNRQ92752 1358 aa28.37■■■□□ 2.13
ARRDC1-209ENST00000483563 CROCC2H7BZ55 1655 aa28.36■■■□□ 2.13
ARRDC1-209ENST00000483563 TOM1O60784 492 aa28.36■■■□□ 2.13
ARRDC1-209ENST00000483563 PZPP20742 1482 aa28.34■■■□□ 2.13
ARRDC1-209ENST00000483563 NEURL4Q96JN8 1562 aa28.34■■■□□ 2.13
ARRDC1-209ENST00000483563 PTPN23Q9H3S7 1636 aa28.34■■■□□ 2.13
ARRDC1-209ENST00000483563 EIF2AK4Q9P2K8 1649 aaKnown RBP28.34■■■□□ 2.13
ARRDC1-209ENST00000483563 KIF3BO15066 747 aa28.33■■■□□ 2.13
ARRDC1-209ENST00000483563 SHANK2Q9UPX8 1470 aa28.33■■■□□ 2.13
ARRDC1-209ENST00000483563 MED1Q15648 1581 aaPredicted RBP28.32■■■□□ 2.12
ARRDC1-209ENST00000483563 RNF17Q9BXT8 1623 aaKnown RBP28.32■■■□□ 2.12
ARRDC1-209ENST00000483563 PIP4K2BP78356 416 aa28.3■■■□□ 2.12
ARRDC1-209ENST00000483563 ZC3H13Q5T200 1668 aaKnown RBP28.29■■■□□ 2.12
ARRDC1-209ENST00000483563 HSPA1LP34931 641 aa28.28■■■□□ 2.12
ARRDC1-209ENST00000483563 ANKLE2Q86XL3 938 aa28.27■■■□□ 2.12
ARRDC1-209ENST00000483563 NLRP1Q9C000 1473 aa28.27■■■□□ 2.12
ARRDC1-209ENST00000483563 WASHC2CQ9Y4E1 1318 aa28.26■■■□□ 2.11
ARRDC1-209ENST00000483563 FBXO31Q5XUX0 539 aaPredicted RBP28.26■■■□□ 2.11
ARRDC1-209ENST00000483563 THEMISQ8N1K5 641 aaPredicted RBP28.25■■■□□ 2.11
ARRDC1-209ENST00000483563 DEPDC5O75140 1603 aa28.25■■■□□ 2.11
ARRDC1-209ENST00000483563 UGGT1Q9NYU2 1555 aa28.24■■■□□ 2.11
ARRDC1-209ENST00000483563 DUOX2Q9NRD8 1548 aa28.23■■■□□ 2.11
ARRDC1-209ENST00000483563 FGD6Q6ZV73 1430 aa28.22■■■□□ 2.11
ARRDC1-209ENST00000483563 VWDEQ8N2E2 1590 aa28.22■■■□□ 2.11
ARRDC1-209ENST00000483563 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.22■■■□□ 2.116e-6■■■□□ 15.6
ARRDC1-209ENST00000483563 NPHP4O75161 1426 aaPredicted RBP28.2■■■□□ 2.11
ARRDC1-209ENST00000483563 MED14O60244 1454 aa28.2■■■□□ 2.1
ARRDC1-209ENST00000483563 CEP152O94986 1710 aa28.19■■■□□ 2.1
ARRDC1-209ENST00000483563 IQGAP1P46940 1657 aa28.19■■■□□ 2.1
ARRDC1-209ENST00000483563 MROH1Q8NDA8 1641 aa28.18■■■□□ 2.1
ARRDC1-209ENST00000483563 ABCC5O15440 1437 aa28.18■■■□□ 2.1
ARRDC1-209ENST00000483563 ABCC3O15438 1527 aa28.17■■■□□ 2.1
ARRDC1-209ENST00000483563 DAPK1P53355 1430 aa28.17■■■□□ 2.1
ARRDC1-209ENST00000483563 PHF23Q9BUL5 403 aaPredicted RBP28.15■■■□□ 2.1
ARRDC1-209ENST00000483563 KIF15Q9NS87 1388 aa28.13■■■□□ 2.09
ARRDC1-209ENST00000483563 ERBINQ96RT1 1412 aa28.12■■■□□ 2.09
ARRDC1-209ENST00000483563 SYNMO15061 1565 aa28.11■■■□□ 2.09
ARRDC1-209ENST00000483563 CFAP65Q6ZU64 1925 aaKnown RBP28.11■■■□□ 2.09
ARRDC1-209ENST00000483563 PRDM15P57071 1507 aaPredicted RBP28.11■■■□□ 2.09
ARRDC1-209ENST00000483563 ALKQ9UM73 1620 aa28.07■■■□□ 2.08
ARRDC1-209ENST00000483563 STRCP1A6NGW2 1772 aa28.04■■■□□ 2.08
ARRDC1-209ENST00000483563 LRRC7Q96NW7 1537 aa28.03■■■□□ 2.08
ARRDC1-209ENST00000483563 ANKRD30AQ9BXX3 1397 aa28.03■■■□□ 2.08
ARRDC1-209ENST00000483563 RRP7BPQ9NSQ0 103 aa28.03■■■□□ 2.08
ARRDC1-209ENST00000483563 ERVK-7P63135 1459 aa28.02■■■□□ 2.08
ARRDC1-209ENST00000483563 ADGRL2O95490 1459 aa27.99■■■□□ 2.07
ARRDC1-209ENST00000483563 UBR1Q8IWV7 1749 aa27.98■■■□□ 2.07
ARRDC1-209ENST00000483563 CHIC2Q9UKJ5 165 aa27.96■■■□□ 2.07
ARRDC1-209ENST00000483563 SCAF11Q99590 1463 aaKnown RBP27.95■■■□□ 2.07
ARRDC1-209ENST00000483563 FAM50AQ14320 339 aaKnown RBP27.95■■■□□ 2.06
ARRDC1-209ENST00000483563 ARHGAP31Q2M1Z3 1444 aa27.94■■■□□ 2.06
ARRDC1-209ENST00000483563 KANK1Q14678 1352 aa27.94■■■□□ 2.06
ARRDC1-209ENST00000483563 SENP3Q9H4L4 574 aaPredicted RBP27.93■■■□□ 2.06
ARRDC1-209ENST00000483563 LMTK2Q8IWU2 1503 aa27.9■■■□□ 2.06
ARRDC1-209ENST00000483563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.89■■■□□ 2.069e-8■■■■□ 24.5
ARRDC1-209ENST00000483563 SLIT1O75093 1534 aa27.88■■■□□ 2.05
ARRDC1-209ENST00000483563 ARHGAP23Q9P227 1491 aa27.87■■■□□ 2.05
ARRDC1-209ENST00000483563 EID1Q9Y6B2 187 aa27.85■■■□□ 2.05
ARRDC1-209ENST00000483563 EFCAB6Q5THR3 1501 aa27.84■■■□□ 2.05
ARRDC1-209ENST00000483563 TXNDC2Q86VQ3 553 aa27.84■■■□□ 2.05
ARRDC1-209ENST00000483563 XIRP1Q702N8 1843 aaKnown RBP27.83■■■□□ 2.05
ARRDC1-209ENST00000483563 PIK3C2BO00750 1634 aa27.83■■■□□ 2.05
ARRDC1-209ENST00000483563 ANKRD50Q9ULJ7 1429 aa27.83■■■□□ 2.05
ARRDC1-209ENST00000483563 KDM5AP29375 1690 aaKnown RBP27.82■■■□□ 2.04
ARRDC1-209ENST00000483563 LTKP29376 864 aa27.79■■■□□ 2.04
ARRDC1-209ENST00000483563 TET3O43151 1660 aa27.78■■■□□ 2.04
ARRDC1-209ENST00000483563 GCC2Q8IWJ2 1684 aa27.78■■■□□ 2.04
ARRDC1-209ENST00000483563 UNC13BO14795 1591 aa27.77■■■□□ 2.04
ARRDC1-209ENST00000483563 STAG3Q9UJ98 1225 aa27.75■■■□□ 2.03
ARRDC1-209ENST00000483563 FAM135BQ49AJ0 1406 aa27.75■■■□□ 2.03
ARRDC1-209ENST00000483563 ROCK1Q13464 1354 aa27.73■■■□□ 2.03
ARRDC1-209ENST00000483563 TMEM2Q9UHN6 1383 aa27.73■■■□□ 2.03
ARRDC1-209ENST00000483563 RPRD2Q5VT52 1461 aaKnown RBP27.72■■■□□ 2.03
ARRDC1-209ENST00000483563 RGS17Q9UGC6 210 aaPredicted RBP27.71■■■□□ 2.03
ARRDC1-209ENST00000483563 NOS1P29475 1434 aa27.7■■■□□ 2.03
ARRDC1-209ENST00000483563 ADGRB3O60242 1522 aa27.68■■■□□ 2.02
ARRDC1-209ENST00000483563 TMEM94Q12767 1356 aa27.67■■■□□ 2.02
ARRDC1-209ENST00000483563 IQGAP3Q86VI3 1631 aa27.67■■■□□ 2.02
ARRDC1-209ENST00000483563 ROBO1Q9Y6N7 1651 aa27.66■■■□□ 2.02
ARRDC1-209ENST00000483563 PPARGC1BQ86YN6 1023 aaKnown RBP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms