RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 KDM5DQ9BY66 1539 aa18.96■□□□□ 0.63
HDLBP-239ENST00000483086 TSPY4P0CV99 314 aa18.96■□□□□ 0.63
HDLBP-239ENST00000483086 TSPY10P0CW01 314 aa18.96■□□□□ 0.63
HDLBP-239ENST00000483086 APLP2Q06481 763 aa18.96■□□□□ 0.63
HDLBP-239ENST00000483086 DAPK1P53355 1430 aa18.95■□□□□ 0.62
HDLBP-239ENST00000483086 SHANK2Q9UPX8 1470 aa18.95■□□□□ 0.62
HDLBP-239ENST00000483086 CEP152O94986 1710 aa18.94■□□□□ 0.62
HDLBP-239ENST00000483086 CEP170BQ9Y4F5 1589 aaPredicted RBP18.92■□□□□ 0.62
HDLBP-239ENST00000483086 CAMSAP1Q5T5Y3 1602 aa18.92■□□□□ 0.62
HDLBP-239ENST00000483086 DUOX2Q9NRD8 1548 aa18.91■□□□□ 0.62
HDLBP-239ENST00000483086 PPP6R1Q9UPN7 881 aa18.91■□□□□ 0.62
HDLBP-239ENST00000483086 CFAP65Q6ZU64 1925 aaKnown RBP18.91■□□□□ 0.62
HDLBP-239ENST00000483086 ABCC3O15438 1527 aa18.9■□□□□ 0.62
HDLBP-239ENST00000483086 FAM135AQ9P2D6 1515 aa18.9■□□□□ 0.62
HDLBP-239ENST00000483086 FBXO31Q5XUX0 539 aaPredicted RBP18.9■□□□□ 0.62
HDLBP-239ENST00000483086 NCOA1Q15788 1441 aa18.9■□□□□ 0.62
HDLBP-239ENST00000483086 PZPP20742 1482 aa18.9■□□□□ 0.62
HDLBP-239ENST00000483086 ZC3H13Q5T200 1668 aaKnown RBP18.89■□□□□ 0.61
HDLBP-239ENST00000483086 KIF15Q9NS87 1388 aa18.88■□□□□ 0.61
HDLBP-239ENST00000483086 DEPDC5O75140 1603 aa18.88■□□□□ 0.61
HDLBP-239ENST00000483086 PRDM15P57071 1507 aaPredicted RBP18.85■□□□□ 0.61
HDLBP-239ENST00000483086 WASHC2CQ9Y4E1 1318 aa18.85■□□□□ 0.61
HDLBP-239ENST00000483086 RRP7BPQ9NSQ0 103 aa18.85■□□□□ 0.61
HDLBP-239ENST00000483086 PPARGC1BQ86YN6 1023 aaKnown RBP18.84■□□□□ 0.61
HDLBP-239ENST00000483086 CHIC2Q9UKJ5 165 aa18.84■□□□□ 0.61
HDLBP-239ENST00000483086 ERBINQ96RT1 1412 aa18.83■□□□□ 0.61
HDLBP-239ENST00000483086 A2ML1A8K2U0 1454 aa18.83■□□□□ 0.6
HDLBP-239ENST00000483086 ADGRL2O95490 1459 aa18.82■□□□□ 0.6
HDLBP-239ENST00000483086 PTPRTO14522 1441 aa18.82■□□□□ 0.6
HDLBP-239ENST00000483086 TNRQ92752 1358 aa18.81■□□□□ 0.6
HDLBP-239ENST00000483086 SPATA31D1Q6ZQQ2 1576 aa18.81■□□□□ 0.6
HDLBP-239ENST00000483086 NCKAP5LQ9HCH0 1330 aa18.81■□□□□ 0.6
HDLBP-239ENST00000483086 PLA2R1Q13018 1463 aa18.8■□□□□ 0.6
HDLBP-239ENST00000483086 VWDEQ8N2E2 1590 aa18.8■□□□□ 0.6
HDLBP-239ENST00000483086 LTBP4Q8N2S1 1624 aa18.79■□□□□ 0.6
HDLBP-239ENST00000483086 NEURL4Q96JN8 1562 aa18.79■□□□□ 0.6
HDLBP-239ENST00000483086 POLR1AO95602 1720 aaPredicted RBP18.79■□□□□ 0.6
HDLBP-239ENST00000483086 ERVK-7P63135 1459 aa18.78■□□□□ 0.6
HDLBP-239ENST00000483086 FAM50AQ14320 339 aaKnown RBP18.78■□□□□ 0.6
HDLBP-239ENST00000483086 ANKRD30AQ9BXX3 1397 aa18.77■□□□□ 0.6
HDLBP-239ENST00000483086 FBXO41Q8TF61 875 aa18.76■□□□□ 0.59
HDLBP-239ENST00000483086 CERKQ8TCT0 537 aa18.75■□□□□ 0.59
HDLBP-239ENST00000483086 UBR1Q8IWV7 1749 aa18.74■□□□□ 0.59
HDLBP-239ENST00000483086 NLRP1Q9C000 1473 aa18.73■□□□□ 0.59
HDLBP-239ENST00000483086 DMRT2Q9Y5R5 561 aa18.73■□□□□ 0.59
HDLBP-239ENST00000483086 UGGT1Q9NYU2 1555 aa18.72■□□□□ 0.59
HDLBP-239ENST00000483086 LMTK2Q8IWU2 1503 aa18.72■□□□□ 0.59
HDLBP-239ENST00000483086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.71■□□□□ 0.591e-12■■□□□ 11.6
HDLBP-239ENST00000483086 ARHGAP31Q2M1Z3 1444 aa18.71■□□□□ 0.59
HDLBP-239ENST00000483086 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.7■□□□□ 0.58
HDLBP-239ENST00000483086 SYNMO15061 1565 aa18.69■□□□□ 0.58
HDLBP-239ENST00000483086 ANKRD50Q9ULJ7 1429 aa18.68■□□□□ 0.58
HDLBP-239ENST00000483086 PIK3C2BO00750 1634 aa18.68■□□□□ 0.58
HDLBP-239ENST00000483086 EFCAB6Q5THR3 1501 aa18.68■□□□□ 0.58
HDLBP-239ENST00000483086 ZNF335Q9H4Z2 1342 aaPredicted RBP18.68■□□□□ 0.58
HDLBP-239ENST00000483086 UNC13BO14795 1591 aa18.68■□□□□ 0.58
HDLBP-239ENST00000483086 PKD2Q13563 968 aa18.67■□□□□ 0.58
HDLBP-239ENST00000483086 STRCP1A6NGW2 1772 aa18.64■□□□□ 0.57
HDLBP-239ENST00000483086 TET3O43151 1660 aa18.63■□□□□ 0.57
HDLBP-239ENST00000483086 IQGAP1P46940 1657 aa18.63■□□□□ 0.57
HDLBP-239ENST00000483086 ROCK1Q13464 1354 aa18.63■□□□□ 0.57
HDLBP-239ENST00000483086 MED14O60244 1454 aa18.63■□□□□ 0.57
HDLBP-239ENST00000483086 GCC2Q8IWJ2 1684 aa18.63■□□□□ 0.57
HDLBP-239ENST00000483086 MYO5BQ9ULV0 1848 aa18.63■□□□□ 0.57
HDLBP-239ENST00000483086 NOS1P29475 1434 aa18.62■□□□□ 0.57
HDLBP-239ENST00000483086 RRBP1Q9P2E9 1410 aaKnown RBP18.62■□□□□ 0.57
HDLBP-239ENST00000483086 E9PCH4 1651 aa18.62■□□□□ 0.57
HDLBP-239ENST00000483086 KANK1Q14678 1352 aa18.61■□□□□ 0.57
HDLBP-239ENST00000483086 ARHGAP23Q9P227 1491 aa18.6■□□□□ 0.57
HDLBP-239ENST00000483086 ITGAEP38570 1179 aa18.6■□□□□ 0.57
HDLBP-239ENST00000483086 THEMISQ8N1K5 641 aaPredicted RBP18.6■□□□□ 0.57
HDLBP-239ENST00000483086 IQGAP3Q86VI3 1631 aa18.6■□□□□ 0.57
HDLBP-239ENST00000483086 SLIT1O75093 1534 aa18.59■□□□□ 0.57
HDLBP-239ENST00000483086 NPHP4O75161 1426 aaPredicted RBP18.58■□□□□ 0.57
HDLBP-239ENST00000483086 KDM5AP29375 1690 aaKnown RBP18.58■□□□□ 0.57
HDLBP-239ENST00000483086 ANKLE2Q86XL3 938 aa18.57■□□□□ 0.56
HDLBP-239ENST00000483086 LTKP29376 864 aa18.56■□□□□ 0.56
HDLBP-239ENST00000483086 IQSEC2Q5JU85 1478 aa18.56■□□□□ 0.56
HDLBP-239ENST00000483086 IDI1Q13907 227 aa18.55■□□□□ 0.56
HDLBP-239ENST00000483086 ADGRB3O60242 1522 aa18.54■□□□□ 0.56
HDLBP-239ENST00000483086 RPRD2Q5VT52 1461 aaKnown RBP18.53■□□□□ 0.56
HDLBP-239ENST00000483086 SCAF11Q99590 1463 aaKnown RBP18.53■□□□□ 0.56
HDLBP-239ENST00000483086 TMEM131LA2VDJ0 1609 aa18.51■□□□□ 0.55
HDLBP-239ENST00000483086 TMEM2Q9UHN6 1383 aa18.51■□□□□ 0.55
HDLBP-239ENST00000483086 ALKQ9UM73 1620 aa18.5■□□□□ 0.55
HDLBP-239ENST00000483086 XIRP1Q702N8 1843 aaKnown RBP18.5■□□□□ 0.55
HDLBP-239ENST00000483086 NAIPQ13075 1403 aa18.49■□□□□ 0.55
HDLBP-239ENST00000483086 CPS1P31327 1500 aa18.48■□□□□ 0.55
HDLBP-239ENST00000483086 NUP155O75694 1391 aa18.46■□□□□ 0.55
HDLBP-239ENST00000483086 TXNDC2Q86VQ3 553 aa18.46■□□□□ 0.55
HDLBP-239ENST00000483086 SPHKAPQ2M3C7 1700 aa18.46■□□□□ 0.55
HDLBP-239ENST00000483086 ZFYVE9O95405 1425 aa18.44■□□□□ 0.54
HDLBP-239ENST00000483086 LRRC7Q96NW7 1537 aa18.44■□□□□ 0.54
HDLBP-239ENST00000483086 SLC52A1Q9NWF4 448 aa18.42■□□□□ 0.54
HDLBP-239ENST00000483086 STAG3Q9UJ98 1225 aa18.4■□□□□ 0.54
HDLBP-239ENST00000483086 HFM1A2PYH4 1435 aa18.4■□□□□ 0.54
HDLBP-239ENST00000483086 UBAP1LF5GYI3 381 aa18.39■□□□□ 0.53
HDLBP-239ENST00000483086 SENP3Q9H4L4 574 aaPredicted RBP18.38■□□□□ 0.53
HDLBP-239ENST00000483086 CLTCL1P53675 1640 aa18.38■□□□□ 0.53
HDLBP-239ENST00000483086 EID1Q9Y6B2 187 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms