RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 KIF3BO15066 747 aa30.79■■■□□ 2.52
R3HDM1-215ENST00000483021 MIA2Q96PC5 1412 aa30.79■■■□□ 2.52
R3HDM1-215ENST00000483021 MYOM3Q5VTT5 1437 aa30.78■■■□□ 2.52
R3HDM1-215ENST00000483021 KANK4Q5T7N3 995 aaPredicted RBP30.76■■■□□ 2.51
R3HDM1-215ENST00000483021 PZPP20742 1482 aa30.72■■■□□ 2.51
R3HDM1-215ENST00000483021 LTBP4Q8N2S1 1624 aa30.72■■■□□ 2.51
R3HDM1-215ENST00000483021 RNF17Q9BXT8 1623 aaKnown RBP30.72■■■□□ 2.51
R3HDM1-215ENST00000483021 A2ML1A8K2U0 1454 aa30.71■■■□□ 2.51
R3HDM1-215ENST00000483021 EIF2AK4Q9P2K8 1649 aaKnown RBP30.71■■■□□ 2.51
R3HDM1-215ENST00000483021 TCOF1Q13428 1488 aaKnown RBP30.7■■■□□ 2.5
R3HDM1-215ENST00000483021 WASHC2CQ9Y4E1 1318 aa30.69■■■□□ 2.5
R3HDM1-215ENST00000483021 DNMT1P26358 1616 aaKnown RBP30.69■■■□□ 2.5
R3HDM1-215ENST00000483021 ZC3H13Q5T200 1668 aaKnown RBP30.68■■■□□ 2.5
R3HDM1-215ENST00000483021 PKD2Q13563 968 aa30.68■■■□□ 2.5
R3HDM1-215ENST00000483021 IQSEC2Q5JU85 1478 aa30.67■■■□□ 2.5
R3HDM1-215ENST00000483021 APLP2Q06481 763 aa30.66■■■□□ 2.5
R3HDM1-215ENST00000483021 TNRQ92752 1358 aa30.66■■■□□ 2.5
R3HDM1-215ENST00000483021 NCKAP5LQ9HCH0 1330 aa30.65■■■□□ 2.5
R3HDM1-215ENST00000483021 CROCC2H7BZ55 1655 aa30.64■■■□□ 2.5
R3HDM1-215ENST00000483021 POLR1AO95602 1720 aaPredicted RBP30.62■■■□□ 2.49
R3HDM1-215ENST00000483021 PTPN23Q9H3S7 1636 aa30.61■■■□□ 2.49
R3HDM1-215ENST00000483021 DUOX2Q9NRD8 1548 aa30.6■■■□□ 2.49
R3HDM1-215ENST00000483021 SHANK2Q9UPX8 1470 aa30.6■■■□□ 2.49
R3HDM1-215ENST00000483021 FBXO31Q5XUX0 539 aaPredicted RBP30.59■■■□□ 2.49
R3HDM1-215ENST00000483021 ABCC3O15438 1527 aa30.58■■■□□ 2.49
R3HDM1-215ENST00000483021 NLRP1Q9C000 1473 aa30.58■■■□□ 2.49
R3HDM1-215ENST00000483021 MROH1Q8NDA8 1641 aa30.56■■■□□ 2.48
R3HDM1-215ENST00000483021 CEP152O94986 1710 aa30.53■■■□□ 2.48
R3HDM1-215ENST00000483021 SPATA31D1Q6ZQQ2 1576 aa30.52■■■□□ 2.48
R3HDM1-215ENST00000483021 ZNF335Q9H4Z2 1342 aaPredicted RBP30.5■■■□□ 2.47
R3HDM1-215ENST00000483021 NEURL4Q96JN8 1562 aa30.5■■■□□ 2.47
R3HDM1-215ENST00000483021 UGGT1Q9NYU2 1555 aa30.5■■■□□ 2.47
R3HDM1-215ENST00000483021 ABCC5O15440 1437 aa30.5■■■□□ 2.47
R3HDM1-215ENST00000483021 FGD6Q6ZV73 1430 aa30.5■■■□□ 2.47
R3HDM1-215ENST00000483021 KIF15Q9NS87 1388 aa30.5■■■□□ 2.47
R3HDM1-215ENST00000483021 ERBINQ96RT1 1412 aa30.49■■■□□ 2.47
R3HDM1-215ENST00000483021 DAPK1P53355 1430 aa30.47■■■□□ 2.47
R3HDM1-215ENST00000483021 PRDM15P57071 1507 aaPredicted RBP30.47■■■□□ 2.47
R3HDM1-215ENST00000483021 ERVK-7P63135 1459 aa30.45■■■□□ 2.47
R3HDM1-215ENST00000483021 THEMISQ8N1K5 641 aaPredicted RBP30.45■■■□□ 2.47
R3HDM1-215ENST00000483021 DEPDC5O75140 1603 aa30.44■■■□□ 2.46
R3HDM1-215ENST00000483021 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.42■■■□□ 2.46
R3HDM1-215ENST00000483021 ANKLE2Q86XL3 938 aa30.41■■■□□ 2.46
R3HDM1-215ENST00000483021 CFAP65Q6ZU64 1925 aaKnown RBP30.4■■■□□ 2.46
R3HDM1-215ENST00000483021 MED14O60244 1454 aa30.38■■■□□ 2.45
R3HDM1-215ENST00000483021 RRP7BPQ9NSQ0 103 aa30.38■■■□□ 2.45
R3HDM1-215ENST00000483021 CPS1P31327 1500 aa30.37■■■□□ 2.45
R3HDM1-215ENST00000483021 ARHGAP31Q2M1Z3 1444 aa30.37■■■□□ 2.45
R3HDM1-215ENST00000483021 ANKRD30AQ9BXX3 1397 aa30.36■■■□□ 2.45
R3HDM1-215ENST00000483021 IQGAP1P46940 1657 aa30.36■■■□□ 2.45
R3HDM1-215ENST00000483021 UBR1Q8IWV7 1749 aa30.35■■■□□ 2.45
R3HDM1-215ENST00000483021 NPHP4O75161 1426 aaPredicted RBP30.33■■■□□ 2.45
R3HDM1-215ENST00000483021 KANK1Q14678 1352 aa30.32■■■□□ 2.44
R3HDM1-215ENST00000483021 VWDEQ8N2E2 1590 aa30.31■■■□□ 2.44
R3HDM1-215ENST00000483021 UBAP1LF5GYI3 381 aa30.3■■■□□ 2.44
R3HDM1-215ENST00000483021 ADGRL2O95490 1459 aa30.29■■■□□ 2.44
R3HDM1-215ENST00000483021 LMTK2Q8IWU2 1503 aa30.27■■■□□ 2.44
R3HDM1-215ENST00000483021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.25■■■□□ 2.43
R3HDM1-215ENST00000483021 CHIC2Q9UKJ5 165 aa30.25■■■□□ 2.43
R3HDM1-215ENST00000483021 SLIT1O75093 1534 aa30.22■■■□□ 2.43
R3HDM1-215ENST00000483021 KDM5AP29375 1690 aaKnown RBP30.21■■■□□ 2.43
R3HDM1-215ENST00000483021 SCAF11Q99590 1463 aaKnown RBP30.21■■■□□ 2.43
R3HDM1-215ENST00000483021 PIK3C2BO00750 1634 aa30.21■■■□□ 2.43
R3HDM1-215ENST00000483021 DISP3Q9P2K9 1392 aa30.2■■■□□ 2.43
R3HDM1-215ENST00000483021 ARHGAP23Q9P227 1491 aa30.19■■■□□ 2.42
R3HDM1-215ENST00000483021 FAM50AQ14320 339 aaKnown RBP30.19■■■□□ 2.42
R3HDM1-215ENST00000483021 EFCAB6Q5THR3 1501 aa30.18■■■□□ 2.42
R3HDM1-215ENST00000483021 SYNMO15061 1565 aa30.17■■■□□ 2.42
R3HDM1-215ENST00000483021 STRCP1A6NGW2 1772 aa30.15■■■□□ 2.42
R3HDM1-215ENST00000483021 TOM1O60784 492 aa30.13■■■□□ 2.41
R3HDM1-215ENST00000483021 ANKRD50Q9ULJ7 1429 aa30.13■■■□□ 2.41
R3HDM1-215ENST00000483021 EID1Q9Y6B2 187 aa30.09■■■□□ 2.41
R3HDM1-215ENST00000483021 RPRD2Q5VT52 1461 aaKnown RBP30.08■■■□□ 2.41
R3HDM1-215ENST00000483021 NOS1P29475 1434 aa30.08■■■□□ 2.41
R3HDM1-215ENST00000483021 TXNDC2Q86VQ3 553 aa30.08■■■□□ 2.41
R3HDM1-215ENST00000483021 STAG3Q9UJ98 1225 aa30.08■■■□□ 2.41
R3HDM1-215ENST00000483021 TMEM2Q9UHN6 1383 aa30.07■■■□□ 2.4
R3HDM1-215ENST00000483021 LTKP29376 864 aa30.07■■■□□ 2.4
R3HDM1-215ENST00000483021 TET3O43151 1660 aa30.07■■■□□ 2.4
R3HDM1-215ENST00000483021 LRRC7Q96NW7 1537 aa30.06■■■□□ 2.4
R3HDM1-215ENST00000483021 SCAF1Q9H7N4 1312 aaKnown RBP30.05■■■□□ 2.4
R3HDM1-215ENST00000483021 UNC13BO14795 1591 aa30.05■■■□□ 2.4
R3HDM1-215ENST00000483021 ADGRB3O60242 1522 aa30.05■■■□□ 2.4
R3HDM1-215ENST00000483021 GCC2Q8IWJ2 1684 aa30.04■■■□□ 2.4
R3HDM1-215ENST00000483021 PIP4K2BP78356 416 aa30.03■■■□□ 2.4
R3HDM1-215ENST00000483021 IDI1Q13907 227 aa30.02■■■□□ 2.4
R3HDM1-215ENST00000483021 ALKQ9UM73 1620 aa30■■■□□ 2.39
R3HDM1-215ENST00000483021 ROCK1Q13464 1354 aa30■■■□□ 2.39
R3HDM1-215ENST00000483021 SLC52A1Q9NWF4 448 aa29.99■■■□□ 2.39
R3HDM1-215ENST00000483021 HSPA1LP34931 641 aa29.95■■■□□ 2.39
R3HDM1-215ENST00000483021 ILDR2Q71H61 639 aa29.95■■■□□ 2.39
R3HDM1-215ENST00000483021 XIRP1Q702N8 1843 aaKnown RBP29.94■■■□□ 2.38
R3HDM1-215ENST00000483021 IQGAP3Q86VI3 1631 aa29.93■■■□□ 2.38
R3HDM1-215ENST00000483021 MYO5BQ9ULV0 1848 aa29.92■■■□□ 2.38
R3HDM1-215ENST00000483021 E9PCH4 1651 aa29.9■■■□□ 2.38
R3HDM1-215ENST00000483021 TMEM131LA2VDJ0 1609 aa29.87■■■□□ 2.37
R3HDM1-215ENST00000483021 MED1Q15648 1581 aaPredicted RBP29.86■■■□□ 2.37
R3HDM1-215ENST00000483021 NWD1Q149M9 1564 aa29.83■■■□□ 2.37
R3HDM1-215ENST00000483021 ZFYVE9O95405 1425 aa29.83■■■□□ 2.37
R3HDM1-215ENST00000483021 SOCS7O14512 581 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms