RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 FAM50AQ14320 339 aaKnown RBP21.43■■□□□ 1.02
VARS-225ENST00000482996 KIF15Q9NS87 1388 aa21.43■■□□□ 1.02
VARS-225ENST00000482996 DUOX2Q9NRD8 1548 aa21.43■■□□□ 1.02
VARS-225ENST00000482996 CROCC2H7BZ55 1655 aa21.42■■□□□ 1.02
VARS-225ENST00000482996 KDM5DQ9BY66 1539 aa21.42■■□□□ 1.02
VARS-225ENST00000482996 PTPRKQ15262 1439 aa21.41■■□□□ 1.02
VARS-225ENST00000482996 RRP7BPQ9NSQ0 103 aa21.41■■□□□ 1.02
VARS-225ENST00000482996 EIF2AK4Q9P2K8 1649 aaKnown RBP21.4■■□□□ 1.02
VARS-225ENST00000482996 ANKRD30AQ9BXX3 1397 aa21.39■■□□□ 1.02
VARS-225ENST00000482996 CHIC2Q9UKJ5 165 aa21.39■■□□□ 1.01
VARS-225ENST00000482996 RNF17Q9BXT8 1623 aaKnown RBP21.38■■□□□ 1.01
VARS-225ENST00000482996 ERBINQ96RT1 1412 aa21.36■■□□□ 1.01
VARS-225ENST00000482996 DMRT2Q9Y5R5 561 aa21.35■■□□□ 1.01
VARS-225ENST00000482996 PZPP20742 1482 aa21.34■■□□□ 1.01
VARS-225ENST00000482996 PPARGC1BQ86YN6 1023 aaKnown RBP21.34■■□□□ 1.01
VARS-225ENST00000482996 NCOA1Q15788 1441 aa21.32■■□□□ 1
VARS-225ENST00000482996 TNRQ92752 1358 aa21.32■■□□□ 1
VARS-225ENST00000482996 ABCC3O15438 1527 aa21.31■■□□□ 1
VARS-225ENST00000482996 MYO3AQ8NEV4 1616 aa21.31■■□□□ 1
VARS-225ENST00000482996 FBXO31Q5XUX0 539 aaPredicted RBP21.31■■□□□ 1
VARS-225ENST00000482996 ADGRL2O95490 1459 aa21.31■■□□□ 1
VARS-225ENST00000482996 ZC3H13Q5T200 1668 aaKnown RBP21.31■■□□□ 1
VARS-225ENST00000482996 MROH1Q8NDA8 1641 aa21.29■■□□□ 1
VARS-225ENST00000482996 CEP170BQ9Y4F5 1589 aaPredicted RBP21.28■■□□□ 1
VARS-225ENST00000482996 KANK1Q14678 1352 aa21.28■■□□□ 1
VARS-225ENST00000482996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.28■■□□□ 16e-6■□□□□ 11
VARS-225ENST00000482996 STRCQ7RTU9 1775 aa21.28■■□□□ 1
VARS-225ENST00000482996 ZNF142P52746 1687 aaPredicted RBP21.28■■□□□ 1
VARS-225ENST00000482996 A2ML1A8K2U0 1454 aa21.26■□□□□ 0.99
VARS-225ENST00000482996 CAMSAP1Q5T5Y3 1602 aa21.26■□□□□ 0.99
VARS-225ENST00000482996 PRDM15P57071 1507 aaPredicted RBP21.26■□□□□ 0.99
VARS-225ENST00000482996 PTPRTO14522 1441 aa21.24■□□□□ 0.99
VARS-225ENST00000482996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.23■□□□□ 0.99
VARS-225ENST00000482996 CEP152O94986 1710 aa21.23■□□□□ 0.99
VARS-225ENST00000482996 PLA2R1Q13018 1463 aa21.22■□□□□ 0.99
VARS-225ENST00000482996 NLRP1Q9C000 1473 aa21.22■□□□□ 0.99
VARS-225ENST00000482996 PKD2Q13563 968 aa21.22■□□□□ 0.99
VARS-225ENST00000482996 DEPDC5O75140 1603 aa21.22■□□□□ 0.99
VARS-225ENST00000482996 ANKRD50Q9ULJ7 1429 aa21.21■□□□□ 0.99
VARS-225ENST00000482996 ERVK-7P63135 1459 aa21.2■□□□□ 0.98
VARS-225ENST00000482996 ITGAEP38570 1179 aa21.2■□□□□ 0.98
VARS-225ENST00000482996 NCKAP5LQ9HCH0 1330 aa21.2■□□□□ 0.98
VARS-225ENST00000482996 ROCK1Q13464 1354 aa21.2■□□□□ 0.98
VARS-225ENST00000482996 ARHGAP31Q2M1Z3 1444 aa21.2■□□□□ 0.98
VARS-225ENST00000482996 SPATA31D1Q6ZQQ2 1576 aa21.19■□□□□ 0.98
VARS-225ENST00000482996 THEMISQ8N1K5 641 aaPredicted RBP21.18■□□□□ 0.98
VARS-225ENST00000482996 LMTK2Q8IWU2 1503 aa21.15■□□□□ 0.98
VARS-225ENST00000482996 CERKQ8TCT0 537 aa21.15■□□□□ 0.98
VARS-225ENST00000482996 FBXO41Q8TF61 875 aa21.15■□□□□ 0.98
VARS-225ENST00000482996 VWDEQ8N2E2 1590 aa21.14■□□□□ 0.98
VARS-225ENST00000482996 UGGT1Q9NYU2 1555 aa21.14■□□□□ 0.97
VARS-225ENST00000482996 CFAP65Q6ZU64 1925 aaKnown RBP21.14■□□□□ 0.97
VARS-225ENST00000482996 RRBP1Q9P2E9 1410 aaKnown RBP21.13■□□□□ 0.97
VARS-225ENST00000482996 ANKLE2Q86XL3 938 aa21.11■□□□□ 0.97
VARS-225ENST00000482996 EFCAB6Q5THR3 1501 aa21.08■□□□□ 0.96
VARS-225ENST00000482996 UNC13BO14795 1591 aa21.05■□□□□ 0.96
VARS-225ENST00000482996 POLR1AO95602 1720 aaPredicted RBP21.04■□□□□ 0.96
VARS-225ENST00000482996 STAG3Q9UJ98 1225 aa21.04■□□□□ 0.96
VARS-225ENST00000482996 RPRD2Q5VT52 1461 aaKnown RBP21.03■□□□□ 0.96
VARS-225ENST00000482996 NOS1P29475 1434 aa21.02■□□□□ 0.96
VARS-225ENST00000482996 TET3O43151 1660 aa21.02■□□□□ 0.95
VARS-225ENST00000482996 ZNF335Q9H4Z2 1342 aaPredicted RBP21.02■□□□□ 0.95
VARS-225ENST00000482996 NEURL4Q96JN8 1562 aa21.02■□□□□ 0.95
VARS-225ENST00000482996 NUP155O75694 1391 aa21.01■□□□□ 0.95
VARS-225ENST00000482996 LTBP4Q8N2S1 1624 aa21.01■□□□□ 0.95
VARS-225ENST00000482996 SLC52A1Q9NWF4 448 aa21.01■□□□□ 0.95
VARS-225ENST00000482996 NPHP4O75161 1426 aaPredicted RBP21.01■□□□□ 0.95
VARS-225ENST00000482996 UBR1Q8IWV7 1749 aa21.01■□□□□ 0.95
VARS-225ENST00000482996 IDI1Q13907 227 aa21■□□□□ 0.95
VARS-225ENST00000482996 MED14O60244 1454 aa21■□□□□ 0.95
VARS-225ENST00000482996 SYNMO15061 1565 aa20.98■□□□□ 0.95
VARS-225ENST00000482996 PIK3C2BO00750 1634 aa20.97■□□□□ 0.95
VARS-225ENST00000482996 IQGAP3Q86VI3 1631 aa20.97■□□□□ 0.95
VARS-225ENST00000482996 GCC2Q8IWJ2 1684 aa20.97■□□□□ 0.95
VARS-225ENST00000482996 EID1Q9Y6B2 187 aa20.97■□□□□ 0.95
VARS-225ENST00000482996 SLIT1O75093 1534 aa20.96■□□□□ 0.95
VARS-225ENST00000482996 TXNDC2Q86VQ3 553 aa20.96■□□□□ 0.95
VARS-225ENST00000482996 IQSEC2Q5JU85 1478 aa20.95■□□□□ 0.94
VARS-225ENST00000482996 SCAF11Q99590 1463 aaKnown RBP20.95■□□□□ 0.94
VARS-225ENST00000482996 ARHGAP23Q9P227 1491 aa20.95■□□□□ 0.94
VARS-225ENST00000482996 TMEM2Q9UHN6 1383 aa20.95■□□□□ 0.94
VARS-225ENST00000482996 NAIPQ13075 1403 aa20.95■□□□□ 0.94
VARS-225ENST00000482996 KDM5AP29375 1690 aaKnown RBP20.93■□□□□ 0.94
VARS-225ENST00000482996 LTKP29376 864 aa20.93■□□□□ 0.94
VARS-225ENST00000482996 IQGAP1P46940 1657 aa20.93■□□□□ 0.94
VARS-225ENST00000482996 ADGRB3O60242 1522 aa20.91■□□□□ 0.94
VARS-225ENST00000482996 E9PCH4 1651 aa20.9■□□□□ 0.94
VARS-225ENST00000482996 HFM1A2PYH4 1435 aa20.9■□□□□ 0.94
VARS-225ENST00000482996 CPS1P31327 1500 aa20.88■□□□□ 0.93
VARS-225ENST00000482996 CHGAP10645 457 aaKnown RBP20.86■□□□□ 0.93
VARS-225ENST00000482996 HDGFP51858 240 aaKnown RBP20.85■□□□□ 0.93
VARS-225ENST00000482996 TRIM52Q96A61 297 aa20.85■□□□□ 0.93
VARS-225ENST00000482996 UBAP1LF5GYI3 381 aa20.83■□□□□ 0.93
VARS-225ENST00000482996 PPP1R15AO75807 674 aaPredicted RBP20.81■□□□□ 0.92
VARS-225ENST00000482996 BCANQ96GW7 911 aa20.81■□□□□ 0.92
VARS-225ENST00000482996 TMEM131LA2VDJ0 1609 aa20.81■□□□□ 0.92
VARS-225ENST00000482996 RIMS2Q9UQ26 1411 aa20.8■□□□□ 0.92
VARS-225ENST00000482996 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.8■□□□□ 0.92
VARS-225ENST00000482996 ZFYVE9O95405 1425 aa20.78■□□□□ 0.92
VARS-225ENST00000482996 MYO5BQ9ULV0 1848 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms