RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 SPDYE2BA6NHP3 402 aa20.23■□□□□ 0.83
COL21A1-209ENST00000482933 SPDYE6P0CI01 402 aa20.23■□□□□ 0.83
COL21A1-209ENST00000482933 CEBPAP49715 358 aaPredicted RBP20.23■□□□□ 0.83
COL21A1-209ENST00000482933 SPDYE2Q495Y8 402 aa20.23■□□□□ 0.83
COL21A1-209ENST00000482933 INO80Q9ULG1 1556 aaPredicted RBP20.22■□□□□ 0.83
COL21A1-209ENST00000482933 LRRC9Q6ZRR7 1453 aa20.21■□□□□ 0.83
COL21A1-209ENST00000482933 MBD5Q9P267 1494 aa20.21■□□□□ 0.83
COL21A1-209ENST00000482933 HSPA2P54652 639 aa20.2■□□□□ 0.82
COL21A1-209ENST00000482933 RSPH4AQ5TD94 716 aa20.2■□□□□ 0.82
COL21A1-209ENST00000482933 CNTLNQ9NXG0 1405 aa20.2■□□□□ 0.82
COL21A1-209ENST00000482933 MAP3K1Q13233 1512 aa20.2■□□□□ 0.82
COL21A1-209ENST00000482933 A2MP01023 1474 aa20.19■□□□□ 0.82
COL21A1-209ENST00000482933 PREX1Q8TCU6 1659 aa20.19■□□□□ 0.82
COL21A1-209ENST00000482933 REM2Q8IYK8 340 aaPredicted RBP20.19■□□□□ 0.82
COL21A1-209ENST00000482933 RTEL1-TNFRSF6BF6WH68 1400 aa20.18■□□□□ 0.82
COL21A1-209ENST00000482933 SETD1BQ9UPS6 1966 aaKnown RBP20.18■□□□□ 0.82
COL21A1-209ENST00000482933 MKRN4PQ13434 485 aaPredicted RBP20.17■□□□□ 0.82
COL21A1-209ENST00000482933 ILDR1Q86SU0 546 aaPredicted RBP20.17■□□□□ 0.82
COL21A1-209ENST00000482933 PLXNC1O60486 1568 aa20.16■□□□□ 0.82
COL21A1-209ENST00000482933 CAMSAP2Q08AD1 1489 aa20.16■□□□□ 0.82
COL21A1-209ENST00000482933 C3P01024 1663 aa20.16■□□□□ 0.82
COL21A1-209ENST00000482933 ADGBQ8N7X0 1667 aa20.16■□□□□ 0.82
COL21A1-209ENST00000482933 UHRF1BP1Q6BDS2 1440 aa20.15■□□□□ 0.82
COL21A1-209ENST00000482933 CCDC141Q6ZP82 1450 aa20.15■□□□□ 0.82
COL21A1-209ENST00000482933 KANK4Q5T7N3 995 aaPredicted RBP20.12■□□□□ 0.81
COL21A1-209ENST00000482933 GGT6Q6P531 493 aa20.11■□□□□ 0.81
COL21A1-209ENST00000482933 MROH2AA6NES4 1674 aa20.11■□□□□ 0.81
COL21A1-209ENST00000482933 TSPY4P0CV99 314 aa20.1■□□□□ 0.81
COL21A1-209ENST00000482933 TSPY10P0CW01 314 aa20.1■□□□□ 0.81
COL21A1-209ENST00000482933 ZMYM3Q14202 1370 aa20.1■□□□□ 0.81
COL21A1-209ENST00000482933 DHX29Q7Z478 1369 aaKnown RBP20.1■□□□□ 0.81
COL21A1-209ENST00000482933 ARHGEF5Q12774 1597 aa20.09■□□□□ 0.81
COL21A1-209ENST00000482933 MIA2Q96PC5 1412 aa20.07■□□□□ 0.8
COL21A1-209ENST00000482933 NPATQ14207 1427 aa20.06■□□□□ 0.8
COL21A1-209ENST00000482933 CLTCQ00610 1675 aaKnown RBP20.06■□□□□ 0.8
COL21A1-209ENST00000482933 MYOM3Q5VTT5 1437 aa20.05■□□□□ 0.8
COL21A1-209ENST00000482933 KIF3BO15066 747 aa20.02■□□□□ 0.8
COL21A1-209ENST00000482933 FBXO41Q8TF61 875 aa20.01■□□□□ 0.79
COL21A1-209ENST00000482933 MAST1Q9Y2H9 1570 aa19.99■□□□□ 0.79
COL21A1-209ENST00000482933 STRCQ7RTU9 1775 aa19.99■□□□□ 0.79
COL21A1-209ENST00000482933 PTPRKQ15262 1439 aa19.98■□□□□ 0.79
COL21A1-209ENST00000482933 FAM135AQ9P2D6 1515 aa19.98■□□□□ 0.79
COL21A1-209ENST00000482933 PITPNM1O00562 1244 aa19.96■□□□□ 0.79
COL21A1-209ENST00000482933 ZNF692Q9BU19 519 aaPredicted RBP19.96■□□□□ 0.79
COL21A1-209ENST00000482933 WASHC2CQ9Y4E1 1318 aa19.95■□□□□ 0.78
COL21A1-209ENST00000482933 SSUH2Q9Y2M2 353 aa19.94■□□□□ 0.78
COL21A1-209ENST00000482933 KDM5DQ9BY66 1539 aa19.94■□□□□ 0.78
COL21A1-209ENST00000482933 PTPRTO14522 1441 aa19.93■□□□□ 0.78
COL21A1-209ENST00000482933 NCOA1Q15788 1441 aa19.93■□□□□ 0.78
COL21A1-209ENST00000482933 MYO3AQ8NEV4 1616 aa19.92■□□□□ 0.78
COL21A1-209ENST00000482933 PTPN23Q9H3S7 1636 aa19.92■□□□□ 0.78
COL21A1-209ENST00000482933 CERKQ8TCT0 537 aa19.92■□□□□ 0.78
COL21A1-209ENST00000482933 CAMSAP1Q5T5Y3 1602 aa19.92■□□□□ 0.78
COL21A1-209ENST00000482933 ZNF142P52746 1687 aaPredicted RBP19.91■□□□□ 0.78
COL21A1-209ENST00000482933 EIF2AK4Q9P2K8 1649 aaKnown RBP19.9■□□□□ 0.78
COL21A1-209ENST00000482933 FGD6Q6ZV73 1430 aa19.89■□□□□ 0.78
COL21A1-209ENST00000482933 PZPP20742 1482 aa19.89■□□□□ 0.77
COL21A1-209ENST00000482933 SHANK2Q9UPX8 1470 aa19.89■□□□□ 0.77
COL21A1-209ENST00000482933 CEP170BQ9Y4F5 1589 aaPredicted RBP19.89■□□□□ 0.77
COL21A1-209ENST00000482933 RNF17Q9BXT8 1623 aaKnown RBP19.88■□□□□ 0.77
COL21A1-209ENST00000482933 ABCC5O15440 1437 aa19.88■□□□□ 0.77
COL21A1-209ENST00000482933 TCOF1Q13428 1488 aaKnown RBP19.88■□□□□ 0.77
COL21A1-209ENST00000482933 DUOX2Q9NRD8 1548 aa19.88■□□□□ 0.77
COL21A1-209ENST00000482933 PLA2R1Q13018 1463 aa19.87■□□□□ 0.77
COL21A1-209ENST00000482933 CROCC2H7BZ55 1655 aa19.86■□□□□ 0.77
COL21A1-209ENST00000482933 PKD2Q13563 968 aa19.85■□□□□ 0.77
COL21A1-209ENST00000482933 TNRQ92752 1358 aa19.85■□□□□ 0.77
COL21A1-209ENST00000482933 DAPK1P53355 1430 aa19.85■□□□□ 0.77
COL21A1-209ENST00000482933 A2ML1A8K2U0 1454 aa19.85■□□□□ 0.77
COL21A1-209ENST00000482933 ZC3H13Q5T200 1668 aaKnown RBP19.85■□□□□ 0.77
COL21A1-209ENST00000482933 DNMT1P26358 1616 aaKnown RBP19.85■□□□□ 0.77
COL21A1-209ENST00000482933 KIF15Q9NS87 1388 aa19.85■□□□□ 0.77
COL21A1-209ENST00000482933 FBXO31Q5XUX0 539 aaPredicted RBP19.85■□□□□ 0.77
COL21A1-209ENST00000482933 NCKAP5LQ9HCH0 1330 aa19.83■□□□□ 0.76
COL21A1-209ENST00000482933 ERBINQ96RT1 1412 aa19.82■□□□□ 0.76
COL21A1-209ENST00000482933 PIP4P2Q8N4L2 257 aa19.82■□□□□ 0.76
COL21A1-209ENST00000482933 RRP7BPQ9NSQ0 103 aa19.82■□□□□ 0.76
COL21A1-209ENST00000482933 ABCC3O15438 1527 aa19.82■□□□□ 0.76
COL21A1-209ENST00000482933 SPDYE1Q8NFV5 336 aaPredicted RBP19.81■□□□□ 0.76
COL21A1-209ENST00000482933 ANKRD30AQ9BXX3 1397 aa19.8■□□□□ 0.76
COL21A1-209ENST00000482933 NLRP1Q9C000 1473 aa19.79■□□□□ 0.76
COL21A1-209ENST00000482933 MROH1Q8NDA8 1641 aa19.78■□□□□ 0.76
COL21A1-209ENST00000482933 FXR2P51116 673 aaKnown RBP eCLIP19.77■□□□□ 0.76
COL21A1-209ENST00000482933 CHIC2Q9UKJ5 165 aa19.77■□□□□ 0.76
COL21A1-209ENST00000482933 FAM50AQ14320 339 aaKnown RBP19.76■□□□□ 0.75
COL21A1-209ENST00000482933 THEMISQ8N1K5 641 aaPredicted RBP19.76■□□□□ 0.75
COL21A1-209ENST00000482933 SPATA31D1Q6ZQQ2 1576 aa19.75■□□□□ 0.75
COL21A1-209ENST00000482933 PRDM15P57071 1507 aaPredicted RBP19.75■□□□□ 0.75
COL21A1-209ENST00000482933 LTBP4Q8N2S1 1624 aa19.75■□□□□ 0.75
COL21A1-209ENST00000482933 CEP152O94986 1710 aa19.75■□□□□ 0.75
COL21A1-209ENST00000482933 UGGT1Q9NYU2 1555 aa19.74■□□□□ 0.75
COL21A1-209ENST00000482933 ERVK-7P63135 1459 aa19.73■□□□□ 0.75
COL21A1-209ENST00000482933 KANK1Q14678 1352 aa19.73■□□□□ 0.75
COL21A1-209ENST00000482933 ANKLE2Q86XL3 938 aa19.72■□□□□ 0.75
COL21A1-209ENST00000482933 ADGRL2O95490 1459 aa19.71■□□□□ 0.75
COL21A1-209ENST00000482933 ARHGAP31Q2M1Z3 1444 aa19.71■□□□□ 0.75
COL21A1-209ENST00000482933 IQSEC2Q5JU85 1478 aa19.71■□□□□ 0.75
COL21A1-209ENST00000482933 DEPDC5O75140 1603 aa19.71■□□□□ 0.75
COL21A1-209ENST00000482933 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.7■□□□□ 0.74
COL21A1-209ENST00000482933 POLR1AO95602 1720 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms