RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 SETD1BQ9UPS6 1966 aaKnown RBP24.4■■□□□ 1.5
COL16A1-212ENST00000482478 ZNF142P52746 1687 aaPredicted RBP24.4■■□□□ 1.5
COL16A1-212ENST00000482478 DUOX2Q9NRD8 1548 aa24.39■■□□□ 1.49
COL16A1-212ENST00000482478 ABCC5O15440 1437 aa24.38■■□□□ 1.49
COL16A1-212ENST00000482478 PTPRKQ15262 1439 aa24.38■■□□□ 1.49
COL16A1-212ENST00000482478 PPP6R1Q9UPN7 881 aa24.38■■□□□ 1.49
COL16A1-212ENST00000482478 ZC3H13Q5T200 1668 aaKnown RBP24.37■■□□□ 1.49
COL16A1-212ENST00000482478 KIF15Q9NS87 1388 aa24.37■■□□□ 1.49
COL16A1-212ENST00000482478 CEP170BQ9Y4F5 1589 aaPredicted RBP24.37■■□□□ 1.49
COL16A1-212ENST00000482478 PZPP20742 1482 aa24.34■■□□□ 1.49
COL16A1-212ENST00000482478 ABCC3O15438 1527 aa24.33■■□□□ 1.49
COL16A1-212ENST00000482478 STRCQ7RTU9 1775 aa24.33■■□□□ 1.49
COL16A1-212ENST00000482478 ERBINQ96RT1 1412 aa24.33■■□□□ 1.49
COL16A1-212ENST00000482478 WASHC2CQ9Y4E1 1318 aa24.33■■□□□ 1.48
COL16A1-212ENST00000482478 MROH1Q8NDA8 1641 aa24.32■■□□□ 1.48
COL16A1-212ENST00000482478 CAMSAP1Q5T5Y3 1602 aa24.32■■□□□ 1.48
COL16A1-212ENST00000482478 NCOA1Q15788 1441 aa24.3■■□□□ 1.48
COL16A1-212ENST00000482478 PRDM15P57071 1507 aaPredicted RBP24.3■■□□□ 1.48
COL16A1-212ENST00000482478 FAM50AQ14320 339 aaKnown RBP24.29■■□□□ 1.48
COL16A1-212ENST00000482478 CEP152O94986 1710 aa24.29■■□□□ 1.48
COL16A1-212ENST00000482478 ILDR1Q86SU0 546 aaPredicted RBP24.28■■□□□ 1.48
COL16A1-212ENST00000482478 TNRQ92752 1358 aa24.27■■□□□ 1.48
COL16A1-212ENST00000482478 ANKRD30AQ9BXX3 1397 aa24.27■■□□□ 1.48
COL16A1-212ENST00000482478 RRP7BPQ9NSQ0 103 aa24.26■■□□□ 1.47
COL16A1-212ENST00000482478 A2ML1A8K2U0 1454 aa24.25■■□□□ 1.47
COL16A1-212ENST00000482478 CHIC2Q9UKJ5 165 aa24.24■■□□□ 1.47
COL16A1-212ENST00000482478 DMRT2Q9Y5R5 561 aa24.23■■□□□ 1.47
COL16A1-212ENST00000482478 DEPDC5O75140 1603 aa24.23■■□□□ 1.47
COL16A1-212ENST00000482478 ADGRL2O95490 1459 aa24.22■■□□□ 1.47
COL16A1-212ENST00000482478 PLA2R1Q13018 1463 aa24.22■■□□□ 1.47
COL16A1-212ENST00000482478 PTPRTO14522 1441 aa24.2■■□□□ 1.46
COL16A1-212ENST00000482478 FBXO31Q5XUX0 539 aaPredicted RBP24.19■■□□□ 1.46
COL16A1-212ENST00000482478 SPATA31D1Q6ZQQ2 1576 aa24.19■■□□□ 1.46
COL16A1-212ENST00000482478 ERVK-7P63135 1459 aa24.19■■□□□ 1.46
COL16A1-212ENST00000482478 NLRP1Q9C000 1473 aa24.18■■□□□ 1.46
COL16A1-212ENST00000482478 KANK1Q14678 1352 aa24.16■■□□□ 1.46
COL16A1-212ENST00000482478 PPARGC1BQ86YN6 1023 aaKnown RBP24.15■■□□□ 1.46
COL16A1-212ENST00000482478 POLR1AO95602 1720 aaPredicted RBP24.15■■□□□ 1.46
COL16A1-212ENST00000482478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.14■■□□□ 1.45
COL16A1-212ENST00000482478 UGGT1Q9NYU2 1555 aa24.13■■□□□ 1.45
COL16A1-212ENST00000482478 FBXO41Q8TF61 875 aa24.12■■□□□ 1.45
COL16A1-212ENST00000482478 NCKAP5LQ9HCH0 1330 aa24.11■■□□□ 1.45
COL16A1-212ENST00000482478 ANKRD50Q9ULJ7 1429 aa24.1■■□□□ 1.45
COL16A1-212ENST00000482478 PKD2Q13563 968 aa24.09■■□□□ 1.45
COL16A1-212ENST00000482478 CERKQ8TCT0 537 aa24.08■■□□□ 1.45
COL16A1-212ENST00000482478 EFCAB6Q5THR3 1501 aa24.08■■□□□ 1.45
COL16A1-212ENST00000482478 LMTK2Q8IWU2 1503 aa24.08■■□□□ 1.45
COL16A1-212ENST00000482478 VWDEQ8N2E2 1590 aa24.08■■□□□ 1.44
COL16A1-212ENST00000482478 ARHGAP31Q2M1Z3 1444 aa24.07■■□□□ 1.44
COL16A1-212ENST00000482478 NEURL4Q96JN8 1562 aa24.06■■□□□ 1.44
COL16A1-212ENST00000482478 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.04■■□□□ 1.44
COL16A1-212ENST00000482478 UNC13BO14795 1591 aa24.03■■□□□ 1.44
COL16A1-212ENST00000482478 ITGAEP38570 1179 aa24.03■■□□□ 1.44
COL16A1-212ENST00000482478 LTBP4Q8N2S1 1624 aa24.02■■□□□ 1.44
COL16A1-212ENST00000482478 ROCK1Q13464 1354 aa24.02■■□□□ 1.44
COL16A1-212ENST00000482478 UBR1Q8IWV7 1749 aa24.01■■□□□ 1.43
COL16A1-212ENST00000482478 CFAP65Q6ZU64 1925 aaKnown RBP24.01■■□□□ 1.43
COL16A1-212ENST00000482478 THEMISQ8N1K5 641 aaPredicted RBP23.99■■□□□ 1.43
COL16A1-212ENST00000482478 TET3O43151 1660 aa23.98■■□□□ 1.43
COL16A1-212ENST00000482478 PIK3C2BO00750 1634 aa23.97■■□□□ 1.43
COL16A1-212ENST00000482478 IQGAP1P46940 1657 aa23.97■■□□□ 1.43
COL16A1-212ENST00000482478 ZNF335Q9H4Z2 1342 aaPredicted RBP23.97■■□□□ 1.43
COL16A1-212ENST00000482478 SYNMO15061 1565 aa23.96■■□□□ 1.43
COL16A1-212ENST00000482478 RRBP1Q9P2E9 1410 aaKnown RBP23.96■■□□□ 1.43
COL16A1-212ENST00000482478 NPHP4O75161 1426 aaPredicted RBP23.95■■□□□ 1.42
COL16A1-212ENST00000482478 GCC2Q8IWJ2 1684 aa23.95■■□□□ 1.42
COL16A1-212ENST00000482478 ANKLE2Q86XL3 938 aa23.94■■□□□ 1.42
COL16A1-212ENST00000482478 IQSEC2Q5JU85 1478 aa23.93■■□□□ 1.42
COL16A1-212ENST00000482478 RPRD2Q5VT52 1461 aaKnown RBP23.93■■□□□ 1.42
COL16A1-212ENST00000482478 IQGAP3Q86VI3 1631 aa23.92■■□□□ 1.42
COL16A1-212ENST00000482478 ADGRB3O60242 1522 aa23.91■■□□□ 1.42
COL16A1-212ENST00000482478 SCAF11Q99590 1463 aaKnown RBP23.91■■□□□ 1.42
COL16A1-212ENST00000482478 MED14O60244 1454 aa23.9■■□□□ 1.42
COL16A1-212ENST00000482478 STAG3Q9UJ98 1225 aa23.89■■□□□ 1.41
COL16A1-212ENST00000482478 NOS1P29475 1434 aa23.89■■□□□ 1.41
COL16A1-212ENST00000482478 SLIT1O75093 1534 aa23.89■■□□□ 1.41
COL16A1-212ENST00000482478 KDM5AP29375 1690 aaKnown RBP23.88■■□□□ 1.41
COL16A1-212ENST00000482478 ARHGAP23Q9P227 1491 aa23.87■■□□□ 1.41
COL16A1-212ENST00000482478 CPS1P31327 1500 aa23.86■■□□□ 1.41
COL16A1-212ENST00000482478 E9PCH4 1651 aa23.85■■□□□ 1.41
COL16A1-212ENST00000482478 NUP155O75694 1391 aa23.82■■□□□ 1.4
COL16A1-212ENST00000482478 TMEM2Q9UHN6 1383 aa23.81■■□□□ 1.4
COL16A1-212ENST00000482478 EID1Q9Y6B2 187 aa23.8■■□□□ 1.4
COL16A1-212ENST00000482478 IDI1Q13907 227 aa23.78■■□□□ 1.4
COL16A1-212ENST00000482478 TXNDC2Q86VQ3 553 aa23.77■■□□□ 1.4
COL16A1-212ENST00000482478 SLC52A1Q9NWF4 448 aa23.76■■□□□ 1.39
COL16A1-212ENST00000482478 NAIPQ13075 1403 aa23.75■■□□□ 1.39
COL16A1-212ENST00000482478 LTKP29376 864 aa23.74■■□□□ 1.39
COL16A1-212ENST00000482478 HFM1A2PYH4 1435 aa23.73■■□□□ 1.39
COL16A1-212ENST00000482478 MYO5BQ9ULV0 1848 aa23.73■■□□□ 1.39
COL16A1-212ENST00000482478 UBAP1LF5GYI3 381 aa23.72■■□□□ 1.39
COL16A1-212ENST00000482478 TMEM131LA2VDJ0 1609 aa23.72■■□□□ 1.39
COL16A1-212ENST00000482478 SPHKAPQ2M3C7 1700 aa23.72■■□□□ 1.39
COL16A1-212ENST00000482478 STRCP1A6NGW2 1772 aa23.71■■□□□ 1.39
COL16A1-212ENST00000482478 CHGAP10645 457 aaKnown RBP23.69■■□□□ 1.38
COL16A1-212ENST00000482478 PPP1R15AO75807 674 aaPredicted RBP23.67■■□□□ 1.38
COL16A1-212ENST00000482478 ZFYVE9O95405 1425 aa23.67■■□□□ 1.38
COL16A1-212ENST00000482478 RIMS2Q9UQ26 1411 aa23.67■■□□□ 1.38
COL16A1-212ENST00000482478 SCAF1Q9H7N4 1312 aaKnown RBP23.65■■□□□ 1.38
COL16A1-212ENST00000482478 LRRC7Q96NW7 1537 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms