RNA–Protein interactions for RNA: ENST00000482429.1

LTB-212, Transcript of lymphotoxin beta, humanhuman

TSL 2

Gene LTB, Length 1,388 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTB-212ENST00000482429 POLR1AO95602 1720 aaPredicted RBP33.19■■■□□ 2.9
LTB-212ENST00000482429 TNRQ92752 1358 aa33.16■■■□□ 2.9
LTB-212ENST00000482429 PZPP20742 1482 aa33.14■■■□□ 2.9
LTB-212ENST00000482429 KDM5DQ9BY66 1539 aa33.14■■■□□ 2.9
LTB-212ENST00000482429 CPS1P31327 1500 aa33.13■■■□□ 2.89
LTB-212ENST00000482429 NEURL4Q96JN8 1562 aa33.13■■■□□ 2.89
LTB-212ENST00000482429 KIF3BO15066 747 aa33.12■■■□□ 2.89
LTB-212ENST00000482429 CCDC141Q6ZP82 1450 aa33.12■■■□□ 2.89
LTB-212ENST00000482429 FBXO31Q5XUX0 539 aaPredicted RBP33.1■■■□□ 2.89
LTB-212ENST00000482429 RSPH4AQ5TD94 716 aa33.09■■■□□ 2.89
LTB-212ENST00000482429 SHANK2Q9UPX8 1470 aa33.09■■■□□ 2.89
LTB-212ENST00000482429 WASHC2CQ9Y4E1 1318 aa33.05■■■□□ 2.88
LTB-212ENST00000482429 TOM1O60784 492 aa33.05■■■□□ 2.88
LTB-212ENST00000482429 CAMSAP2Q08AD1 1489 aa33.05■■■□□ 2.88
LTB-212ENST00000482429 NLRP1Q9C000 1473 aa33.04■■■□□ 2.88
LTB-212ENST00000482429 ANKLE2Q86XL3 938 aa33.04■■■□□ 2.88
LTB-212ENST00000482429 NCOA2Q15596 1464 aa33.02■■■□□ 2.88
LTB-212ENST00000482429 MIA2Q96PC5 1412 aa33.02■■■□□ 2.88
LTB-212ENST00000482429 THEMISQ8N1K5 641 aaPredicted RBP33.02■■■□□ 2.88
LTB-212ENST00000482429 HSPA1LP34931 641 aa33.01■■■□□ 2.88
LTB-212ENST00000482429 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33■■■□□ 2.87
LTB-212ENST00000482429 DEPDC5O75140 1603 aa32.99■■■□□ 2.87
LTB-212ENST00000482429 MED14O60244 1454 aa32.99■■■□□ 2.87
LTB-212ENST00000482429 VWDEQ8N2E2 1590 aa32.99■■■□□ 2.87
LTB-212ENST00000482429 SCAF1Q9H7N4 1312 aaKnown RBP32.99■■■□□ 2.87
LTB-212ENST00000482429 ARHGEF5Q12774 1597 aa32.98■■■□□ 2.87
LTB-212ENST00000482429 UGGT1Q9NYU2 1555 aa32.98■■■□□ 2.87
LTB-212ENST00000482429 PIP4K2BP78356 416 aa32.98■■■□□ 2.87
LTB-212ENST00000482429 MED1Q15648 1581 aaPredicted RBP32.97■■■□□ 2.87
LTB-212ENST00000482429 LOC105371045A0A1W2PR82 267 aa32.96■■■□□ 2.87
LTB-212ENST00000482429 NPHP4O75161 1426 aaPredicted RBP32.94■■■□□ 2.86
LTB-212ENST00000482429 TSPY4P0CV99 314 aa32.92■■■□□ 2.86
LTB-212ENST00000482429 TSPY10P0CW01 314 aa32.92■■■□□ 2.86
LTB-212ENST00000482429 RNF17Q9BXT8 1623 aaKnown RBP32.91■■■□□ 2.86
LTB-212ENST00000482429 IQGAP1P46940 1657 aa32.88■■■□□ 2.85
LTB-212ENST00000482429 ZC3H13Q5T200 1668 aaKnown RBP32.88■■■□□ 2.85
LTB-212ENST00000482429 ALKQ9UM73 1620 aa32.86■■■□□ 2.85
LTB-212ENST00000482429 ABCC3O15438 1527 aa32.85■■■□□ 2.85
LTB-212ENST00000482429 MAST1Q9Y2H9 1570 aa32.84■■■□□ 2.85
LTB-212ENST00000482429 EIF2AK4Q9P2K8 1649 aaKnown RBP32.82■■■□□ 2.84
LTB-212ENST00000482429 STRCP1A6NGW2 1772 aa32.79■■■□□ 2.84
LTB-212ENST00000482429 ERVK-7P63135 1459 aa32.78■■■□□ 2.84
LTB-212ENST00000482429 SYNMO15061 1565 aa32.77■■■□□ 2.84
LTB-212ENST00000482429 LRRC7Q96NW7 1537 aa32.77■■■□□ 2.84
LTB-212ENST00000482429 LRRC9Q6ZRR7 1453 aa32.75■■■□□ 2.83
LTB-212ENST00000482429 MROH1Q8NDA8 1641 aa32.74■■■□□ 2.83
LTB-212ENST00000482429 UBR1Q8IWV7 1749 aa32.72■■■□□ 2.83
LTB-212ENST00000482429 PHF23Q9BUL5 403 aaPredicted RBP32.7■■■□□ 2.83
LTB-212ENST00000482429 CEP152O94986 1710 aa32.69■■■□□ 2.82
LTB-212ENST00000482429 CFAP65Q6ZU64 1925 aaKnown RBP32.69■■■□□ 2.82
LTB-212ENST00000482429 SCAF11Q99590 1463 aaKnown RBP32.66■■■□□ 2.82
LTB-212ENST00000482429 VPS8Q8N3P4 1428 aa32.66■■■□□ 2.82
LTB-212ENST00000482429 DUOX2Q9NRD8 1548 aa32.65■■■□□ 2.82
LTB-212ENST00000482429 SLIT1O75093 1534 aa32.63■■■□□ 2.81
LTB-212ENST00000482429 ARHGAP23Q9P227 1491 aa32.63■■■□□ 2.81
LTB-212ENST00000482429 MAP3K1Q13233 1512 aa32.62■■■□□ 2.81
LTB-212ENST00000482429 MYOM3Q5VTT5 1437 aa32.62■■■□□ 2.81
LTB-212ENST00000482429 ARHGAP31Q2M1Z3 1444 aa32.61■■■□□ 2.81
LTB-212ENST00000482429 PRDM15P57071 1507 aaPredicted RBP32.58■■■□□ 2.81
LTB-212ENST00000482429 LTKP29376 864 aa32.58■■■□□ 2.81
LTB-212ENST00000482429 TXNDC2Q86VQ3 553 aa32.57■■■□□ 2.8
LTB-212ENST00000482429 KANK4Q5T7N3 995 aaPredicted RBP32.55■■■□□ 2.8
LTB-212ENST00000482429 XIRP1Q702N8 1843 aaKnown RBP32.54■■■□□ 2.8
LTB-212ENST00000482429 SENP3Q9H4L4 574 aaPredicted RBP32.53■■■□□ 2.8
LTB-212ENST00000482429 ERBINQ96RT1 1412 aa32.52■■■□□ 2.8
LTB-212ENST00000482429 EID1Q9Y6B2 187 aa32.52■■■□□ 2.8
LTB-212ENST00000482429 KIF15Q9NS87 1388 aa32.52■■■□□ 2.8
LTB-212ENST00000482429 CROCC2H7BZ55 1655 aa32.49■■■□□ 2.79
LTB-212ENST00000482429 PIK3C2BO00750 1634 aa32.48■■■□□ 2.79
LTB-212ENST00000482429 KDM5AP29375 1690 aaKnown RBP32.47■■■□□ 2.79
LTB-212ENST00000482429 TMEM2Q9UHN6 1383 aa32.46■■■□□ 2.79
LTB-212ENST00000482429 ABCC5O15440 1437 aa32.44■■■□□ 2.78
LTB-212ENST00000482429 FAM135BQ49AJ0 1406 aa32.43■■■□□ 2.78
LTB-212ENST00000482429 RRP7BPQ9NSQ0 103 aa32.43■■■□□ 2.78
LTB-212ENST00000482429 RGS17Q9UGC6 210 aaPredicted RBP32.41■■■□□ 2.78
LTB-212ENST00000482429 KANK1Q14678 1352 aa32.41■■■□□ 2.78
LTB-212ENST00000482429 EFCAB6Q5THR3 1501 aa32.39■■■□□ 2.78
LTB-212ENST00000482429 PTPN23Q9H3S7 1636 aa32.38■■■□□ 2.77
LTB-212ENST00000482429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.38■■■□□ 2.77
LTB-212ENST00000482429 STAG3Q9UJ98 1225 aa32.38■■■□□ 2.77
LTB-212ENST00000482429 LMTK2Q8IWU2 1503 aa32.37■■■□□ 2.77
LTB-212ENST00000482429 DAPK1P53355 1430 aa32.35■■■□□ 2.77
LTB-212ENST00000482429 TMEM94Q12767 1356 aa32.35■■■□□ 2.77
LTB-212ENST00000482429 TET3O43151 1660 aa32.33■■■□□ 2.77
LTB-212ENST00000482429 KCNA6P17658 529 aa32.33■■■□□ 2.77
LTB-212ENST00000482429 IDI1Q13907 227 aa32.33■■■□□ 2.77
LTB-212ENST00000482429 ANKRD30AQ9BXX3 1397 aa32.28■■■□□ 2.76
LTB-212ENST00000482429 ROBO1Q9Y6N7 1651 aa32.28■■■□□ 2.76
LTB-212ENST00000482429 NOS1P29475 1434 aa32.27■■■□□ 2.76
LTB-212ENST00000482429 PROSER2Q86WR7 435 aaPredicted RBP32.26■■■□□ 2.75
LTB-212ENST00000482429 FGD6Q6ZV73 1430 aa32.26■■■□□ 2.75
LTB-212ENST00000482429 NKTRP30414 1462 aaKnown RBP32.25■■■□□ 2.75
LTB-212ENST00000482429 ADGRB3O60242 1522 aa32.25■■■□□ 2.75
LTB-212ENST00000482429 SLC26A8Q96RN1 970 aa32.25■■■□□ 2.75
LTB-212ENST00000482429 NWD1Q149M9 1564 aa32.25■■■□□ 2.75
LTB-212ENST00000482429 SLC52A1Q9NWF4 448 aa32.21■■■□□ 2.75
LTB-212ENST00000482429 APLP2Q06481 763 aa32.19■■■□□ 2.74
LTB-212ENST00000482429 POTEAQ6S8J7 498 aa32.19■■■□□ 2.74
LTB-212ENST00000482429 CHIC2Q9UKJ5 165 aa32.19■■■□□ 2.74
LTB-212ENST00000482429 MSH6P52701 1360 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms