RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 WASHC2CQ9Y4E1 1318 aa30.58■■■□□ 2.49
CHPF2-203ENST00000482173 PLA2R1Q13018 1463 aa30.57■■■□□ 2.48
CHPF2-203ENST00000482173 FBXO31Q5XUX0 539 aaPredicted RBP30.57■■■□□ 2.48
CHPF2-203ENST00000482173 MAP3K1Q13233 1512 aa30.57■■■□□ 2.48
CHPF2-203ENST00000482173 KDM5DQ9BY66 1539 aa30.54■■■□□ 2.48
CHPF2-203ENST00000482173 A2ML1A8K2U0 1454 aa30.54■■■□□ 2.48
CHPF2-203ENST00000482173 TCOF1Q13428 1488 aaKnown RBP30.52■■■□□ 2.48
CHPF2-203ENST00000482173 TNRQ92752 1358 aa30.52■■■□□ 2.48
CHPF2-203ENST00000482173 FAM135AQ9P2D6 1515 aa30.52■■■□□ 2.48
CHPF2-203ENST00000482173 PZPP20742 1482 aa30.5■■■□□ 2.47
CHPF2-203ENST00000482173 ZNF335Q9H4Z2 1342 aaPredicted RBP30.49■■■□□ 2.47
CHPF2-203ENST00000482173 MYOM3Q5VTT5 1437 aa30.49■■■□□ 2.47
CHPF2-203ENST00000482173 DNMT1P26358 1616 aaKnown RBP30.49■■■□□ 2.47
CHPF2-203ENST00000482173 MIA2Q96PC5 1412 aa30.48■■■□□ 2.47
CHPF2-203ENST00000482173 IQSEC2Q5JU85 1478 aa30.48■■■□□ 2.47
CHPF2-203ENST00000482173 MAST1Q9Y2H9 1570 aa30.46■■■□□ 2.47
CHPF2-203ENST00000482173 APLP2Q06481 763 aa30.43■■■□□ 2.46
CHPF2-203ENST00000482173 RNF17Q9BXT8 1623 aaKnown RBP30.39■■■□□ 2.46
CHPF2-203ENST00000482173 THEMISQ8N1K5 641 aaPredicted RBP30.38■■■□□ 2.45
CHPF2-203ENST00000482173 ANKLE2Q86XL3 938 aa30.35■■■□□ 2.45
CHPF2-203ENST00000482173 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.35■■■□□ 2.453e-12■□□□□ 10.4
CHPF2-203ENST00000482173 NLRP1Q9C000 1473 aa30.35■■■□□ 2.45
CHPF2-203ENST00000482173 ABCC3O15438 1527 aa30.35■■■□□ 2.45
CHPF2-203ENST00000482173 EIF2AK4Q9P2K8 1649 aaKnown RBP30.34■■■□□ 2.45
CHPF2-203ENST00000482173 POLR1AO95602 1720 aaPredicted RBP30.33■■■□□ 2.45
CHPF2-203ENST00000482173 UBAP1LF5GYI3 381 aa30.33■■■□□ 2.45
CHPF2-203ENST00000482173 ZC3H13Q5T200 1668 aaKnown RBP30.31■■■□□ 2.44
CHPF2-203ENST00000482173 UGGT1Q9NYU2 1555 aa30.31■■■□□ 2.44
CHPF2-203ENST00000482173 DUOX2Q9NRD8 1548 aa30.31■■■□□ 2.44
CHPF2-203ENST00000482173 NEURL4Q96JN8 1562 aa30.3■■■□□ 2.44
CHPF2-203ENST00000482173 DISP3Q9P2K9 1392 aa30.29■■■□□ 2.44
CHPF2-203ENST00000482173 ABCC5O15440 1437 aa30.29■■■□□ 2.44
CHPF2-203ENST00000482173 RRP7BPQ9NSQ0 103 aa30.28■■■□□ 2.44
CHPF2-203ENST00000482173 MROH1Q8NDA8 1641 aa30.28■■■□□ 2.44
CHPF2-203ENST00000482173 PTPN23Q9H3S7 1636 aa30.28■■■□□ 2.44
CHPF2-203ENST00000482173 KIF15Q9NS87 1388 aa30.28■■■□□ 2.44
CHPF2-203ENST00000482173 SPATA31D1Q6ZQQ2 1576 aa30.25■■■□□ 2.43
CHPF2-203ENST00000482173 CEP152O94986 1710 aa30.24■■■□□ 2.43
CHPF2-203ENST00000482173 ERVK-7P63135 1459 aa30.24■■■□□ 2.43
CHPF2-203ENST00000482173 SHANK2Q9UPX8 1470 aa30.24■■■□□ 2.43
CHPF2-203ENST00000482173 CFAP65Q6ZU64 1925 aaKnown RBP30.23■■■□□ 2.43
CHPF2-203ENST00000482173 CROCC2H7BZ55 1655 aa30.22■■■□□ 2.43
CHPF2-203ENST00000482173 NPHP4O75161 1426 aaPredicted RBP30.21■■■□□ 2.43
CHPF2-203ENST00000482173 DAPK1P53355 1430 aa30.21■■■□□ 2.43
CHPF2-203ENST00000482173 FGD6Q6ZV73 1430 aa30.21■■■□□ 2.43
CHPF2-203ENST00000482173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.19■■■□□ 2.426e-6■□□□□ 8.3
CHPF2-203ENST00000482173 ERBINQ96RT1 1412 aa30.19■■■□□ 2.42
CHPF2-203ENST00000482173 MED14O60244 1454 aa30.19■■■□□ 2.42
CHPF2-203ENST00000482173 DEPDC5O75140 1603 aa30.18■■■□□ 2.42
CHPF2-203ENST00000482173 CPS1P31327 1500 aa30.18■■■□□ 2.42
CHPF2-203ENST00000482173 CHIC2Q9UKJ5 165 aa30.17■■■□□ 2.42
CHPF2-203ENST00000482173 PRDM15P57071 1507 aaPredicted RBP30.14■■■□□ 2.42
CHPF2-203ENST00000482173 VWDEQ8N2E2 1590 aa30.13■■■□□ 2.41
CHPF2-203ENST00000482173 ILDR2Q71H61 639 aa30.13■■■□□ 2.41
CHPF2-203ENST00000482173 ARHGAP31Q2M1Z3 1444 aa30.13■■■□□ 2.41
CHPF2-203ENST00000482173 ANKRD30AQ9BXX3 1397 aa30.12■■■□□ 2.41
CHPF2-203ENST00000482173 IQGAP1P46940 1657 aa30.11■■■□□ 2.41
CHPF2-203ENST00000482173 TOM1O60784 492 aa30.11■■■□□ 2.41
CHPF2-203ENST00000482173 KANK1Q14678 1352 aa30.11■■■□□ 2.41
CHPF2-203ENST00000482173 SCAF1Q9H7N4 1312 aaKnown RBP30.1■■■□□ 2.41
CHPF2-203ENST00000482173 PIP4K2BP78356 416 aa30.09■■■□□ 2.41
CHPF2-203ENST00000482173 UBR1Q8IWV7 1749 aa30.09■■■□□ 2.41
CHPF2-203ENST00000482173 FAM50AQ14320 339 aaKnown RBP30.04■■■□□ 2.4
CHPF2-203ENST00000482173 TXNDC2Q86VQ3 553 aa30.04■■■□□ 2.4
CHPF2-203ENST00000482173 LTKP29376 864 aa30.03■■■□□ 2.4
CHPF2-203ENST00000482173 SCAF11Q99590 1463 aaKnown RBP30.02■■■□□ 2.4
CHPF2-203ENST00000482173 HSPA1LP34931 641 aa30■■■□□ 2.39
CHPF2-203ENST00000482173 ARHGAP23Q9P227 1491 aa29.99■■■□□ 2.39
CHPF2-203ENST00000482173 STAG3Q9UJ98 1225 aa29.99■■■□□ 2.39
CHPF2-203ENST00000482173 EID1Q9Y6B2 187 aa29.99■■■□□ 2.39
CHPF2-203ENST00000482173 SLIT1O75093 1534 aa29.98■■■□□ 2.39
CHPF2-203ENST00000482173 STRCP1A6NGW2 1772 aa29.98■■■□□ 2.39
CHPF2-203ENST00000482173 LMTK2Q8IWU2 1503 aa29.96■■■□□ 2.39
CHPF2-203ENST00000482173 PIK3C2BO00750 1634 aa29.96■■■□□ 2.39
CHPF2-203ENST00000482173 ADGRL2O95490 1459 aa29.96■■■□□ 2.39
CHPF2-203ENST00000482173 IDI1Q13907 227 aa29.95■■■□□ 2.39
CHPF2-203ENST00000482173 LRRC7Q96NW7 1537 aa29.95■■■□□ 2.38
CHPF2-203ENST00000482173 SOCS7O14512 581 aa29.94■■■□□ 2.38
CHPF2-203ENST00000482173 TMEM2Q9UHN6 1383 aa29.92■■■□□ 2.38
CHPF2-203ENST00000482173 ALKQ9UM73 1620 aa29.89■■■□□ 2.37
CHPF2-203ENST00000482173 ANKRD50Q9ULJ7 1429 aa29.88■■■□□ 2.37
CHPF2-203ENST00000482173 SYNMO15061 1565 aa29.88■■■□□ 2.37
CHPF2-203ENST00000482173 EFCAB6Q5THR3 1501 aa29.87■■■□□ 2.37
CHPF2-203ENST00000482173 NOS1P29475 1434 aa29.87■■■□□ 2.37
CHPF2-203ENST00000482173 KDM5AP29375 1690 aaKnown RBP29.85■■■□□ 2.37
CHPF2-203ENST00000482173 SLC52A1Q9NWF4 448 aa29.84■■■□□ 2.37
CHPF2-203ENST00000482173 SENP3Q9H4L4 574 aaPredicted RBP29.79■■■□□ 2.36
CHPF2-203ENST00000482173 SLC26A8Q96RN1 970 aa29.78■■■□□ 2.36
CHPF2-203ENST00000482173 RPRD2Q5VT52 1461 aaKnown RBP29.78■■■□□ 2.36
CHPF2-203ENST00000482173 ADGRB3O60242 1522 aa29.77■■■□□ 2.36
CHPF2-203ENST00000482173 MED1Q15648 1581 aaPredicted RBP29.75■■■□□ 2.35
CHPF2-203ENST00000482173 TET3O43151 1660 aa29.73■■■□□ 2.35
CHPF2-203ENST00000482173 KCNA6P17658 529 aa29.73■■■□□ 2.35
CHPF2-203ENST00000482173 BCANQ96GW7 911 aa29.73■■■□□ 2.35
CHPF2-203ENST00000482173 XIRP1Q702N8 1843 aaKnown RBP29.73■■■□□ 2.35
CHPF2-203ENST00000482173 ROCK1Q13464 1354 aa29.7■■■□□ 2.35
CHPF2-203ENST00000482173 PPARGC1BQ86YN6 1023 aaKnown RBP29.69■■■□□ 2.34
CHPF2-203ENST00000482173 UNC13BO14795 1591 aa29.69■■■□□ 2.34
CHPF2-203ENST00000482173 TMEM94Q12767 1356 aa29.68■■■□□ 2.34
CHPF2-203ENST00000482173 ITGAEP38570 1179 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms